Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A445:A453
Extra
PDB:
ATOM 1 O3' C A 444 -58.003 -88.074 42.184 1.00 0.01 O
ATOM 2 P G A 445 -57.721 -89.535 41.636 1.00 0.01 P
ATOM 3 OP1 G A 445 -58.434 -89.666 40.385 1.00 0.01 O
ATOM 4 OP2 G A 445 -58.014 -90.484 42.709 1.00 0.01 O
ATOM 5 O5' G A 445 -56.196 -89.492 41.364 1.00 0.01 O
ATOM 6 C5' G A 445 -55.657 -88.498 40.543 1.00 0.01 C
ATOM 7 C4' G A 445 -54.164 -88.542 40.575 1.00 0.01 C
ATOM 8 O4' G A 445 -53.715 -88.387 41.949 1.00 0.01 O
ATOM 9 C3' G A 445 -53.557 -89.839 40.069 1.00 0.01 C
ATOM 10 O3' G A 445 -52.404 -89.562 39.293 1.00 0.01 O
ATOM 11 C2' G A 445 -53.166 -90.575 41.336 1.00 0.01 C
ATOM 12 O2' G A 445 -52.068 -91.432 41.183 1.00 0.01 O
ATOM 13 C1' G A 445 -52.856 -89.439 42.299 1.00 0.01 C
ATOM 14 N9 G A 445 -53.111 -89.794 43.691 1.00 0.01 N
ATOM 15 C8 G A 445 -54.311 -90.266 44.126 1.00 0.01 C
ATOM 16 N7 G A 445 -54.315 -90.583 45.372 1.00 0.01 N
ATOM 17 C5 G A 445 -53.034 -90.329 45.762 1.00 0.01 C
ATOM 18 C6 G A 445 -52.494 -90.517 47.016 1.00 0.01 C
ATOM 19 O6 G A 445 -53.153 -90.945 47.964 1.00 0.01 O
ATOM 20 N1 G A 445 -51.146 -90.169 47.075 1.00 0.01 N
ATOM 21 C2 G A 445 -50.440 -89.695 46.010 1.00 0.01 C
ATOM 22 N2 G A 445 -49.165 -89.405 46.221 1.00 0.01 N
ATOM 23 N3 G A 445 -50.938 -89.515 44.814 1.00 0.01 N
ATOM 24 C4 G A 445 -52.250 -89.851 44.762 1.00 0.01 C
ATOM 25 P A A 446 -52.432 -89.809 37.723 1.00 0.01 P
ATOM 26 OP1 A A 446 -53.833 -89.787 37.293 1.00 0.01 O
ATOM 27 OP2 A A 446 -51.639 -90.994 37.474 1.00 0.01 O
ATOM 28 O5' A A 446 -51.711 -88.545 37.175 1.00 0.01 O
TER
ATOM 1 O3' A B 452 -45.356 -79.104 39.775 1.00 0.01 O
ATOM 2 P A B 453 -45.884 -80.494 40.319 1.00 0.01 P
ATOM 3 OP1 A B 453 -46.276 -81.292 39.155 1.00 0.01 O
ATOM 4 OP2 A B 453 -46.874 -80.193 41.335 1.00 0.01 O
ATOM 5 O5' A B 453 -44.619 -81.115 40.988 1.00 0.01 O
ATOM 6 C5' A B 453 -44.265 -80.758 42.295 1.00 0.01 C
ATOM 7 C4' A B 453 -43.711 -81.932 43.007 1.00 0.01 C
ATOM 8 O4' A B 453 -44.804 -82.794 43.430 1.00 0.01 O
ATOM 9 C3' A B 453 -42.824 -82.798 42.144 1.00 0.01 C
ATOM 10 O3' A B 453 -41.829 -83.417 42.953 1.00 0.01 O
ATOM 11 C2' A B 453 -43.801 -83.850 41.634 1.00 0.01 C
ATOM 12 O2' A B 453 -43.209 -85.048 41.213 1.00 0.01 O
ATOM 13 C1' A B 453 -44.639 -84.070 42.856 1.00 0.01 C
ATOM 14 N9 A B 453 -45.945 -84.628 42.579 1.00 0.01 N
ATOM 15 C8 A B 453 -46.880 -84.169 41.699 1.00 0.01 C
ATOM 16 N7 A B 453 -47.974 -84.882 41.693 1.00 0.01 N
ATOM 17 C5 A B 453 -47.706 -85.865 42.627 1.00 0.01 C
ATOM 18 C6 A B 453 -48.472 -86.925 43.095 1.00 0.01 C
ATOM 19 N6 A B 453 -49.690 -87.113 42.605 1.00 0.01 N
ATOM 20 N1 A B 453 -47.974 -87.750 44.049 1.00 0.01 N
ATOM 21 C2 A B 453 -46.751 -87.496 44.497 1.00 0.01 C
ATOM 22 N3 A B 453 -45.930 -86.523 44.134 1.00 0.01 N
ATOM 23 C4 A B 453 -46.467 -85.735 43.185 1.00 0.01 C
ATOM 24 P C B 454 -40.663 -82.548 43.628 1.00 0.13 P
ATOM 25 OP1 C B 454 -39.982 -83.448 44.593 1.00 0.13 O
ATOM 26 OP2 C B 454 -41.253 -81.278 44.121 1.00 0.13 O
ATOM 27 O5' C B 454 -39.708 -82.258 42.403 1.00 0.13 O
TER
ATOM 2 P G A 445 -57.721 -89.535 41.636 1.00 0.01 P
ATOM 3 OP1 G A 445 -58.434 -89.666 40.385 1.00 0.01 O
ATOM 4 OP2 G A 445 -58.014 -90.484 42.709 1.00 0.01 O
ATOM 5 O5' G A 445 -56.196 -89.492 41.364 1.00 0.01 O
ATOM 6 C5' G A 445 -55.657 -88.498 40.543 1.00 0.01 C
ATOM 7 C4' G A 445 -54.164 -88.542 40.575 1.00 0.01 C
ATOM 8 O4' G A 445 -53.715 -88.387 41.949 1.00 0.01 O
ATOM 9 C3' G A 445 -53.557 -89.839 40.069 1.00 0.01 C
ATOM 10 O3' G A 445 -52.404 -89.562 39.293 1.00 0.01 O
ATOM 11 C2' G A 445 -53.166 -90.575 41.336 1.00 0.01 C
ATOM 12 O2' G A 445 -52.068 -91.432 41.183 1.00 0.01 O
ATOM 13 C1' G A 445 -52.856 -89.439 42.299 1.00 0.01 C
ATOM 14 N9 G A 445 -53.111 -89.794 43.691 1.00 0.01 N
ATOM 15 C8 G A 445 -54.311 -90.266 44.126 1.00 0.01 C
ATOM 16 N7 G A 445 -54.315 -90.583 45.372 1.00 0.01 N
ATOM 17 C5 G A 445 -53.034 -90.329 45.762 1.00 0.01 C
ATOM 18 C6 G A 445 -52.494 -90.517 47.016 1.00 0.01 C
ATOM 19 O6 G A 445 -53.153 -90.945 47.964 1.00 0.01 O
ATOM 20 N1 G A 445 -51.146 -90.169 47.075 1.00 0.01 N
ATOM 21 C2 G A 445 -50.440 -89.695 46.010 1.00 0.01 C
ATOM 22 N2 G A 445 -49.165 -89.405 46.221 1.00 0.01 N
ATOM 23 N3 G A 445 -50.938 -89.515 44.814 1.00 0.01 N
ATOM 24 C4 G A 445 -52.250 -89.851 44.762 1.00 0.01 C
ATOM 25 P A A 446 -52.432 -89.809 37.723 1.00 0.01 P
ATOM 26 OP1 A A 446 -53.833 -89.787 37.293 1.00 0.01 O
ATOM 27 OP2 A A 446 -51.639 -90.994 37.474 1.00 0.01 O
ATOM 28 O5' A A 446 -51.711 -88.545 37.175 1.00 0.01 O
TER
ATOM 1 O3' A B 452 -45.356 -79.104 39.775 1.00 0.01 O
ATOM 2 P A B 453 -45.884 -80.494 40.319 1.00 0.01 P
ATOM 3 OP1 A B 453 -46.276 -81.292 39.155 1.00 0.01 O
ATOM 4 OP2 A B 453 -46.874 -80.193 41.335 1.00 0.01 O
ATOM 5 O5' A B 453 -44.619 -81.115 40.988 1.00 0.01 O
ATOM 6 C5' A B 453 -44.265 -80.758 42.295 1.00 0.01 C
ATOM 7 C4' A B 453 -43.711 -81.932 43.007 1.00 0.01 C
ATOM 8 O4' A B 453 -44.804 -82.794 43.430 1.00 0.01 O
ATOM 9 C3' A B 453 -42.824 -82.798 42.144 1.00 0.01 C
ATOM 10 O3' A B 453 -41.829 -83.417 42.953 1.00 0.01 O
ATOM 11 C2' A B 453 -43.801 -83.850 41.634 1.00 0.01 C
ATOM 12 O2' A B 453 -43.209 -85.048 41.213 1.00 0.01 O
ATOM 13 C1' A B 453 -44.639 -84.070 42.856 1.00 0.01 C
ATOM 14 N9 A B 453 -45.945 -84.628 42.579 1.00 0.01 N
ATOM 15 C8 A B 453 -46.880 -84.169 41.699 1.00 0.01 C
ATOM 16 N7 A B 453 -47.974 -84.882 41.693 1.00 0.01 N
ATOM 17 C5 A B 453 -47.706 -85.865 42.627 1.00 0.01 C
ATOM 18 C6 A B 453 -48.472 -86.925 43.095 1.00 0.01 C
ATOM 19 N6 A B 453 -49.690 -87.113 42.605 1.00 0.01 N
ATOM 20 N1 A B 453 -47.974 -87.750 44.049 1.00 0.01 N
ATOM 21 C2 A B 453 -46.751 -87.496 44.497 1.00 0.01 C
ATOM 22 N3 A B 453 -45.930 -86.523 44.134 1.00 0.01 N
ATOM 23 C4 A B 453 -46.467 -85.735 43.185 1.00 0.01 C
ATOM 24 P C B 454 -40.663 -82.548 43.628 1.00 0.13 P
ATOM 25 OP1 C B 454 -39.982 -83.448 44.593 1.00 0.13 O
ATOM 26 OP2 C B 454 -41.253 -81.278 44.121 1.00 0.13 O
ATOM 27 O5' C B 454 -39.708 -82.258 42.403 1.00 0.13 O
TER
Atoms:
OP1: (-58.434,-89.666,40.385)
OP2: (-58.014,-90.484,42.709)
C3': (-53.557,-89.839,40.069)
C1': (-52.856,-89.439,42.299)
C5': (-55.657,-88.498,40.543)
O6: (-53.153,-90.945,47.964)
O4': (-53.715,-88.387,41.949)
C8: (-54.311,-90.266,44.126)
C2: (-50.440,-89.695,46.010)
C6: (-52.494,-90.517,47.016)
C5: (-53.034,-90.329,45.762)
C4: (-52.250,-89.851,44.762)
P: (-57.721,-89.535,41.636)
C4': (-54.164,-88.542,40.575)
C2': (-53.166,-90.575,41.336)
O2': (-52.068,-91.432,41.183)
N1: (-51.146,-90.169,47.075)
N2: (-49.165,-89.405,46.221)
N3: (-50.938,-89.515,44.814)
N7: (-54.315,-90.583,45.372)
N9: (-53.111,-89.794,43.691)
O5': (-56.196,-89.492,41.364)
O3': (-52.404,-89.562,39.293)
OP2: (-58.014,-90.484,42.709)
C3': (-53.557,-89.839,40.069)
C1': (-52.856,-89.439,42.299)
C5': (-55.657,-88.498,40.543)
O6: (-53.153,-90.945,47.964)
O4': (-53.715,-88.387,41.949)
C8: (-54.311,-90.266,44.126)
C2: (-50.440,-89.695,46.010)
C6: (-52.494,-90.517,47.016)
C5: (-53.034,-90.329,45.762)
C4: (-52.250,-89.851,44.762)
P: (-57.721,-89.535,41.636)
C4': (-54.164,-88.542,40.575)
C2': (-53.166,-90.575,41.336)
O2': (-52.068,-91.432,41.183)
N1: (-51.146,-90.169,47.075)
N2: (-49.165,-89.405,46.221)
N3: (-50.938,-89.515,44.814)
N7: (-54.315,-90.583,45.372)
N9: (-53.111,-89.794,43.691)
O5': (-56.196,-89.492,41.364)
O3': (-52.404,-89.562,39.293)
OP1: (-46.276,-81.292,39.155)
OP2: (-46.874,-80.193,41.335)
C3': (-42.824,-82.798,42.144)
C1': (-44.639,-84.070,42.856)
C5': (-44.265,-80.758,42.295)
O4': (-44.804,-82.794,43.430)
C8: (-46.880,-84.169,41.699)
O2': (-43.209,-85.048,41.213)
C6: (-48.472,-86.925,43.095)
C5: (-47.706,-85.865,42.627)
C4: (-46.467,-85.735,43.185)
P: (-45.884,-80.494,40.319)
C4': (-43.711,-81.932,43.007)
C2': (-43.801,-83.850,41.634)
C2: (-46.751,-87.496,44.497)
N1: (-47.974,-87.750,44.049)
N3: (-45.930,-86.523,44.134)
N6: (-49.690,-87.113,42.605)
N7: (-47.974,-84.882,41.693)
N9: (-45.945,-84.628,42.579)
O5': (-44.619,-81.115,40.988)
O3': (-41.829,-83.417,42.953)
OP2: (-46.874,-80.193,41.335)
C3': (-42.824,-82.798,42.144)
C1': (-44.639,-84.070,42.856)
C5': (-44.265,-80.758,42.295)
O4': (-44.804,-82.794,43.430)
C8: (-46.880,-84.169,41.699)
O2': (-43.209,-85.048,41.213)
C6: (-48.472,-86.925,43.095)
C5: (-47.706,-85.865,42.627)
C4: (-46.467,-85.735,43.185)
P: (-45.884,-80.494,40.319)
C4': (-43.711,-81.932,43.007)
C2': (-43.801,-83.850,41.634)
C2: (-46.751,-87.496,44.497)
N1: (-47.974,-87.750,44.049)
N3: (-45.930,-86.523,44.134)
N6: (-49.690,-87.113,42.605)
N7: (-47.974,-84.882,41.693)
N9: (-45.945,-84.628,42.579)
O5': (-44.619,-81.115,40.988)
O3': (-41.829,-83.417,42.953)
Image (generated by PyMOL):