Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:17:11502
Extra
PDB:
ATOM 1 O3' U A 6 32.875 -26.517 148.918 1.00 65.48 O
ATOM 2 P C A 7 33.791 -25.397 148.191 1.00 65.47 P
ATOM 3 OP1 C A 7 33.588 -25.597 146.698 1.00 64.73 O
ATOM 4 OP2 C A 7 35.161 -25.512 148.761 1.00 65.81 O
ATOM 5 O5' C A 7 33.139 -24.011 148.672 1.00 65.61 O
ATOM 6 C5' C A 7 31.909 -23.573 148.134 1.00 65.28 C
ATOM 7 C4' C A 7 31.407 -22.322 148.805 1.00 65.54 C
ATOM 8 O4' C A 7 31.310 -22.527 150.226 1.00 66.29 O
ATOM 9 C3' C A 7 32.267 -21.084 148.680 1.00 65.43 C
ATOM 10 O3' C A 7 32.129 -20.440 147.436 1.00 64.77 O
ATOM 11 C2' C A 7 31.772 -20.233 149.832 1.00 65.98 C
ATOM 12 O2' C A 7 30.566 -19.569 149.478 1.00 65.76 O
ATOM 13 C1' C A 7 31.474 -21.296 150.894 1.00 66.58 C
ATOM 14 N1 C A 7 32.582 -21.428 151.833 1.00 67.11 N
ATOM 15 C2 C A 7 32.632 -20.528 152.858 1.00 67.62 C
ATOM 16 O2 C A 7 31.716 -19.702 152.932 1.00 67.61 O
ATOM 17 N3 C A 7 33.672 -20.601 153.715 1.00 68.12 N
ATOM 18 C4 C A 7 34.627 -21.515 153.522 1.00 68.08 C
ATOM 19 N4 C A 7 35.643 -21.566 154.367 1.00 68.59 N
ATOM 20 C5 C A 7 34.596 -22.443 152.456 1.00 67.55 C
ATOM 21 C6 C A 7 33.553 -22.356 151.637 1.00 67.07 C
ATOM 22 P A A 8 33.170 -19.298 147.034 1.00 68.22 P
ATOM 23 OP1 A A 8 33.023 -19.042 145.573 1.00 67.48 O
ATOM 24 OP2 A A 8 34.499 -19.721 147.568 1.00 68.54 O
ATOM 25 O5' A A 8 32.649 -18.053 147.848 1.00 68.59 O
TER
ATOM 1 O3' A B1501 25.361 -13.444 145.400 1.00 90.10 O
ATOM 2 P A B1502 25.288 -14.756 146.336 1.00 62.82 P
ATOM 3 OP1 A B1502 26.584 -15.452 146.227 1.00 62.86 O
ATOM 4 OP2 A B1502 24.043 -15.497 145.978 1.00 62.38 O
ATOM 5 O5' A B1502 25.149 -14.142 147.782 1.00 63.49 O
ATOM 6 C5' A B1502 24.438 -12.936 147.999 1.00 63.65 C
ATOM 7 C4' A B1502 25.027 -12.201 149.147 1.00 64.32 C
ATOM 8 O4' A B1502 25.587 -13.199 150.053 1.00 64.63 O
ATOM 9 C3' A B1502 26.178 -11.278 148.762 1.00 64.48 C
ATOM 10 O3' A B1502 26.238 -10.159 149.653 1.00 65.02 O
ATOM 11 C2' A B1502 27.383 -12.184 148.965 1.00 64.60 C
ATOM 12 O2' A B1502 28.615 -11.525 149.148 1.00 64.96 O
ATOM 13 C1' A B1502 26.966 -12.968 150.201 1.00 64.93 C
ATOM 14 N9 A B1502 27.679 -14.246 150.351 1.00 64.91 N
ATOM 15 C8 A B1502 27.962 -15.156 149.376 1.00 64.41 C
ATOM 16 N7 A B1502 28.723 -16.153 149.766 1.00 64.54 N
ATOM 17 C5 A B1502 28.979 -15.881 151.087 1.00 65.17 C
ATOM 18 C6 A B1502 29.708 -16.573 152.053 1.00 65.58 C
ATOM 19 N6 A B1502 30.335 -17.727 151.845 1.00 65.42 N
ATOM 20 N1 A B1502 29.763 -16.024 153.280 1.00 66.18 N
ATOM 21 C2 A B1502 29.129 -14.876 153.520 1.00 66.35 C
ATOM 22 N3 A B1502 28.418 -14.142 152.685 1.00 66.01 N
ATOM 23 C4 A B1502 28.367 -14.702 151.464 1.00 65.41 C
ATOM 24 P A B1503 25.743 -8.699 149.168 1.00 79.08 P
ATOM 25 OP1 A B1503 25.827 -7.794 150.321 1.00 79.71 O
ATOM 26 OP2 A B1503 24.449 -8.872 148.512 1.00 78.59 O
ATOM 27 O5' A B1503 26.828 -8.300 148.091 1.00 78.86 O
TER
ATOM 2 P C A 7 33.791 -25.397 148.191 1.00 65.47 P
ATOM 3 OP1 C A 7 33.588 -25.597 146.698 1.00 64.73 O
ATOM 4 OP2 C A 7 35.161 -25.512 148.761 1.00 65.81 O
ATOM 5 O5' C A 7 33.139 -24.011 148.672 1.00 65.61 O
ATOM 6 C5' C A 7 31.909 -23.573 148.134 1.00 65.28 C
ATOM 7 C4' C A 7 31.407 -22.322 148.805 1.00 65.54 C
ATOM 8 O4' C A 7 31.310 -22.527 150.226 1.00 66.29 O
ATOM 9 C3' C A 7 32.267 -21.084 148.680 1.00 65.43 C
ATOM 10 O3' C A 7 32.129 -20.440 147.436 1.00 64.77 O
ATOM 11 C2' C A 7 31.772 -20.233 149.832 1.00 65.98 C
ATOM 12 O2' C A 7 30.566 -19.569 149.478 1.00 65.76 O
ATOM 13 C1' C A 7 31.474 -21.296 150.894 1.00 66.58 C
ATOM 14 N1 C A 7 32.582 -21.428 151.833 1.00 67.11 N
ATOM 15 C2 C A 7 32.632 -20.528 152.858 1.00 67.62 C
ATOM 16 O2 C A 7 31.716 -19.702 152.932 1.00 67.61 O
ATOM 17 N3 C A 7 33.672 -20.601 153.715 1.00 68.12 N
ATOM 18 C4 C A 7 34.627 -21.515 153.522 1.00 68.08 C
ATOM 19 N4 C A 7 35.643 -21.566 154.367 1.00 68.59 N
ATOM 20 C5 C A 7 34.596 -22.443 152.456 1.00 67.55 C
ATOM 21 C6 C A 7 33.553 -22.356 151.637 1.00 67.07 C
ATOM 22 P A A 8 33.170 -19.298 147.034 1.00 68.22 P
ATOM 23 OP1 A A 8 33.023 -19.042 145.573 1.00 67.48 O
ATOM 24 OP2 A A 8 34.499 -19.721 147.568 1.00 68.54 O
ATOM 25 O5' A A 8 32.649 -18.053 147.848 1.00 68.59 O
TER
ATOM 1 O3' A B1501 25.361 -13.444 145.400 1.00 90.10 O
ATOM 2 P A B1502 25.288 -14.756 146.336 1.00 62.82 P
ATOM 3 OP1 A B1502 26.584 -15.452 146.227 1.00 62.86 O
ATOM 4 OP2 A B1502 24.043 -15.497 145.978 1.00 62.38 O
ATOM 5 O5' A B1502 25.149 -14.142 147.782 1.00 63.49 O
ATOM 6 C5' A B1502 24.438 -12.936 147.999 1.00 63.65 C
ATOM 7 C4' A B1502 25.027 -12.201 149.147 1.00 64.32 C
ATOM 8 O4' A B1502 25.587 -13.199 150.053 1.00 64.63 O
ATOM 9 C3' A B1502 26.178 -11.278 148.762 1.00 64.48 C
ATOM 10 O3' A B1502 26.238 -10.159 149.653 1.00 65.02 O
ATOM 11 C2' A B1502 27.383 -12.184 148.965 1.00 64.60 C
ATOM 12 O2' A B1502 28.615 -11.525 149.148 1.00 64.96 O
ATOM 13 C1' A B1502 26.966 -12.968 150.201 1.00 64.93 C
ATOM 14 N9 A B1502 27.679 -14.246 150.351 1.00 64.91 N
ATOM 15 C8 A B1502 27.962 -15.156 149.376 1.00 64.41 C
ATOM 16 N7 A B1502 28.723 -16.153 149.766 1.00 64.54 N
ATOM 17 C5 A B1502 28.979 -15.881 151.087 1.00 65.17 C
ATOM 18 C6 A B1502 29.708 -16.573 152.053 1.00 65.58 C
ATOM 19 N6 A B1502 30.335 -17.727 151.845 1.00 65.42 N
ATOM 20 N1 A B1502 29.763 -16.024 153.280 1.00 66.18 N
ATOM 21 C2 A B1502 29.129 -14.876 153.520 1.00 66.35 C
ATOM 22 N3 A B1502 28.418 -14.142 152.685 1.00 66.01 N
ATOM 23 C4 A B1502 28.367 -14.702 151.464 1.00 65.41 C
ATOM 24 P A B1503 25.743 -8.699 149.168 1.00 79.08 P
ATOM 25 OP1 A B1503 25.827 -7.794 150.321 1.00 79.71 O
ATOM 26 OP2 A B1503 24.449 -8.872 148.512 1.00 78.59 O
ATOM 27 O5' A B1503 26.828 -8.300 148.091 1.00 78.86 O
TER
Atoms:
C2: (32.632,-20.528,152.858)
OP1: (33.588,-25.597,146.698)
OP2: (35.161,-25.512,148.761)
C4: (34.627,-21.515,153.522)
O5': (33.139,-24.011,148.672)
C3': (32.267,-21.084,148.680)
C1': (31.474,-21.296,150.894)
O4': (31.310,-22.527,150.226)
C5': (31.909,-23.573,148.134)
P: (33.791,-25.397,148.191)
O2: (31.716,-19.702,152.932)
C4': (31.407,-22.322,148.805)
C2': (31.772,-20.233,149.832)
O2': (30.566,-19.569,149.478)
N1: (32.582,-21.428,151.833)
N3: (33.672,-20.601,153.715)
N4: (35.643,-21.566,154.367)
C6: (33.553,-22.356,151.637)
C5: (34.596,-22.443,152.456)
O3': (32.129,-20.440,147.436)
OP1: (33.588,-25.597,146.698)
OP2: (35.161,-25.512,148.761)
C4: (34.627,-21.515,153.522)
O5': (33.139,-24.011,148.672)
C3': (32.267,-21.084,148.680)
C1': (31.474,-21.296,150.894)
O4': (31.310,-22.527,150.226)
C5': (31.909,-23.573,148.134)
P: (33.791,-25.397,148.191)
O2: (31.716,-19.702,152.932)
C4': (31.407,-22.322,148.805)
C2': (31.772,-20.233,149.832)
O2': (30.566,-19.569,149.478)
N1: (32.582,-21.428,151.833)
N3: (33.672,-20.601,153.715)
N4: (35.643,-21.566,154.367)
C6: (33.553,-22.356,151.637)
C5: (34.596,-22.443,152.456)
O3': (32.129,-20.440,147.436)
OP1: (26.584,-15.452,146.227)
OP2: (24.043,-15.497,145.978)
C3': (26.178,-11.278,148.762)
C1': (26.966,-12.968,150.201)
C5': (24.438,-12.936,147.999)
O4': (25.587,-13.199,150.053)
C8: (27.962,-15.156,149.376)
O2': (28.615,-11.525,149.148)
C6: (29.708,-16.573,152.053)
C5: (28.979,-15.881,151.087)
C4: (28.367,-14.702,151.464)
P: (25.288,-14.756,146.336)
C4': (25.027,-12.201,149.147)
C2': (27.383,-12.184,148.965)
C2: (29.129,-14.876,153.520)
N1: (29.763,-16.024,153.280)
N3: (28.418,-14.142,152.685)
N6: (30.335,-17.727,151.845)
N7: (28.723,-16.153,149.766)
N9: (27.679,-14.246,150.351)
O5': (25.149,-14.142,147.782)
O3': (26.238,-10.159,149.653)
OP2: (24.043,-15.497,145.978)
C3': (26.178,-11.278,148.762)
C1': (26.966,-12.968,150.201)
C5': (24.438,-12.936,147.999)
O4': (25.587,-13.199,150.053)
C8: (27.962,-15.156,149.376)
O2': (28.615,-11.525,149.148)
C6: (29.708,-16.573,152.053)
C5: (28.979,-15.881,151.087)
C4: (28.367,-14.702,151.464)
P: (25.288,-14.756,146.336)
C4': (25.027,-12.201,149.147)
C2': (27.383,-12.184,148.965)
C2: (29.129,-14.876,153.520)
N1: (29.763,-16.024,153.280)
N3: (28.418,-14.142,152.685)
N6: (30.335,-17.727,151.845)
N7: (28.723,-16.153,149.766)
N9: (27.679,-14.246,150.351)
O5': (25.149,-14.142,147.782)
O3': (26.238,-10.159,149.653)
Image (generated by PyMOL):