Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A440:A448
Extra
PDB:
ATOM 1 O3' C A 439 36.613 126.259 55.757 1.00 27.76 O
ATOM 2 P G A 440 35.202 126.761 56.249 1.00 27.27 P
ATOM 3 OP1 G A 440 35.195 126.678 57.718 1.00 25.94 O
ATOM 4 OP2 G A 440 34.191 126.012 55.459 1.00 29.11 O
ATOM 5 O5' G A 440 35.212 128.296 55.829 1.00 26.42 O
ATOM 6 C5' G A 440 36.074 129.226 56.498 1.00 31.05 C
ATOM 7 C4' G A 440 35.895 130.607 55.943 1.00 34.11 C
ATOM 8 O4' G A 440 36.058 130.538 54.502 1.00 36.31 O
ATOM 9 C3' G A 440 34.525 131.223 56.191 1.00 35.36 C
ATOM 10 O3' G A 440 34.672 132.620 56.410 1.00 34.36 O
ATOM 11 C2' G A 440 33.780 130.947 54.892 1.00 37.23 C
ATOM 12 O2' G A 440 32.735 131.877 54.634 1.00 38.95 O
ATOM 13 C1' G A 440 34.912 131.069 53.874 1.00 37.20 C
ATOM 14 N9 G A 440 34.673 130.330 52.642 1.00 37.64 N
ATOM 15 C8 G A 440 34.356 129.004 52.521 1.00 38.33 C
ATOM 16 N7 G A 440 34.124 128.644 51.291 1.00 36.46 N
ATOM 17 C5 G A 440 34.307 129.802 50.556 1.00 36.21 C
ATOM 18 C6 G A 440 34.155 130.040 49.179 1.00 35.17 C
ATOM 19 O6 G A 440 33.778 129.269 48.306 1.00 36.44 O
ATOM 20 N1 G A 440 34.473 131.346 48.849 1.00 34.81 N
ATOM 21 C2 G A 440 34.859 132.316 49.736 1.00 36.12 C
ATOM 22 N2 G A 440 35.134 133.524 49.221 1.00 35.72 N
ATOM 23 N3 G A 440 34.969 132.117 51.035 1.00 37.65 N
ATOM 24 C4 G A 440 34.682 130.843 51.372 1.00 37.13 C
ATOM 25 P A A 441 34.487 133.191 57.890 1.00 34.97 P
ATOM 26 OP1 A A 441 34.588 132.006 58.756 1.00 35.73 O
ATOM 27 OP2 A A 441 33.291 134.050 57.979 1.00 35.74 O
ATOM 28 O5' A A 441 35.789 134.058 58.142 1.00 33.52 O
TER
ATOM 1 O3' A B 447 45.764 138.794 53.455 1.00 34.93 O
ATOM 2 P A B 448 44.355 138.032 53.292 1.00 38.43 P
ATOM 3 OP1 A B 448 43.675 137.988 54.594 1.00 38.03 O
ATOM 4 OP2 A B 448 44.630 136.760 52.563 1.00 36.70 O
ATOM 5 O5' A B 448 43.504 139.001 52.364 1.00 38.54 O
ATOM 6 C5' A B 448 43.951 139.299 51.033 1.00 38.21 C
ATOM 7 C4' A B 448 42.794 139.740 50.186 1.00 39.07 C
ATOM 8 O4' A B 448 41.811 138.680 50.094 1.00 38.97 O
ATOM 9 C3' A B 448 42.039 140.970 50.664 1.00 38.86 C
ATOM 10 O3' A B 448 41.608 141.625 49.495 1.00 37.38 O
ATOM 11 C2' A B 448 40.847 140.384 51.403 1.00 39.48 C
ATOM 12 O2' A B 448 39.734 141.261 51.420 1.00 39.81 O
ATOM 13 C1' A B 448 40.556 139.163 50.537 1.00 39.64 C
ATOM 14 N9 A B 448 39.905 138.078 51.245 1.00 38.74 N
ATOM 15 C8 A B 448 40.237 137.523 52.446 1.00 38.99 C
ATOM 16 N7 A B 448 39.529 136.472 52.748 1.00 39.71 N
ATOM 17 C5 A B 448 38.649 136.349 51.687 1.00 39.54 C
ATOM 18 C6 A B 448 37.649 135.415 51.400 1.00 39.73 C
ATOM 19 N6 A B 448 37.359 134.381 52.192 1.00 39.37 N
ATOM 20 N1 A B 448 36.953 135.578 50.261 1.00 39.95 N
ATOM 21 C2 A B 448 37.256 136.617 49.474 1.00 40.04 C
ATOM 22 N3 A B 448 38.180 137.557 49.636 1.00 39.21 N
ATOM 23 C4 A B 448 38.851 137.355 50.774 1.00 39.01 C
ATOM 24 P C B 449 42.502 142.795 48.902 1.00 36.08 P
ATOM 25 OP1 C B 449 41.821 143.291 47.689 1.00 37.01 O
ATOM 26 OP2 C B 449 43.899 142.302 48.819 1.00 36.37 O
ATOM 27 O5' C B 449 42.412 143.891 50.044 1.00 36.53 O
TER
ATOM 2 P G A 440 35.202 126.761 56.249 1.00 27.27 P
ATOM 3 OP1 G A 440 35.195 126.678 57.718 1.00 25.94 O
ATOM 4 OP2 G A 440 34.191 126.012 55.459 1.00 29.11 O
ATOM 5 O5' G A 440 35.212 128.296 55.829 1.00 26.42 O
ATOM 6 C5' G A 440 36.074 129.226 56.498 1.00 31.05 C
ATOM 7 C4' G A 440 35.895 130.607 55.943 1.00 34.11 C
ATOM 8 O4' G A 440 36.058 130.538 54.502 1.00 36.31 O
ATOM 9 C3' G A 440 34.525 131.223 56.191 1.00 35.36 C
ATOM 10 O3' G A 440 34.672 132.620 56.410 1.00 34.36 O
ATOM 11 C2' G A 440 33.780 130.947 54.892 1.00 37.23 C
ATOM 12 O2' G A 440 32.735 131.877 54.634 1.00 38.95 O
ATOM 13 C1' G A 440 34.912 131.069 53.874 1.00 37.20 C
ATOM 14 N9 G A 440 34.673 130.330 52.642 1.00 37.64 N
ATOM 15 C8 G A 440 34.356 129.004 52.521 1.00 38.33 C
ATOM 16 N7 G A 440 34.124 128.644 51.291 1.00 36.46 N
ATOM 17 C5 G A 440 34.307 129.802 50.556 1.00 36.21 C
ATOM 18 C6 G A 440 34.155 130.040 49.179 1.00 35.17 C
ATOM 19 O6 G A 440 33.778 129.269 48.306 1.00 36.44 O
ATOM 20 N1 G A 440 34.473 131.346 48.849 1.00 34.81 N
ATOM 21 C2 G A 440 34.859 132.316 49.736 1.00 36.12 C
ATOM 22 N2 G A 440 35.134 133.524 49.221 1.00 35.72 N
ATOM 23 N3 G A 440 34.969 132.117 51.035 1.00 37.65 N
ATOM 24 C4 G A 440 34.682 130.843 51.372 1.00 37.13 C
ATOM 25 P A A 441 34.487 133.191 57.890 1.00 34.97 P
ATOM 26 OP1 A A 441 34.588 132.006 58.756 1.00 35.73 O
ATOM 27 OP2 A A 441 33.291 134.050 57.979 1.00 35.74 O
ATOM 28 O5' A A 441 35.789 134.058 58.142 1.00 33.52 O
TER
ATOM 1 O3' A B 447 45.764 138.794 53.455 1.00 34.93 O
ATOM 2 P A B 448 44.355 138.032 53.292 1.00 38.43 P
ATOM 3 OP1 A B 448 43.675 137.988 54.594 1.00 38.03 O
ATOM 4 OP2 A B 448 44.630 136.760 52.563 1.00 36.70 O
ATOM 5 O5' A B 448 43.504 139.001 52.364 1.00 38.54 O
ATOM 6 C5' A B 448 43.951 139.299 51.033 1.00 38.21 C
ATOM 7 C4' A B 448 42.794 139.740 50.186 1.00 39.07 C
ATOM 8 O4' A B 448 41.811 138.680 50.094 1.00 38.97 O
ATOM 9 C3' A B 448 42.039 140.970 50.664 1.00 38.86 C
ATOM 10 O3' A B 448 41.608 141.625 49.495 1.00 37.38 O
ATOM 11 C2' A B 448 40.847 140.384 51.403 1.00 39.48 C
ATOM 12 O2' A B 448 39.734 141.261 51.420 1.00 39.81 O
ATOM 13 C1' A B 448 40.556 139.163 50.537 1.00 39.64 C
ATOM 14 N9 A B 448 39.905 138.078 51.245 1.00 38.74 N
ATOM 15 C8 A B 448 40.237 137.523 52.446 1.00 38.99 C
ATOM 16 N7 A B 448 39.529 136.472 52.748 1.00 39.71 N
ATOM 17 C5 A B 448 38.649 136.349 51.687 1.00 39.54 C
ATOM 18 C6 A B 448 37.649 135.415 51.400 1.00 39.73 C
ATOM 19 N6 A B 448 37.359 134.381 52.192 1.00 39.37 N
ATOM 20 N1 A B 448 36.953 135.578 50.261 1.00 39.95 N
ATOM 21 C2 A B 448 37.256 136.617 49.474 1.00 40.04 C
ATOM 22 N3 A B 448 38.180 137.557 49.636 1.00 39.21 N
ATOM 23 C4 A B 448 38.851 137.355 50.774 1.00 39.01 C
ATOM 24 P C B 449 42.502 142.795 48.902 1.00 36.08 P
ATOM 25 OP1 C B 449 41.821 143.291 47.689 1.00 37.01 O
ATOM 26 OP2 C B 449 43.899 142.302 48.819 1.00 36.37 O
ATOM 27 O5' C B 449 42.412 143.891 50.044 1.00 36.53 O
TER
Atoms:
OP1: (35.195,126.678,57.718)
OP2: (34.191,126.012,55.459)
C3': (34.525,131.223,56.191)
C1': (34.912,131.069,53.874)
C5': (36.074,129.226,56.498)
O6: (33.778,129.269,48.306)
O4': (36.058,130.538,54.502)
C8: (34.356,129.004,52.521)
C2: (34.859,132.316,49.736)
C6: (34.155,130.040,49.179)
C5: (34.307,129.802,50.556)
C4: (34.682,130.843,51.372)
P: (35.202,126.761,56.249)
C4': (35.895,130.607,55.943)
C2': (33.780,130.947,54.892)
O2': (32.735,131.877,54.634)
N1: (34.473,131.346,48.849)
N2: (35.134,133.524,49.221)
N3: (34.969,132.117,51.035)
N7: (34.124,128.644,51.291)
N9: (34.673,130.330,52.642)
O5': (35.212,128.296,55.829)
O3': (34.672,132.620,56.410)
OP2: (34.191,126.012,55.459)
C3': (34.525,131.223,56.191)
C1': (34.912,131.069,53.874)
C5': (36.074,129.226,56.498)
O6: (33.778,129.269,48.306)
O4': (36.058,130.538,54.502)
C8: (34.356,129.004,52.521)
C2: (34.859,132.316,49.736)
C6: (34.155,130.040,49.179)
C5: (34.307,129.802,50.556)
C4: (34.682,130.843,51.372)
P: (35.202,126.761,56.249)
C4': (35.895,130.607,55.943)
C2': (33.780,130.947,54.892)
O2': (32.735,131.877,54.634)
N1: (34.473,131.346,48.849)
N2: (35.134,133.524,49.221)
N3: (34.969,132.117,51.035)
N7: (34.124,128.644,51.291)
N9: (34.673,130.330,52.642)
O5': (35.212,128.296,55.829)
O3': (34.672,132.620,56.410)
OP1: (43.675,137.988,54.594)
OP2: (44.630,136.760,52.563)
C3': (42.039,140.970,50.664)
C1': (40.556,139.163,50.537)
C5': (43.951,139.299,51.033)
O4': (41.811,138.680,50.094)
C8: (40.237,137.523,52.446)
O2': (39.734,141.261,51.420)
C6: (37.649,135.415,51.400)
C5: (38.649,136.349,51.687)
C4: (38.851,137.355,50.774)
P: (44.355,138.032,53.292)
C4': (42.794,139.740,50.186)
C2': (40.847,140.384,51.403)
C2: (37.256,136.617,49.474)
N1: (36.953,135.578,50.261)
N3: (38.180,137.557,49.636)
N6: (37.359,134.381,52.192)
N7: (39.529,136.472,52.748)
N9: (39.905,138.078,51.245)
O5': (43.504,139.001,52.364)
O3': (41.608,141.625,49.495)
OP2: (44.630,136.760,52.563)
C3': (42.039,140.970,50.664)
C1': (40.556,139.163,50.537)
C5': (43.951,139.299,51.033)
O4': (41.811,138.680,50.094)
C8: (40.237,137.523,52.446)
O2': (39.734,141.261,51.420)
C6: (37.649,135.415,51.400)
C5: (38.649,136.349,51.687)
C4: (38.851,137.355,50.774)
P: (44.355,138.032,53.292)
C4': (42.794,139.740,50.186)
C2': (40.847,140.384,51.403)
C2: (37.256,136.617,49.474)
N1: (36.953,135.578,50.261)
N3: (38.180,137.557,49.636)
N6: (37.359,134.381,52.192)
N7: (39.529,136.472,52.748)
N9: (39.905,138.078,51.245)
O5': (43.504,139.001,52.364)
O3': (41.608,141.625,49.495)
Image (generated by PyMOL):