Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3IVN:B32:B9
Extra
PDB:
ATOM 1 O3' G A 31 -38.693 2.256 8.685 1.00 37.86 O
ATOM 2 P G A 32 -39.013 3.340 9.826 1.00 37.69 P
ATOM 3 OP1 G A 32 -40.486 3.349 10.019 1.00 36.25 O
ATOM 4 OP2 G A 32 -38.332 4.579 9.375 1.00 37.36 O
ATOM 5 O5' G A 32 -38.293 2.740 11.113 1.00 34.79 O
ATOM 6 C5' G A 32 -38.749 1.526 11.710 1.00 34.10 C
ATOM 7 C4' G A 32 -37.819 1.099 12.815 1.00 33.88 C
ATOM 8 O4' G A 32 -36.485 0.896 12.285 1.00 34.25 O
ATOM 9 C3' G A 32 -37.629 2.092 13.950 1.00 33.18 C
ATOM 10 O3' G A 32 -38.676 2.017 14.901 1.00 32.37 O
ATOM 11 C2' G A 32 -36.273 1.683 14.515 1.00 31.90 C
ATOM 12 O2' G A 32 -36.433 0.531 15.331 1.00 31.68 O
ATOM 13 C1' G A 32 -35.521 1.269 13.249 1.00 33.00 C
ATOM 14 N9 G A 32 -34.656 2.334 12.689 1.00 32.74 N
ATOM 15 C8 G A 32 -34.985 3.255 11.725 1.00 33.76 C
ATOM 16 N7 G A 32 -34.002 4.063 11.429 1.00 33.21 N
ATOM 17 C5 G A 32 -32.956 3.647 12.241 1.00 32.11 C
ATOM 18 C6 G A 32 -31.632 4.145 12.364 1.00 31.32 C
ATOM 19 O6 G A 32 -31.097 5.083 11.760 1.00 31.13 O
ATOM 20 N1 G A 32 -30.903 3.428 13.307 1.00 30.12 N
ATOM 21 C2 G A 32 -31.383 2.371 14.037 1.00 30.04 C
ATOM 22 N2 G A 32 -30.523 1.810 14.898 1.00 29.22 N
ATOM 23 N3 G A 32 -32.614 1.899 13.931 1.00 31.01 N
ATOM 24 C4 G A 32 -33.342 2.578 13.020 1.00 31.82 C
ATOM 25 P U A 33 -39.778 3.179 15.017 1.00 31.42 P
ATOM 26 OP1 U A 33 -40.732 2.726 16.059 1.00 30.88 O
ATOM 27 OP2 U A 33 -40.272 3.440 13.645 1.00 33.00 O
ATOM 28 O5' U A 33 -38.932 4.426 15.530 1.00 32.29 O
TER
ATOM 1 O3' U B 8 -33.535 -0.428 22.853 1.00 27.73 O
ATOM 2 P A B 9 -32.116 -0.606 23.573 1.00 30.27 P
ATOM 3 OP1 A B 9 -32.647 -1.243 24.798 1.00 29.33 O
ATOM 4 OP2 A B 9 -31.291 0.617 23.718 1.00 30.13 O
ATOM 5 O5' A B 9 -31.451 -1.723 22.651 1.00 28.26 O
ATOM 6 C5' A B 9 -31.343 -3.047 23.151 1.00 27.53 C
ATOM 7 C4' A B 9 -31.202 -4.030 22.018 1.00 28.33 C
ATOM 8 O4' A B 9 -32.406 -4.051 21.210 1.00 28.74 O
ATOM 9 C3' A B 9 -30.073 -3.803 21.025 1.00 27.48 C
ATOM 10 O3' A B 9 -28.845 -4.295 21.520 1.00 26.73 O
ATOM 11 C2' A B 9 -30.559 -4.598 19.815 1.00 28.41 C
ATOM 12 O2' A B 9 -30.300 -5.979 20.016 1.00 29.02 O
ATOM 13 C1' A B 9 -32.073 -4.391 19.876 1.00 28.41 C
ATOM 14 N9 A B 9 -32.625 -3.404 18.914 1.00 28.60 N
ATOM 15 C8 A B 9 -33.918 -3.381 18.450 1.00 28.91 C
ATOM 16 N7 A B 9 -34.176 -2.421 17.599 1.00 29.20 N
ATOM 17 C5 A B 9 -32.961 -1.763 17.485 1.00 28.95 C
ATOM 18 C6 A B 9 -32.572 -0.647 16.730 1.00 28.59 C
ATOM 19 N6 A B 9 -33.398 0.017 15.922 1.00 29.21 N
ATOM 20 N1 A B 9 -31.293 -0.233 16.834 1.00 28.68 N
ATOM 21 C2 A B 9 -30.467 -0.901 17.646 1.00 28.71 C
ATOM 22 N3 A B 9 -30.715 -1.963 18.407 1.00 28.83 N
ATOM 23 C4 A B 9 -31.995 -2.353 18.285 1.00 28.91 C
ATOM 24 P A B 10 -27.644 -3.329 21.969 1.00 27.01 P
ATOM 25 OP1 A B 10 -26.798 -4.143 22.874 1.00 25.61 O
ATOM 26 OP2 A B 10 -28.242 -2.072 22.483 1.00 27.64 O
ATOM 27 O5' A B 10 -26.864 -3.046 20.611 1.00 26.58 O
TER
ATOM 2 P G A 32 -39.013 3.340 9.826 1.00 37.69 P
ATOM 3 OP1 G A 32 -40.486 3.349 10.019 1.00 36.25 O
ATOM 4 OP2 G A 32 -38.332 4.579 9.375 1.00 37.36 O
ATOM 5 O5' G A 32 -38.293 2.740 11.113 1.00 34.79 O
ATOM 6 C5' G A 32 -38.749 1.526 11.710 1.00 34.10 C
ATOM 7 C4' G A 32 -37.819 1.099 12.815 1.00 33.88 C
ATOM 8 O4' G A 32 -36.485 0.896 12.285 1.00 34.25 O
ATOM 9 C3' G A 32 -37.629 2.092 13.950 1.00 33.18 C
ATOM 10 O3' G A 32 -38.676 2.017 14.901 1.00 32.37 O
ATOM 11 C2' G A 32 -36.273 1.683 14.515 1.00 31.90 C
ATOM 12 O2' G A 32 -36.433 0.531 15.331 1.00 31.68 O
ATOM 13 C1' G A 32 -35.521 1.269 13.249 1.00 33.00 C
ATOM 14 N9 G A 32 -34.656 2.334 12.689 1.00 32.74 N
ATOM 15 C8 G A 32 -34.985 3.255 11.725 1.00 33.76 C
ATOM 16 N7 G A 32 -34.002 4.063 11.429 1.00 33.21 N
ATOM 17 C5 G A 32 -32.956 3.647 12.241 1.00 32.11 C
ATOM 18 C6 G A 32 -31.632 4.145 12.364 1.00 31.32 C
ATOM 19 O6 G A 32 -31.097 5.083 11.760 1.00 31.13 O
ATOM 20 N1 G A 32 -30.903 3.428 13.307 1.00 30.12 N
ATOM 21 C2 G A 32 -31.383 2.371 14.037 1.00 30.04 C
ATOM 22 N2 G A 32 -30.523 1.810 14.898 1.00 29.22 N
ATOM 23 N3 G A 32 -32.614 1.899 13.931 1.00 31.01 N
ATOM 24 C4 G A 32 -33.342 2.578 13.020 1.00 31.82 C
ATOM 25 P U A 33 -39.778 3.179 15.017 1.00 31.42 P
ATOM 26 OP1 U A 33 -40.732 2.726 16.059 1.00 30.88 O
ATOM 27 OP2 U A 33 -40.272 3.440 13.645 1.00 33.00 O
ATOM 28 O5' U A 33 -38.932 4.426 15.530 1.00 32.29 O
TER
ATOM 1 O3' U B 8 -33.535 -0.428 22.853 1.00 27.73 O
ATOM 2 P A B 9 -32.116 -0.606 23.573 1.00 30.27 P
ATOM 3 OP1 A B 9 -32.647 -1.243 24.798 1.00 29.33 O
ATOM 4 OP2 A B 9 -31.291 0.617 23.718 1.00 30.13 O
ATOM 5 O5' A B 9 -31.451 -1.723 22.651 1.00 28.26 O
ATOM 6 C5' A B 9 -31.343 -3.047 23.151 1.00 27.53 C
ATOM 7 C4' A B 9 -31.202 -4.030 22.018 1.00 28.33 C
ATOM 8 O4' A B 9 -32.406 -4.051 21.210 1.00 28.74 O
ATOM 9 C3' A B 9 -30.073 -3.803 21.025 1.00 27.48 C
ATOM 10 O3' A B 9 -28.845 -4.295 21.520 1.00 26.73 O
ATOM 11 C2' A B 9 -30.559 -4.598 19.815 1.00 28.41 C
ATOM 12 O2' A B 9 -30.300 -5.979 20.016 1.00 29.02 O
ATOM 13 C1' A B 9 -32.073 -4.391 19.876 1.00 28.41 C
ATOM 14 N9 A B 9 -32.625 -3.404 18.914 1.00 28.60 N
ATOM 15 C8 A B 9 -33.918 -3.381 18.450 1.00 28.91 C
ATOM 16 N7 A B 9 -34.176 -2.421 17.599 1.00 29.20 N
ATOM 17 C5 A B 9 -32.961 -1.763 17.485 1.00 28.95 C
ATOM 18 C6 A B 9 -32.572 -0.647 16.730 1.00 28.59 C
ATOM 19 N6 A B 9 -33.398 0.017 15.922 1.00 29.21 N
ATOM 20 N1 A B 9 -31.293 -0.233 16.834 1.00 28.68 N
ATOM 21 C2 A B 9 -30.467 -0.901 17.646 1.00 28.71 C
ATOM 22 N3 A B 9 -30.715 -1.963 18.407 1.00 28.83 N
ATOM 23 C4 A B 9 -31.995 -2.353 18.285 1.00 28.91 C
ATOM 24 P A B 10 -27.644 -3.329 21.969 1.00 27.01 P
ATOM 25 OP1 A B 10 -26.798 -4.143 22.874 1.00 25.61 O
ATOM 26 OP2 A B 10 -28.242 -2.072 22.483 1.00 27.64 O
ATOM 27 O5' A B 10 -26.864 -3.046 20.611 1.00 26.58 O
TER
Atoms:
OP1: (-40.486,3.349,10.019)
OP2: (-38.332,4.579,9.375)
C3': (-37.629,2.092,13.950)
C1': (-35.521,1.269,13.249)
C5': (-38.749,1.526,11.710)
O6: (-31.097,5.083,11.760)
O4': (-36.485,0.896,12.285)
C8: (-34.985,3.255,11.725)
C2: (-31.383,2.371,14.037)
C6: (-31.632,4.145,12.364)
C5: (-32.956,3.647,12.241)
C4: (-33.342,2.578,13.020)
P: (-39.013,3.340,9.826)
C4': (-37.819,1.099,12.815)
C2': (-36.273,1.683,14.515)
O2': (-36.433,0.531,15.331)
N1: (-30.903,3.428,13.307)
N2: (-30.523,1.810,14.898)
N3: (-32.614,1.899,13.931)
N7: (-34.002,4.063,11.429)
N9: (-34.656,2.334,12.689)
O5': (-38.293,2.740,11.113)
O3': (-38.676,2.017,14.901)
OP2: (-38.332,4.579,9.375)
C3': (-37.629,2.092,13.950)
C1': (-35.521,1.269,13.249)
C5': (-38.749,1.526,11.710)
O6: (-31.097,5.083,11.760)
O4': (-36.485,0.896,12.285)
C8: (-34.985,3.255,11.725)
C2: (-31.383,2.371,14.037)
C6: (-31.632,4.145,12.364)
C5: (-32.956,3.647,12.241)
C4: (-33.342,2.578,13.020)
P: (-39.013,3.340,9.826)
C4': (-37.819,1.099,12.815)
C2': (-36.273,1.683,14.515)
O2': (-36.433,0.531,15.331)
N1: (-30.903,3.428,13.307)
N2: (-30.523,1.810,14.898)
N3: (-32.614,1.899,13.931)
N7: (-34.002,4.063,11.429)
N9: (-34.656,2.334,12.689)
O5': (-38.293,2.740,11.113)
O3': (-38.676,2.017,14.901)
OP1: (-32.647,-1.243,24.798)
OP2: (-31.291,0.617,23.718)
C3': (-30.073,-3.803,21.025)
C1': (-32.073,-4.391,19.876)
C5': (-31.343,-3.047,23.151)
O4': (-32.406,-4.051,21.210)
C8: (-33.918,-3.381,18.450)
O2': (-30.300,-5.979,20.016)
C6: (-32.572,-0.647,16.730)
C5: (-32.961,-1.763,17.485)
C4: (-31.995,-2.353,18.285)
P: (-32.116,-0.606,23.573)
C4': (-31.202,-4.030,22.018)
C2': (-30.559,-4.598,19.815)
C2: (-30.467,-0.901,17.646)
N1: (-31.293,-0.233,16.834)
N3: (-30.715,-1.963,18.407)
N6: (-33.398,0.017,15.922)
N7: (-34.176,-2.421,17.599)
N9: (-32.625,-3.404,18.914)
O5': (-31.451,-1.723,22.651)
O3': (-28.845,-4.295,21.520)
OP2: (-31.291,0.617,23.718)
C3': (-30.073,-3.803,21.025)
C1': (-32.073,-4.391,19.876)
C5': (-31.343,-3.047,23.151)
O4': (-32.406,-4.051,21.210)
C8: (-33.918,-3.381,18.450)
O2': (-30.300,-5.979,20.016)
C6: (-32.572,-0.647,16.730)
C5: (-32.961,-1.763,17.485)
C4: (-31.995,-2.353,18.285)
P: (-32.116,-0.606,23.573)
C4': (-31.202,-4.030,22.018)
C2': (-30.559,-4.598,19.815)
C2: (-30.467,-0.901,17.646)
N1: (-31.293,-0.233,16.834)
N3: (-30.715,-1.963,18.407)
N6: (-33.398,0.017,15.922)
N7: (-34.176,-2.421,17.599)
N9: (-32.625,-3.404,18.914)
O5': (-31.451,-1.723,22.651)
O3': (-28.845,-4.295,21.520)
Image (generated by PyMOL):