Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DH3:F8:F11
Extra
PDB:
ATOM 1 O3' C A 7 5.190 -35.775 35.476 1.00 46.29 O
ATOM 2 P G A 8 5.407 -35.204 34.001 1.00 44.76 P
ATOM 3 OP1 G A 8 4.882 -36.210 33.035 1.00 43.03 O
ATOM 4 OP2 G A 8 6.815 -34.775 34.025 1.00 46.34 O
ATOM 5 O5' G A 8 4.569 -33.857 34.030 1.00 45.20 O
ATOM 6 C5' G A 8 4.660 -33.009 32.973 1.00 46.77 C
ATOM 7 C4' G A 8 4.714 -31.570 33.428 1.00 48.57 C
ATOM 8 O4' G A 8 5.193 -31.424 34.772 1.00 47.83 O
ATOM 9 C3' G A 8 5.754 -30.850 32.610 1.00 50.70 C
ATOM 10 O3' G A 8 5.229 -30.530 31.325 1.00 54.78 O
ATOM 11 C2' G A 8 6.189 -29.666 33.480 1.00 49.41 C
ATOM 12 O2' G A 8 5.441 -28.485 33.356 1.00 48.20 O
ATOM 13 C1' G A 8 6.011 -30.257 34.862 1.00 48.28 C
ATOM 14 N9 G A 8 7.292 -30.610 35.482 1.00 47.43 N
ATOM 15 C8 G A 8 7.819 -31.872 35.643 1.00 46.87 C
ATOM 16 N7 G A 8 8.976 -31.877 36.251 1.00 46.46 N
ATOM 17 C5 G A 8 9.226 -30.546 36.513 1.00 46.44 C
ATOM 18 C6 G A 8 10.319 -29.962 37.157 1.00 46.83 C
ATOM 19 O6 G A 8 11.287 -30.545 37.623 1.00 49.88 O
ATOM 20 N1 G A 8 10.226 -28.588 37.229 1.00 45.92 N
ATOM 21 C2 G A 8 9.167 -27.875 36.729 1.00 46.31 C
ATOM 22 N2 G A 8 9.218 -26.543 36.881 1.00 47.06 N
ATOM 23 N3 G A 8 8.112 -28.411 36.126 1.00 46.30 N
ATOM 24 C4 G A 8 8.210 -29.752 36.050 1.00 46.68 C
ATOM 25 P U A 9 5.824 -31.195 29.979 1.00 56.70 P
ATOM 26 OP1 U A 9 4.637 -31.777 29.287 1.00 56.70 O
ATOM 27 OP2 U A 9 6.935 -32.111 30.289 1.00 55.28 O
ATOM 28 O5' U A 9 6.407 -29.884 29.241 1.00 58.02 O
TER
ATOM 1 O3' G B 10 10.222 -21.451 31.479 1.00 64.10 O
ATOM 2 P A B 11 9.891 -20.124 32.346 1.00 63.77 P
ATOM 3 OP1 A B 11 9.895 -18.966 31.432 1.00 64.26 O
ATOM 4 OP2 A B 11 10.783 -20.072 33.529 1.00 62.80 O
ATOM 5 O5' A B 11 8.354 -20.252 32.786 1.00 60.59 O
ATOM 6 C5' A B 11 7.966 -19.475 33.914 1.00 57.48 C
ATOM 7 C4' A B 11 6.459 -19.423 34.067 1.00 56.12 C
ATOM 8 O4' A B 11 5.796 -20.481 33.329 1.00 55.04 O
ATOM 9 C3' A B 11 5.981 -19.598 35.499 1.00 55.36 C
ATOM 10 O3' A B 11 6.152 -18.376 36.216 1.00 55.17 O
ATOM 11 C2' A B 11 4.521 -20.018 35.318 1.00 55.14 C
ATOM 12 O2' A B 11 3.618 -18.932 35.289 1.00 55.54 O
ATOM 13 C1' A B 11 4.546 -20.742 33.967 1.00 54.99 C
ATOM 14 N9 A B 11 4.448 -22.186 34.101 1.00 54.21 N
ATOM 15 C8 A B 11 3.400 -22.997 33.777 1.00 53.41 C
ATOM 16 N7 A B 11 3.656 -24.263 34.023 1.00 53.89 N
ATOM 17 C5 A B 11 4.958 -24.290 34.535 1.00 54.25 C
ATOM 18 C6 A B 11 5.841 -25.320 34.997 1.00 53.62 C
ATOM 19 N6 A B 11 5.544 -26.624 35.030 1.00 53.06 N
ATOM 20 N1 A B 11 7.065 -24.969 35.454 1.00 53.26 N
ATOM 21 C2 A B 11 7.406 -23.676 35.451 1.00 53.58 C
ATOM 22 N3 A B 11 6.687 -22.630 35.038 1.00 54.35 N
ATOM 23 C4 A B 11 5.458 -23.000 34.589 1.00 54.59 C
ATOM 24 P G B 12 6.425 -18.415 37.798 1.00 55.51 P
ATOM 25 OP1 G B 12 6.484 -17.029 38.333 1.00 55.03 O
ATOM 26 OP2 G B 12 7.557 -19.332 38.082 1.00 55.96 O
ATOM 27 O5' G B 12 5.053 -19.135 38.233 1.00 54.66 O
TER
ATOM 2 P G A 8 5.407 -35.204 34.001 1.00 44.76 P
ATOM 3 OP1 G A 8 4.882 -36.210 33.035 1.00 43.03 O
ATOM 4 OP2 G A 8 6.815 -34.775 34.025 1.00 46.34 O
ATOM 5 O5' G A 8 4.569 -33.857 34.030 1.00 45.20 O
ATOM 6 C5' G A 8 4.660 -33.009 32.973 1.00 46.77 C
ATOM 7 C4' G A 8 4.714 -31.570 33.428 1.00 48.57 C
ATOM 8 O4' G A 8 5.193 -31.424 34.772 1.00 47.83 O
ATOM 9 C3' G A 8 5.754 -30.850 32.610 1.00 50.70 C
ATOM 10 O3' G A 8 5.229 -30.530 31.325 1.00 54.78 O
ATOM 11 C2' G A 8 6.189 -29.666 33.480 1.00 49.41 C
ATOM 12 O2' G A 8 5.441 -28.485 33.356 1.00 48.20 O
ATOM 13 C1' G A 8 6.011 -30.257 34.862 1.00 48.28 C
ATOM 14 N9 G A 8 7.292 -30.610 35.482 1.00 47.43 N
ATOM 15 C8 G A 8 7.819 -31.872 35.643 1.00 46.87 C
ATOM 16 N7 G A 8 8.976 -31.877 36.251 1.00 46.46 N
ATOM 17 C5 G A 8 9.226 -30.546 36.513 1.00 46.44 C
ATOM 18 C6 G A 8 10.319 -29.962 37.157 1.00 46.83 C
ATOM 19 O6 G A 8 11.287 -30.545 37.623 1.00 49.88 O
ATOM 20 N1 G A 8 10.226 -28.588 37.229 1.00 45.92 N
ATOM 21 C2 G A 8 9.167 -27.875 36.729 1.00 46.31 C
ATOM 22 N2 G A 8 9.218 -26.543 36.881 1.00 47.06 N
ATOM 23 N3 G A 8 8.112 -28.411 36.126 1.00 46.30 N
ATOM 24 C4 G A 8 8.210 -29.752 36.050 1.00 46.68 C
ATOM 25 P U A 9 5.824 -31.195 29.979 1.00 56.70 P
ATOM 26 OP1 U A 9 4.637 -31.777 29.287 1.00 56.70 O
ATOM 27 OP2 U A 9 6.935 -32.111 30.289 1.00 55.28 O
ATOM 28 O5' U A 9 6.407 -29.884 29.241 1.00 58.02 O
TER
ATOM 1 O3' G B 10 10.222 -21.451 31.479 1.00 64.10 O
ATOM 2 P A B 11 9.891 -20.124 32.346 1.00 63.77 P
ATOM 3 OP1 A B 11 9.895 -18.966 31.432 1.00 64.26 O
ATOM 4 OP2 A B 11 10.783 -20.072 33.529 1.00 62.80 O
ATOM 5 O5' A B 11 8.354 -20.252 32.786 1.00 60.59 O
ATOM 6 C5' A B 11 7.966 -19.475 33.914 1.00 57.48 C
ATOM 7 C4' A B 11 6.459 -19.423 34.067 1.00 56.12 C
ATOM 8 O4' A B 11 5.796 -20.481 33.329 1.00 55.04 O
ATOM 9 C3' A B 11 5.981 -19.598 35.499 1.00 55.36 C
ATOM 10 O3' A B 11 6.152 -18.376 36.216 1.00 55.17 O
ATOM 11 C2' A B 11 4.521 -20.018 35.318 1.00 55.14 C
ATOM 12 O2' A B 11 3.618 -18.932 35.289 1.00 55.54 O
ATOM 13 C1' A B 11 4.546 -20.742 33.967 1.00 54.99 C
ATOM 14 N9 A B 11 4.448 -22.186 34.101 1.00 54.21 N
ATOM 15 C8 A B 11 3.400 -22.997 33.777 1.00 53.41 C
ATOM 16 N7 A B 11 3.656 -24.263 34.023 1.00 53.89 N
ATOM 17 C5 A B 11 4.958 -24.290 34.535 1.00 54.25 C
ATOM 18 C6 A B 11 5.841 -25.320 34.997 1.00 53.62 C
ATOM 19 N6 A B 11 5.544 -26.624 35.030 1.00 53.06 N
ATOM 20 N1 A B 11 7.065 -24.969 35.454 1.00 53.26 N
ATOM 21 C2 A B 11 7.406 -23.676 35.451 1.00 53.58 C
ATOM 22 N3 A B 11 6.687 -22.630 35.038 1.00 54.35 N
ATOM 23 C4 A B 11 5.458 -23.000 34.589 1.00 54.59 C
ATOM 24 P G B 12 6.425 -18.415 37.798 1.00 55.51 P
ATOM 25 OP1 G B 12 6.484 -17.029 38.333 1.00 55.03 O
ATOM 26 OP2 G B 12 7.557 -19.332 38.082 1.00 55.96 O
ATOM 27 O5' G B 12 5.053 -19.135 38.233 1.00 54.66 O
TER
Atoms:
OP1: (4.882,-36.210,33.035)
OP2: (6.815,-34.775,34.025)
C3': (5.754,-30.850,32.610)
C1': (6.011,-30.257,34.862)
C5': (4.660,-33.009,32.973)
O6: (11.287,-30.545,37.623)
O4': (5.193,-31.424,34.772)
C8: (7.819,-31.872,35.643)
C2: (9.167,-27.875,36.729)
C6: (10.319,-29.962,37.157)
C5: (9.226,-30.546,36.513)
C4: (8.210,-29.752,36.050)
P: (5.407,-35.204,34.001)
C4': (4.714,-31.570,33.428)
C2': (6.189,-29.666,33.480)
O2': (5.441,-28.485,33.356)
N1: (10.226,-28.588,37.229)
N2: (9.218,-26.543,36.881)
N3: (8.112,-28.411,36.126)
N7: (8.976,-31.877,36.251)
N9: (7.292,-30.610,35.482)
O5': (4.569,-33.857,34.030)
O3': (5.229,-30.530,31.325)
OP2: (6.815,-34.775,34.025)
C3': (5.754,-30.850,32.610)
C1': (6.011,-30.257,34.862)
C5': (4.660,-33.009,32.973)
O6: (11.287,-30.545,37.623)
O4': (5.193,-31.424,34.772)
C8: (7.819,-31.872,35.643)
C2: (9.167,-27.875,36.729)
C6: (10.319,-29.962,37.157)
C5: (9.226,-30.546,36.513)
C4: (8.210,-29.752,36.050)
P: (5.407,-35.204,34.001)
C4': (4.714,-31.570,33.428)
C2': (6.189,-29.666,33.480)
O2': (5.441,-28.485,33.356)
N1: (10.226,-28.588,37.229)
N2: (9.218,-26.543,36.881)
N3: (8.112,-28.411,36.126)
N7: (8.976,-31.877,36.251)
N9: (7.292,-30.610,35.482)
O5': (4.569,-33.857,34.030)
O3': (5.229,-30.530,31.325)
OP1: (9.895,-18.966,31.432)
OP2: (10.783,-20.072,33.529)
C3': (5.981,-19.598,35.499)
C1': (4.546,-20.742,33.967)
C5': (7.966,-19.475,33.914)
O4': (5.796,-20.481,33.329)
C8: (3.400,-22.997,33.777)
O2': (3.618,-18.932,35.289)
C6: (5.841,-25.320,34.997)
C5: (4.958,-24.290,34.535)
C4: (5.458,-23.000,34.589)
P: (9.891,-20.124,32.346)
C4': (6.459,-19.423,34.067)
C2': (4.521,-20.018,35.318)
C2: (7.406,-23.676,35.451)
N1: (7.065,-24.969,35.454)
N3: (6.687,-22.630,35.038)
N6: (5.544,-26.624,35.030)
N7: (3.656,-24.263,34.023)
N9: (4.448,-22.186,34.101)
O5': (8.354,-20.252,32.786)
O3': (6.152,-18.376,36.216)
OP2: (10.783,-20.072,33.529)
C3': (5.981,-19.598,35.499)
C1': (4.546,-20.742,33.967)
C5': (7.966,-19.475,33.914)
O4': (5.796,-20.481,33.329)
C8: (3.400,-22.997,33.777)
O2': (3.618,-18.932,35.289)
C6: (5.841,-25.320,34.997)
C5: (4.958,-24.290,34.535)
C4: (5.458,-23.000,34.589)
P: (9.891,-20.124,32.346)
C4': (6.459,-19.423,34.067)
C2': (4.521,-20.018,35.318)
C2: (7.406,-23.676,35.451)
N1: (7.065,-24.969,35.454)
N3: (6.687,-22.630,35.038)
N6: (5.544,-26.624,35.030)
N7: (3.656,-24.263,34.023)
N9: (4.448,-22.186,34.101)
O5': (8.354,-20.252,32.786)
O3': (6.152,-18.376,36.216)
Image (generated by PyMOL):