Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1338:1346
Extra
PDB:
ATOM 1 O3' C A 337 74.474 -4.157 88.480 1.00 35.08 O
ATOM 2 P G A 338 75.649 -3.473 87.619 1.00 36.90 P
ATOM 3 OP1 G A 338 75.095 -3.307 86.232 1.00 36.59 O
ATOM 4 OP2 G A 338 76.900 -4.286 87.792 1.00 37.12 O
ATOM 5 O5' G A 338 75.824 -2.050 88.289 1.00 37.09 O
ATOM 6 C5' G A 338 74.741 -1.166 88.376 1.00 36.96 C
ATOM 7 C4' G A 338 74.965 -0.136 89.431 1.00 37.23 C
ATOM 8 O4' G A 338 75.357 -0.796 90.672 1.00 37.49 O
ATOM 9 C3' G A 338 76.057 0.872 89.122 1.00 37.41 C
ATOM 10 O3' G A 338 75.712 2.104 89.689 1.00 37.53 O
ATOM 11 C2' G A 338 77.255 0.328 89.876 1.00 37.72 C
ATOM 12 O2' G A 338 78.209 1.295 90.214 1.00 38.00 O
ATOM 13 C1' G A 338 76.614 -0.293 91.109 1.00 37.81 C
ATOM 14 N9 G A 338 77.394 -1.398 91.605 1.00 37.99 N
ATOM 15 C8 G A 338 77.725 -2.486 90.842 1.00 37.86 C
ATOM 16 N7 G A 338 78.502 -3.327 91.445 1.00 38.08 N
ATOM 17 C5 G A 338 78.744 -2.702 92.667 1.00 38.39 C
ATOM 18 C6 G A 338 79.527 -3.093 93.752 1.00 38.74 C
ATOM 19 O6 G A 338 80.188 -4.117 93.808 1.00 38.85 O
ATOM 20 N1 G A 338 79.495 -2.185 94.796 1.00 38.99 N
ATOM 21 C2 G A 338 78.813 -1.018 94.811 1.00 38.91 C
ATOM 22 N2 G A 338 78.865 -0.241 95.882 1.00 39.20 N
ATOM 23 N3 G A 338 78.073 -0.623 93.820 1.00 38.59 N
ATOM 24 C4 G A 338 78.077 -1.503 92.780 1.00 38.34 C
ATOM 25 P A A 339 75.409 3.335 88.758 1.00 36.55 P
ATOM 26 OP1 A A 339 74.949 2.800 87.454 1.00 36.22 O
ATOM 27 OP2 A A 339 76.605 4.221 88.780 1.00 36.82 O
ATOM 28 O5' A A 339 74.238 4.045 89.522 1.00 36.55 O
TER
ATOM 1 O3' A B 345 68.037 5.175 99.624 1.00 37.09 O
ATOM 2 P A B 346 69.497 4.555 99.298 1.00 43.66 P
ATOM 3 OP1 A B 346 70.022 5.236 98.089 1.00 43.51 O
ATOM 4 OP2 A B 346 69.387 3.094 99.284 1.00 43.52 O
ATOM 5 O5' A B 346 70.316 5.001 100.560 1.00 44.12 O
ATOM 6 C5' A B 346 70.944 4.047 101.378 1.00 44.34 C
ATOM 7 C4' A B 346 72.389 4.381 101.562 1.00 44.64 C
ATOM 8 O4' A B 346 73.173 3.666 100.582 1.00 44.46 O
ATOM 9 C3' A B 346 72.750 5.842 101.390 1.00 44.78 C
ATOM 10 O3' A B 346 73.854 6.089 102.222 1.00 45.19 O
ATOM 11 C2' A B 346 73.216 5.903 99.934 1.00 44.49 C
ATOM 12 O2' A B 346 74.085 6.967 99.649 1.00 44.67 O
ATOM 13 C1' A B 346 73.930 4.576 99.806 1.00 44.46 C
ATOM 14 N9 A B 346 74.017 4.025 98.453 1.00 44.10 N
ATOM 15 C8 A B 346 73.105 3.940 97.413 1.00 43.71 C
ATOM 16 N7 A B 346 73.553 3.282 96.349 1.00 43.49 N
ATOM 17 C5 A B 346 74.812 2.828 96.750 1.00 43.75 C
ATOM 18 C6 A B 346 75.817 2.066 96.113 1.00 43.73 C
ATOM 19 N6 A B 346 75.714 1.551 94.890 1.00 43.41 N
ATOM 20 N1 A B 346 76.964 1.837 96.803 1.00 44.06 N
ATOM 21 C2 A B 346 77.079 2.335 98.043 1.00 44.40 C
ATOM 22 N3 A B 346 76.229 3.073 98.748 1.00 44.47 N
ATOM 23 C4 A B 346 75.100 3.278 98.044 1.00 44.13 C
ATOM 24 P C B 347 73.680 6.755 103.664 1.00 45.07 P
ATOM 25 OP1 C B 347 75.070 6.970 104.217 1.00 45.47 O
ATOM 26 OP2 C B 347 72.722 5.914 104.440 1.00 45.04 O
ATOM 27 O5' C B 347 73.031 8.137 103.307 1.00 45.01 O
TER
ATOM 2 P G A 338 75.649 -3.473 87.619 1.00 36.90 P
ATOM 3 OP1 G A 338 75.095 -3.307 86.232 1.00 36.59 O
ATOM 4 OP2 G A 338 76.900 -4.286 87.792 1.00 37.12 O
ATOM 5 O5' G A 338 75.824 -2.050 88.289 1.00 37.09 O
ATOM 6 C5' G A 338 74.741 -1.166 88.376 1.00 36.96 C
ATOM 7 C4' G A 338 74.965 -0.136 89.431 1.00 37.23 C
ATOM 8 O4' G A 338 75.357 -0.796 90.672 1.00 37.49 O
ATOM 9 C3' G A 338 76.057 0.872 89.122 1.00 37.41 C
ATOM 10 O3' G A 338 75.712 2.104 89.689 1.00 37.53 O
ATOM 11 C2' G A 338 77.255 0.328 89.876 1.00 37.72 C
ATOM 12 O2' G A 338 78.209 1.295 90.214 1.00 38.00 O
ATOM 13 C1' G A 338 76.614 -0.293 91.109 1.00 37.81 C
ATOM 14 N9 G A 338 77.394 -1.398 91.605 1.00 37.99 N
ATOM 15 C8 G A 338 77.725 -2.486 90.842 1.00 37.86 C
ATOM 16 N7 G A 338 78.502 -3.327 91.445 1.00 38.08 N
ATOM 17 C5 G A 338 78.744 -2.702 92.667 1.00 38.39 C
ATOM 18 C6 G A 338 79.527 -3.093 93.752 1.00 38.74 C
ATOM 19 O6 G A 338 80.188 -4.117 93.808 1.00 38.85 O
ATOM 20 N1 G A 338 79.495 -2.185 94.796 1.00 38.99 N
ATOM 21 C2 G A 338 78.813 -1.018 94.811 1.00 38.91 C
ATOM 22 N2 G A 338 78.865 -0.241 95.882 1.00 39.20 N
ATOM 23 N3 G A 338 78.073 -0.623 93.820 1.00 38.59 N
ATOM 24 C4 G A 338 78.077 -1.503 92.780 1.00 38.34 C
ATOM 25 P A A 339 75.409 3.335 88.758 1.00 36.55 P
ATOM 26 OP1 A A 339 74.949 2.800 87.454 1.00 36.22 O
ATOM 27 OP2 A A 339 76.605 4.221 88.780 1.00 36.82 O
ATOM 28 O5' A A 339 74.238 4.045 89.522 1.00 36.55 O
TER
ATOM 1 O3' A B 345 68.037 5.175 99.624 1.00 37.09 O
ATOM 2 P A B 346 69.497 4.555 99.298 1.00 43.66 P
ATOM 3 OP1 A B 346 70.022 5.236 98.089 1.00 43.51 O
ATOM 4 OP2 A B 346 69.387 3.094 99.284 1.00 43.52 O
ATOM 5 O5' A B 346 70.316 5.001 100.560 1.00 44.12 O
ATOM 6 C5' A B 346 70.944 4.047 101.378 1.00 44.34 C
ATOM 7 C4' A B 346 72.389 4.381 101.562 1.00 44.64 C
ATOM 8 O4' A B 346 73.173 3.666 100.582 1.00 44.46 O
ATOM 9 C3' A B 346 72.750 5.842 101.390 1.00 44.78 C
ATOM 10 O3' A B 346 73.854 6.089 102.222 1.00 45.19 O
ATOM 11 C2' A B 346 73.216 5.903 99.934 1.00 44.49 C
ATOM 12 O2' A B 346 74.085 6.967 99.649 1.00 44.67 O
ATOM 13 C1' A B 346 73.930 4.576 99.806 1.00 44.46 C
ATOM 14 N9 A B 346 74.017 4.025 98.453 1.00 44.10 N
ATOM 15 C8 A B 346 73.105 3.940 97.413 1.00 43.71 C
ATOM 16 N7 A B 346 73.553 3.282 96.349 1.00 43.49 N
ATOM 17 C5 A B 346 74.812 2.828 96.750 1.00 43.75 C
ATOM 18 C6 A B 346 75.817 2.066 96.113 1.00 43.73 C
ATOM 19 N6 A B 346 75.714 1.551 94.890 1.00 43.41 N
ATOM 20 N1 A B 346 76.964 1.837 96.803 1.00 44.06 N
ATOM 21 C2 A B 346 77.079 2.335 98.043 1.00 44.40 C
ATOM 22 N3 A B 346 76.229 3.073 98.748 1.00 44.47 N
ATOM 23 C4 A B 346 75.100 3.278 98.044 1.00 44.13 C
ATOM 24 P C B 347 73.680 6.755 103.664 1.00 45.07 P
ATOM 25 OP1 C B 347 75.070 6.970 104.217 1.00 45.47 O
ATOM 26 OP2 C B 347 72.722 5.914 104.440 1.00 45.04 O
ATOM 27 O5' C B 347 73.031 8.137 103.307 1.00 45.01 O
TER
Atoms:
OP1: (75.095,-3.307,86.232)
OP2: (76.900,-4.286,87.792)
C3': (76.057,0.872,89.122)
C1': (76.614,-0.293,91.109)
C5': (74.741,-1.166,88.376)
O6: (80.188,-4.117,93.808)
O4': (75.357,-0.796,90.672)
C8: (77.725,-2.486,90.842)
C2: (78.813,-1.018,94.811)
C6: (79.527,-3.093,93.752)
C5: (78.744,-2.702,92.667)
C4: (78.077,-1.503,92.780)
P: (75.649,-3.473,87.619)
C4': (74.965,-0.136,89.431)
C2': (77.255,0.328,89.876)
O2': (78.209,1.295,90.214)
N1: (79.495,-2.185,94.796)
N2: (78.865,-0.241,95.882)
N3: (78.073,-0.623,93.820)
N7: (78.502,-3.327,91.445)
N9: (77.394,-1.398,91.605)
O5': (75.824,-2.050,88.289)
O3': (75.712,2.104,89.689)
OP2: (76.900,-4.286,87.792)
C3': (76.057,0.872,89.122)
C1': (76.614,-0.293,91.109)
C5': (74.741,-1.166,88.376)
O6: (80.188,-4.117,93.808)
O4': (75.357,-0.796,90.672)
C8: (77.725,-2.486,90.842)
C2: (78.813,-1.018,94.811)
C6: (79.527,-3.093,93.752)
C5: (78.744,-2.702,92.667)
C4: (78.077,-1.503,92.780)
P: (75.649,-3.473,87.619)
C4': (74.965,-0.136,89.431)
C2': (77.255,0.328,89.876)
O2': (78.209,1.295,90.214)
N1: (79.495,-2.185,94.796)
N2: (78.865,-0.241,95.882)
N3: (78.073,-0.623,93.820)
N7: (78.502,-3.327,91.445)
N9: (77.394,-1.398,91.605)
O5': (75.824,-2.050,88.289)
O3': (75.712,2.104,89.689)
OP1: (70.022,5.236,98.089)
OP2: (69.387,3.094,99.284)
C3': (72.750,5.842,101.390)
C1': (73.930,4.576,99.806)
C5': (70.944,4.047,101.378)
O4': (73.173,3.666,100.582)
C8: (73.105,3.940,97.413)
O2': (74.085,6.967,99.649)
C6: (75.817,2.066,96.113)
C5: (74.812,2.828,96.750)
C4: (75.100,3.278,98.044)
P: (69.497,4.555,99.298)
C4': (72.389,4.381,101.562)
C2': (73.216,5.903,99.934)
C2: (77.079,2.335,98.043)
N1: (76.964,1.837,96.803)
N3: (76.229,3.073,98.748)
N6: (75.714,1.551,94.890)
N7: (73.553,3.282,96.349)
N9: (74.017,4.025,98.453)
O5': (70.316,5.001,100.560)
O3': (73.854,6.089,102.222)
OP2: (69.387,3.094,99.284)
C3': (72.750,5.842,101.390)
C1': (73.930,4.576,99.806)
C5': (70.944,4.047,101.378)
O4': (73.173,3.666,100.582)
C8: (73.105,3.940,97.413)
O2': (74.085,6.967,99.649)
C6: (75.817,2.066,96.113)
C5: (74.812,2.828,96.750)
C4: (75.100,3.278,98.044)
P: (69.497,4.555,99.298)
C4': (72.389,4.381,101.562)
C2': (73.216,5.903,99.934)
C2: (77.079,2.335,98.043)
N1: (76.964,1.837,96.803)
N3: (76.229,3.073,98.748)
N6: (75.714,1.551,94.890)
N7: (73.553,3.282,96.349)
N9: (74.017,4.025,98.453)
O5': (70.316,5.001,100.560)
O3': (73.854,6.089,102.222)
Image (generated by PyMOL):