Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A1945:A581
Extra
PDB:
ATOM 1 O3' U A1944 -47.866 115.837 192.137 1.00 43.49 O
ATOM 2 P G A1945 -48.182 116.690 190.819 1.00 14.62 P
ATOM 3 OP1 G A1945 -49.508 117.330 191.081 1.00 24.44 O
ATOM 4 OP2 G A1945 -47.993 115.839 189.606 1.00 24.44 O
ATOM 5 O5' G A1945 -47.069 117.830 190.836 1.00 14.10 O
ATOM 6 C5' G A1945 -47.074 118.826 191.878 1.00 14.10 C
ATOM 7 C4' G A1945 -45.732 119.495 191.990 1.00 14.10 C
ATOM 8 O4' G A1945 -44.710 118.505 192.256 1.00 14.10 O
ATOM 9 C3' G A1945 -45.230 120.218 190.758 1.00 14.10 C
ATOM 10 O3' G A1945 -45.766 121.524 190.680 1.00 14.10 O
ATOM 11 C2' G A1945 -43.732 120.263 190.996 1.00 14.10 C
ATOM 12 O2' G A1945 -43.405 121.323 191.869 1.00 14.10 O
ATOM 13 C1' G A1945 -43.481 118.922 191.692 1.00 14.10 C
ATOM 14 N9 G A1945 -43.020 117.898 190.759 1.00 6.34 N
ATOM 15 C8 G A1945 -43.796 117.044 190.015 1.00 6.34 C
ATOM 16 N7 G A1945 -43.098 116.286 189.215 1.00 6.34 N
ATOM 17 C5 G A1945 -41.780 116.652 189.455 1.00 6.34 C
ATOM 18 C6 G A1945 -40.573 116.177 188.875 1.00 6.34 C
ATOM 19 O6 G A1945 -40.427 115.319 188.001 1.00 6.34 O
ATOM 20 N1 G A1945 -39.461 116.808 189.415 1.00 6.34 N
ATOM 21 C2 G A1945 -39.500 117.769 190.385 1.00 6.34 C
ATOM 22 N2 G A1945 -38.309 118.247 190.782 1.00 6.34 N
ATOM 23 N3 G A1945 -40.620 118.229 190.930 1.00 6.34 N
ATOM 24 C4 G A1945 -41.713 117.629 190.421 1.00 6.34 C
ATOM 25 P A A1946 -46.349 122.046 189.282 1.00 34.52 P
ATOM 26 OP1 A A1946 -46.871 123.415 189.507 1.00 64.18 O
ATOM 27 OP2 A A1946 -47.252 120.996 188.733 1.00 64.18 O
ATOM 28 O5' A A1946 -45.060 122.138 188.345 1.00 15.95 O
TER
ATOM 1 O3' A B 580 -39.216 127.776 193.472 1.00 20.65 O
ATOM 2 P A B 581 -38.778 128.151 194.973 1.00 20.89 P
ATOM 3 OP1 A B 581 -39.928 127.865 195.864 1.00 32.20 O
ATOM 4 OP2 A B 581 -38.134 129.486 195.019 1.00 32.20 O
ATOM 5 O5' A B 581 -37.657 127.063 195.256 1.00 8.04 O
ATOM 6 C5' A B 581 -36.517 127.382 196.056 1.00 8.04 C
ATOM 7 C4' A B 581 -35.524 126.250 196.004 1.00 8.04 C
ATOM 8 O4' A B 581 -36.161 125.038 196.474 1.00 8.04 O
ATOM 9 C3' A B 581 -35.033 125.911 194.615 1.00 8.04 C
ATOM 10 O3' A B 581 -33.920 126.725 194.297 1.00 8.04 O
ATOM 11 C2' A B 581 -34.680 124.427 194.724 1.00 8.04 C
ATOM 12 O2' A B 581 -33.384 124.182 195.232 1.00 8.04 O
ATOM 13 C1' A B 581 -35.716 123.927 195.730 1.00 8.04 C
ATOM 14 N9 A B 581 -36.897 123.317 195.139 1.00 0.79 N
ATOM 15 C8 A B 581 -38.192 123.720 195.328 1.00 0.79 C
ATOM 16 N7 A B 581 -39.074 122.985 194.698 1.00 0.79 N
ATOM 17 C5 A B 581 -38.304 122.044 194.045 1.00 0.79 C
ATOM 18 C6 A B 581 -38.648 120.990 193.215 1.00 0.79 C
ATOM 19 N6 A B 581 -39.907 120.708 192.887 1.00 0.79 N
ATOM 20 N1 A B 581 -37.652 120.225 192.724 1.00 0.79 N
ATOM 21 C2 A B 581 -36.392 120.528 193.061 1.00 0.79 C
ATOM 22 N3 A B 581 -35.942 121.509 193.841 1.00 0.79 N
ATOM 23 C4 A B 581 -36.962 122.237 194.306 1.00 0.79 C
ATOM 24 P G B 582 -34.142 128.034 193.419 1.00 5.20 P
ATOM 25 OP1 G B 582 -32.836 128.270 192.746 1.00 21.40 O
ATOM 26 OP2 G B 582 -34.749 129.097 194.250 1.00 21.40 O
ATOM 27 O5' G B 582 -35.234 127.587 192.351 1.00 15.26 O
TER
ATOM 2 P G A1945 -48.182 116.690 190.819 1.00 14.62 P
ATOM 3 OP1 G A1945 -49.508 117.330 191.081 1.00 24.44 O
ATOM 4 OP2 G A1945 -47.993 115.839 189.606 1.00 24.44 O
ATOM 5 O5' G A1945 -47.069 117.830 190.836 1.00 14.10 O
ATOM 6 C5' G A1945 -47.074 118.826 191.878 1.00 14.10 C
ATOM 7 C4' G A1945 -45.732 119.495 191.990 1.00 14.10 C
ATOM 8 O4' G A1945 -44.710 118.505 192.256 1.00 14.10 O
ATOM 9 C3' G A1945 -45.230 120.218 190.758 1.00 14.10 C
ATOM 10 O3' G A1945 -45.766 121.524 190.680 1.00 14.10 O
ATOM 11 C2' G A1945 -43.732 120.263 190.996 1.00 14.10 C
ATOM 12 O2' G A1945 -43.405 121.323 191.869 1.00 14.10 O
ATOM 13 C1' G A1945 -43.481 118.922 191.692 1.00 14.10 C
ATOM 14 N9 G A1945 -43.020 117.898 190.759 1.00 6.34 N
ATOM 15 C8 G A1945 -43.796 117.044 190.015 1.00 6.34 C
ATOM 16 N7 G A1945 -43.098 116.286 189.215 1.00 6.34 N
ATOM 17 C5 G A1945 -41.780 116.652 189.455 1.00 6.34 C
ATOM 18 C6 G A1945 -40.573 116.177 188.875 1.00 6.34 C
ATOM 19 O6 G A1945 -40.427 115.319 188.001 1.00 6.34 O
ATOM 20 N1 G A1945 -39.461 116.808 189.415 1.00 6.34 N
ATOM 21 C2 G A1945 -39.500 117.769 190.385 1.00 6.34 C
ATOM 22 N2 G A1945 -38.309 118.247 190.782 1.00 6.34 N
ATOM 23 N3 G A1945 -40.620 118.229 190.930 1.00 6.34 N
ATOM 24 C4 G A1945 -41.713 117.629 190.421 1.00 6.34 C
ATOM 25 P A A1946 -46.349 122.046 189.282 1.00 34.52 P
ATOM 26 OP1 A A1946 -46.871 123.415 189.507 1.00 64.18 O
ATOM 27 OP2 A A1946 -47.252 120.996 188.733 1.00 64.18 O
ATOM 28 O5' A A1946 -45.060 122.138 188.345 1.00 15.95 O
TER
ATOM 1 O3' A B 580 -39.216 127.776 193.472 1.00 20.65 O
ATOM 2 P A B 581 -38.778 128.151 194.973 1.00 20.89 P
ATOM 3 OP1 A B 581 -39.928 127.865 195.864 1.00 32.20 O
ATOM 4 OP2 A B 581 -38.134 129.486 195.019 1.00 32.20 O
ATOM 5 O5' A B 581 -37.657 127.063 195.256 1.00 8.04 O
ATOM 6 C5' A B 581 -36.517 127.382 196.056 1.00 8.04 C
ATOM 7 C4' A B 581 -35.524 126.250 196.004 1.00 8.04 C
ATOM 8 O4' A B 581 -36.161 125.038 196.474 1.00 8.04 O
ATOM 9 C3' A B 581 -35.033 125.911 194.615 1.00 8.04 C
ATOM 10 O3' A B 581 -33.920 126.725 194.297 1.00 8.04 O
ATOM 11 C2' A B 581 -34.680 124.427 194.724 1.00 8.04 C
ATOM 12 O2' A B 581 -33.384 124.182 195.232 1.00 8.04 O
ATOM 13 C1' A B 581 -35.716 123.927 195.730 1.00 8.04 C
ATOM 14 N9 A B 581 -36.897 123.317 195.139 1.00 0.79 N
ATOM 15 C8 A B 581 -38.192 123.720 195.328 1.00 0.79 C
ATOM 16 N7 A B 581 -39.074 122.985 194.698 1.00 0.79 N
ATOM 17 C5 A B 581 -38.304 122.044 194.045 1.00 0.79 C
ATOM 18 C6 A B 581 -38.648 120.990 193.215 1.00 0.79 C
ATOM 19 N6 A B 581 -39.907 120.708 192.887 1.00 0.79 N
ATOM 20 N1 A B 581 -37.652 120.225 192.724 1.00 0.79 N
ATOM 21 C2 A B 581 -36.392 120.528 193.061 1.00 0.79 C
ATOM 22 N3 A B 581 -35.942 121.509 193.841 1.00 0.79 N
ATOM 23 C4 A B 581 -36.962 122.237 194.306 1.00 0.79 C
ATOM 24 P G B 582 -34.142 128.034 193.419 1.00 5.20 P
ATOM 25 OP1 G B 582 -32.836 128.270 192.746 1.00 21.40 O
ATOM 26 OP2 G B 582 -34.749 129.097 194.250 1.00 21.40 O
ATOM 27 O5' G B 582 -35.234 127.587 192.351 1.00 15.26 O
TER
Atoms:
OP1: (-49.508,117.330,191.081)
OP2: (-47.993,115.839,189.606)
C3': (-45.230,120.218,190.758)
C1': (-43.481,118.922,191.692)
C5': (-47.074,118.826,191.878)
O6: (-40.427,115.319,188.001)
O4': (-44.710,118.505,192.256)
C8: (-43.796,117.044,190.015)
C2: (-39.500,117.769,190.385)
C6: (-40.573,116.177,188.875)
C5: (-41.780,116.652,189.455)
C4: (-41.713,117.629,190.421)
P: (-48.182,116.690,190.819)
C4': (-45.732,119.495,191.990)
C2': (-43.732,120.263,190.996)
O2': (-43.405,121.323,191.869)
N1: (-39.461,116.808,189.415)
N2: (-38.309,118.247,190.782)
N3: (-40.620,118.229,190.930)
N7: (-43.098,116.286,189.215)
N9: (-43.020,117.898,190.759)
O5': (-47.069,117.830,190.836)
O3': (-45.766,121.524,190.680)
OP2: (-47.993,115.839,189.606)
C3': (-45.230,120.218,190.758)
C1': (-43.481,118.922,191.692)
C5': (-47.074,118.826,191.878)
O6: (-40.427,115.319,188.001)
O4': (-44.710,118.505,192.256)
C8: (-43.796,117.044,190.015)
C2: (-39.500,117.769,190.385)
C6: (-40.573,116.177,188.875)
C5: (-41.780,116.652,189.455)
C4: (-41.713,117.629,190.421)
P: (-48.182,116.690,190.819)
C4': (-45.732,119.495,191.990)
C2': (-43.732,120.263,190.996)
O2': (-43.405,121.323,191.869)
N1: (-39.461,116.808,189.415)
N2: (-38.309,118.247,190.782)
N3: (-40.620,118.229,190.930)
N7: (-43.098,116.286,189.215)
N9: (-43.020,117.898,190.759)
O5': (-47.069,117.830,190.836)
O3': (-45.766,121.524,190.680)
OP1: (-39.928,127.865,195.864)
OP2: (-38.134,129.486,195.019)
C3': (-35.033,125.911,194.615)
C1': (-35.716,123.927,195.730)
C5': (-36.517,127.382,196.056)
O4': (-36.161,125.038,196.474)
C8: (-38.192,123.720,195.328)
O2': (-33.384,124.182,195.232)
C6: (-38.648,120.990,193.215)
C5: (-38.304,122.044,194.045)
C4: (-36.962,122.237,194.306)
P: (-38.778,128.151,194.973)
C4': (-35.524,126.250,196.004)
C2': (-34.680,124.427,194.724)
C2: (-36.392,120.528,193.061)
N1: (-37.652,120.225,192.724)
N3: (-35.942,121.509,193.841)
N6: (-39.907,120.708,192.887)
N7: (-39.074,122.985,194.698)
N9: (-36.897,123.317,195.139)
O5': (-37.657,127.063,195.256)
O3': (-33.920,126.725,194.297)
OP2: (-38.134,129.486,195.019)
C3': (-35.033,125.911,194.615)
C1': (-35.716,123.927,195.730)
C5': (-36.517,127.382,196.056)
O4': (-36.161,125.038,196.474)
C8: (-38.192,123.720,195.328)
O2': (-33.384,124.182,195.232)
C6: (-38.648,120.990,193.215)
C5: (-38.304,122.044,194.045)
C4: (-36.962,122.237,194.306)
P: (-38.778,128.151,194.973)
C4': (-35.524,126.250,196.004)
C2': (-34.680,124.427,194.724)
C2: (-36.392,120.528,193.061)
N1: (-37.652,120.225,192.724)
N3: (-35.942,121.509,193.841)
N6: (-39.907,120.708,192.887)
N7: (-39.074,122.985,194.698)
N9: (-36.897,123.317,195.139)
O5': (-37.657,127.063,195.256)
O3': (-33.920,126.725,194.297)
Image (generated by PyMOL):