ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8N:A663:A722

Extra

PDB:
ATOM 1 O3' G A 662 -53.480 45.451 10.876 1.00 4.76 O
ATOM 2 P A A 663 -53.017 44.748 12.229 1.00 29.08 P
ATOM 3 OP1 A A 663 -53.927 45.207 13.291 1.00 29.08 O
ATOM 4 OP2 A A 663 -51.563 44.982 12.374 1.00 29.08 O
ATOM 5 O5' A A 663 -53.284 43.234 11.923 1.00 29.08 O
ATOM 6 C5' A A 663 -54.597 42.742 11.942 1.00 29.08 C
ATOM 7 C4' A A 663 -54.622 41.277 11.687 1.00 29.08 C
ATOM 8 O4' A A 663 -55.925 40.762 12.026 1.00 29.08 O
ATOM 9 C3' A A 663 -54.384 40.862 10.248 1.00 29.08 C
ATOM 10 O3' A A 663 -52.999 40.731 9.953 1.00 29.08 O
ATOM 11 C2' A A 663 -55.146 39.552 10.143 1.00 29.08 C
ATOM 12 O2' A A 663 -54.354 38.477 10.623 1.00 29.08 O
ATOM 13 C1' A A 663 -56.306 39.773 11.115 1.00 29.08 C
ATOM 14 N9 A A 663 -57.534 40.227 10.450 1.00 29.70 N
ATOM 15 C8 A A 663 -57.986 41.521 10.364 1.00 29.70 C
ATOM 16 N7 A A 663 -59.133 41.634 9.738 1.00 29.70 N
ATOM 17 C5 A A 663 -59.471 40.317 9.432 1.00 29.70 C
ATOM 18 C6 A A 663 -60.580 39.753 8.775 1.00 29.70 C
ATOM 19 N6 A A 663 -61.610 40.458 8.285 1.00 29.70 N
ATOM 20 N1 A A 663 -60.586 38.407 8.638 1.00 29.70 N
ATOM 21 C2 A A 663 -59.558 37.691 9.124 1.00 29.70 C
ATOM 22 N3 A A 663 -58.466 38.103 9.760 1.00 29.70 N
ATOM 23 C4 A A 663 -58.494 39.439 9.880 1.00 29.70 C
ATOM 24 P G A 664 -52.382 41.369 8.612 1.00 10.73 P
ATOM 25 OP1 G A 664 -51.116 42.053 8.982 1.00 10.73 O
ATOM 26 OP2 G A 664 -53.455 42.151 7.980 1.00 10.73 O
ATOM 27 O5' G A 664 -52.059 40.103 7.721 1.00 10.73 O
TER

ATOM 1 O3' U B 721 -66.118 51.658 3.875 1.00 43.71 O
ATOM 2 P G B 722 -65.678 52.122 5.356 1.00 36.85 P
ATOM 3 OP1 G B 722 -66.871 52.726 6.016 1.00 36.85 O
ATOM 4 OP2 G B 722 -64.447 52.949 5.199 1.00 36.85 O
ATOM 5 O5' G B 722 -65.304 50.749 6.056 1.00 36.85 O
ATOM 6 C5' G B 722 -64.159 50.043 5.646 1.00 36.85 C
ATOM 7 C4' G B 722 -63.004 50.339 6.539 1.00 36.85 C
ATOM 8 O4' G B 722 -63.282 49.816 7.863 1.00 36.85 O
ATOM 9 C3' G B 722 -61.704 49.688 6.131 1.00 36.85 C
ATOM 10 O3' G B 722 -60.988 50.446 5.181 1.00 36.85 O
ATOM 11 C2' G B 722 -60.986 49.490 7.455 1.00 36.85 C
ATOM 12 O2' G B 722 -60.398 50.695 7.907 1.00 36.85 O
ATOM 13 C1' G B 722 -62.156 49.140 8.367 1.00 36.85 C
ATOM 14 N9 G B 722 -62.451 47.700 8.327 1.00 37.10 N
ATOM 15 C8 G B 722 -63.615 47.170 7.845 1.00 37.10 C
ATOM 16 N7 G B 722 -63.615 45.875 7.863 1.00 37.10 N
ATOM 17 C5 G B 722 -62.380 45.531 8.378 1.00 37.10 C
ATOM 18 C6 G B 722 -61.829 44.255 8.624 1.00 37.10 C
ATOM 19 O6 G B 722 -62.332 43.141 8.434 1.00 37.10 O
ATOM 20 N1 G B 722 -60.554 44.351 9.147 1.00 37.10 N
ATOM 21 C2 G B 722 -59.902 45.523 9.395 1.00 37.10 C
ATOM 22 N2 G B 722 -58.671 45.388 9.900 1.00 37.10 N
ATOM 23 N3 G B 722 -60.403 46.722 9.170 1.00 37.10 N
ATOM 24 C4 G B 722 -61.642 46.647 8.665 1.00 37.10 C
ATOM 25 P G B 723 -60.149 49.702 4.034 1.00 24.12 P
ATOM 26 OP1 G B 723 -59.523 50.739 3.206 1.00 24.12 O
ATOM 27 OP2 G B 723 -61.045 48.725 3.383 1.00 24.12 O
ATOM 28 O5' G B 723 -59.036 48.939 4.859 1.00 24.12 O
TER

Atoms:
OP1: (-53.927,45.207,13.291)
OP2: (-51.563,44.982,12.374)
C3': (-54.384,40.862,10.248)
C1': (-56.306,39.773,11.115)
C5': (-54.597,42.742,11.942)
O4': (-55.925,40.762,12.026)
C8: (-57.986,41.521,10.364)
O2': (-54.354,38.477,10.623)
C6: (-60.580,39.753,8.775)
C5: (-59.471,40.317,9.432)
C4: (-58.494,39.439,9.880)
P: (-53.017,44.748,12.229)
C4': (-54.622,41.277,11.687)
C2': (-55.146,39.552,10.143)
C2: (-59.558,37.691,9.124)
N1: (-60.586,38.407,8.638)
N3: (-58.466,38.103,9.760)
N6: (-61.610,40.458,8.285)
N7: (-59.133,41.634,9.738)
N9: (-57.534,40.227,10.450)
O5': (-53.284,43.234,11.923)
O3': (-52.999,40.731,9.953)
OP1: (-66.871,52.726,6.016)
OP2: (-64.447,52.949,5.199)
C3': (-61.704,49.688,6.131)
C1': (-62.156,49.140,8.367)
C5': (-64.159,50.043,5.646)
O6: (-62.332,43.141,8.434)
O4': (-63.282,49.816,7.863)
C8: (-63.615,47.170,7.845)
C2: (-59.902,45.523,9.395)
C6: (-61.829,44.255,8.624)
C5: (-62.380,45.531,8.378)
C4: (-61.642,46.647,8.665)
P: (-65.678,52.122,5.356)
C4': (-63.004,50.339,6.539)
C2': (-60.986,49.490,7.455)
O2': (-60.398,50.695,7.907)
N1: (-60.554,44.351,9.147)
N2: (-58.671,45.388,9.900)
N3: (-60.403,46.722,9.170)
N7: (-63.615,45.875,7.863)
N9: (-62.451,47.700,8.327)
O5': (-65.304,50.749,6.056)
O3': (-60.988,50.446,5.181)
Image (generated by PyMOL):
PyMOL image
show in jmol