Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01077:01078
Extra
PDB:
ATOM 1 O3' A A1076 36.346 105.326 144.079 1.00 42.93 O
ATOM 2 P A A1077 37.853 105.597 144.556 1.00 45.54 P
ATOM 3 OP1 A A1077 38.217 104.584 145.572 1.00 45.75 O
ATOM 4 OP2 A A1077 37.978 107.041 144.885 1.00 44.80 O
ATOM 5 O5' A A1077 38.710 105.283 143.250 1.00 45.79 O
ATOM 6 C5' A A1077 38.611 106.127 142.092 1.00 45.53 C
ATOM 7 C4' A A1077 39.373 105.530 140.935 1.00 45.02 C
ATOM 8 O4' A A1077 38.798 104.235 140.575 1.00 45.18 O
ATOM 9 C3' A A1077 39.280 106.341 139.652 1.00 43.96 C
ATOM 10 O3' A A1077 40.102 107.485 139.568 1.00 43.19 O
ATOM 11 C2' A A1077 39.427 105.278 138.581 1.00 44.36 C
ATOM 12 O2' A A1077 40.751 104.820 138.415 1.00 44.14 O
ATOM 13 C1' A A1077 38.519 104.206 139.181 1.00 44.68 C
ATOM 14 N9 A A1077 37.119 104.607 139.010 1.00 45.50 N
ATOM 15 C8 A A1077 36.614 105.892 138.940 1.00 45.57 C
ATOM 16 N7 A A1077 35.322 105.952 138.785 1.00 44.91 N
ATOM 17 C5 A A1077 34.940 104.628 138.756 1.00 45.09 C
ATOM 18 C6 A A1077 33.697 104.041 138.623 1.00 46.61 C
ATOM 19 N6 A A1077 32.574 104.738 138.506 1.00 44.42 N
ATOM 20 N1 A A1077 33.640 102.693 138.619 1.00 50.91 N
ATOM 21 C2 A A1077 34.791 101.999 138.750 1.00 51.17 C
ATOM 22 N3 A A1077 36.034 102.447 138.894 1.00 47.02 N
ATOM 23 C4 A A1077 36.038 103.786 138.888 1.00 45.54 C
ATOM 24 P G A1078 39.404 108.914 139.330 1.00 43.63 P
ATOM 25 OP1 G A1078 40.472 109.922 139.149 1.00 43.63 O
ATOM 26 OP2 G A1078 38.372 109.119 140.378 1.00 43.90 O
ATOM 27 O5' G A1078 38.670 108.735 137.932 1.00 41.55 O
TER
ATOM 1 O3' A B1077 40.102 107.485 139.568 1.00 43.19 O
ATOM 2 P G B1078 39.404 108.914 139.330 1.00 43.63 P
ATOM 3 OP1 G B1078 40.472 109.922 139.149 1.00 43.63 O
ATOM 4 OP2 G B1078 38.372 109.119 140.378 1.00 43.90 O
ATOM 5 O5' G B1078 38.670 108.735 137.932 1.00 41.55 O
ATOM 6 C5' G B1078 37.245 108.774 137.822 1.00 38.66 C
ATOM 7 C4' G B1078 36.843 108.333 136.443 1.00 39.13 C
ATOM 8 O4' G B1078 35.398 108.288 136.334 1.00 39.66 O
ATOM 9 C3' G B1078 37.320 109.244 135.319 1.00 39.14 C
ATOM 10 O3' G B1078 37.542 108.447 134.174 1.00 40.61 O
ATOM 11 C2' G B1078 36.108 110.129 135.068 1.00 38.68 C
ATOM 12 O2' G B1078 36.087 110.667 133.761 1.00 37.48 O
ATOM 13 C1' G B1078 34.988 109.113 135.263 1.00 38.28 C
ATOM 14 N9 G B1078 33.650 109.626 135.546 1.00 36.50 N
ATOM 15 C8 G B1078 33.277 110.900 135.901 1.00 37.39 C
ATOM 16 N7 G B1078 31.983 111.036 136.018 1.00 37.02 N
ATOM 17 C5 G B1078 31.481 109.773 135.733 1.00 33.33 C
ATOM 18 C6 G B1078 30.155 109.304 135.680 1.00 31.81 C
ATOM 19 O6 G B1078 29.114 109.929 135.848 1.00 35.58 O
ATOM 20 N1 G B1078 30.103 107.954 135.384 1.00 30.47 N
ATOM 21 C2 G B1078 31.187 107.162 135.159 1.00 30.82 C
ATOM 22 N2 G B1078 30.952 105.888 134.921 1.00 28.88 N
ATOM 23 N3 G B1078 32.420 107.589 135.175 1.00 33.86 N
ATOM 24 C4 G B1078 32.497 108.894 135.467 1.00 34.24 C
ATOM 25 P U B1079 39.020 107.953 133.833 1.00 43.21 P
ATOM 26 OP1 U B1079 39.974 108.885 134.468 1.00 44.68 O
ATOM 27 OP2 U B1079 39.072 107.729 132.365 1.00 42.68 O
ATOM 28 O5' U B1079 39.128 106.544 134.555 1.00 41.97 O
TER
ATOM 2 P A A1077 37.853 105.597 144.556 1.00 45.54 P
ATOM 3 OP1 A A1077 38.217 104.584 145.572 1.00 45.75 O
ATOM 4 OP2 A A1077 37.978 107.041 144.885 1.00 44.80 O
ATOM 5 O5' A A1077 38.710 105.283 143.250 1.00 45.79 O
ATOM 6 C5' A A1077 38.611 106.127 142.092 1.00 45.53 C
ATOM 7 C4' A A1077 39.373 105.530 140.935 1.00 45.02 C
ATOM 8 O4' A A1077 38.798 104.235 140.575 1.00 45.18 O
ATOM 9 C3' A A1077 39.280 106.341 139.652 1.00 43.96 C
ATOM 10 O3' A A1077 40.102 107.485 139.568 1.00 43.19 O
ATOM 11 C2' A A1077 39.427 105.278 138.581 1.00 44.36 C
ATOM 12 O2' A A1077 40.751 104.820 138.415 1.00 44.14 O
ATOM 13 C1' A A1077 38.519 104.206 139.181 1.00 44.68 C
ATOM 14 N9 A A1077 37.119 104.607 139.010 1.00 45.50 N
ATOM 15 C8 A A1077 36.614 105.892 138.940 1.00 45.57 C
ATOM 16 N7 A A1077 35.322 105.952 138.785 1.00 44.91 N
ATOM 17 C5 A A1077 34.940 104.628 138.756 1.00 45.09 C
ATOM 18 C6 A A1077 33.697 104.041 138.623 1.00 46.61 C
ATOM 19 N6 A A1077 32.574 104.738 138.506 1.00 44.42 N
ATOM 20 N1 A A1077 33.640 102.693 138.619 1.00 50.91 N
ATOM 21 C2 A A1077 34.791 101.999 138.750 1.00 51.17 C
ATOM 22 N3 A A1077 36.034 102.447 138.894 1.00 47.02 N
ATOM 23 C4 A A1077 36.038 103.786 138.888 1.00 45.54 C
ATOM 24 P G A1078 39.404 108.914 139.330 1.00 43.63 P
ATOM 25 OP1 G A1078 40.472 109.922 139.149 1.00 43.63 O
ATOM 26 OP2 G A1078 38.372 109.119 140.378 1.00 43.90 O
ATOM 27 O5' G A1078 38.670 108.735 137.932 1.00 41.55 O
TER
ATOM 1 O3' A B1077 40.102 107.485 139.568 1.00 43.19 O
ATOM 2 P G B1078 39.404 108.914 139.330 1.00 43.63 P
ATOM 3 OP1 G B1078 40.472 109.922 139.149 1.00 43.63 O
ATOM 4 OP2 G B1078 38.372 109.119 140.378 1.00 43.90 O
ATOM 5 O5' G B1078 38.670 108.735 137.932 1.00 41.55 O
ATOM 6 C5' G B1078 37.245 108.774 137.822 1.00 38.66 C
ATOM 7 C4' G B1078 36.843 108.333 136.443 1.00 39.13 C
ATOM 8 O4' G B1078 35.398 108.288 136.334 1.00 39.66 O
ATOM 9 C3' G B1078 37.320 109.244 135.319 1.00 39.14 C
ATOM 10 O3' G B1078 37.542 108.447 134.174 1.00 40.61 O
ATOM 11 C2' G B1078 36.108 110.129 135.068 1.00 38.68 C
ATOM 12 O2' G B1078 36.087 110.667 133.761 1.00 37.48 O
ATOM 13 C1' G B1078 34.988 109.113 135.263 1.00 38.28 C
ATOM 14 N9 G B1078 33.650 109.626 135.546 1.00 36.50 N
ATOM 15 C8 G B1078 33.277 110.900 135.901 1.00 37.39 C
ATOM 16 N7 G B1078 31.983 111.036 136.018 1.00 37.02 N
ATOM 17 C5 G B1078 31.481 109.773 135.733 1.00 33.33 C
ATOM 18 C6 G B1078 30.155 109.304 135.680 1.00 31.81 C
ATOM 19 O6 G B1078 29.114 109.929 135.848 1.00 35.58 O
ATOM 20 N1 G B1078 30.103 107.954 135.384 1.00 30.47 N
ATOM 21 C2 G B1078 31.187 107.162 135.159 1.00 30.82 C
ATOM 22 N2 G B1078 30.952 105.888 134.921 1.00 28.88 N
ATOM 23 N3 G B1078 32.420 107.589 135.175 1.00 33.86 N
ATOM 24 C4 G B1078 32.497 108.894 135.467 1.00 34.24 C
ATOM 25 P U B1079 39.020 107.953 133.833 1.00 43.21 P
ATOM 26 OP1 U B1079 39.974 108.885 134.468 1.00 44.68 O
ATOM 27 OP2 U B1079 39.072 107.729 132.365 1.00 42.68 O
ATOM 28 O5' U B1079 39.128 106.544 134.555 1.00 41.97 O
TER
Atoms:
OP1: (38.217,104.584,145.572)
OP2: (37.978,107.041,144.885)
C3': (39.280,106.341,139.652)
C1': (38.519,104.206,139.181)
C5': (38.611,106.127,142.092)
O4': (38.798,104.235,140.575)
C8: (36.614,105.892,138.940)
O2': (40.751,104.820,138.415)
C6: (33.697,104.041,138.623)
C5: (34.940,104.628,138.756)
C4: (36.038,103.786,138.888)
P: (37.853,105.597,144.556)
C4': (39.373,105.530,140.935)
C2': (39.427,105.278,138.581)
C2: (34.791,101.999,138.750)
N1: (33.640,102.693,138.619)
N3: (36.034,102.447,138.894)
N6: (32.574,104.738,138.506)
N7: (35.322,105.952,138.785)
N9: (37.119,104.607,139.010)
O5': (38.710,105.283,143.250)
O3': (40.102,107.485,139.568)
OP2: (37.978,107.041,144.885)
C3': (39.280,106.341,139.652)
C1': (38.519,104.206,139.181)
C5': (38.611,106.127,142.092)
O4': (38.798,104.235,140.575)
C8: (36.614,105.892,138.940)
O2': (40.751,104.820,138.415)
C6: (33.697,104.041,138.623)
C5: (34.940,104.628,138.756)
C4: (36.038,103.786,138.888)
P: (37.853,105.597,144.556)
C4': (39.373,105.530,140.935)
C2': (39.427,105.278,138.581)
C2: (34.791,101.999,138.750)
N1: (33.640,102.693,138.619)
N3: (36.034,102.447,138.894)
N6: (32.574,104.738,138.506)
N7: (35.322,105.952,138.785)
N9: (37.119,104.607,139.010)
O5': (38.710,105.283,143.250)
O3': (40.102,107.485,139.568)
OP1: (40.472,109.922,139.149)
OP2: (38.372,109.119,140.378)
C3': (37.320,109.244,135.319)
C1': (34.988,109.113,135.263)
C5': (37.245,108.774,137.822)
O6: (29.114,109.929,135.848)
O4': (35.398,108.288,136.334)
C8: (33.277,110.900,135.901)
C2: (31.187,107.162,135.159)
C6: (30.155,109.304,135.680)
C5: (31.481,109.773,135.733)
C4: (32.497,108.894,135.467)
P: (39.404,108.914,139.330)
C4': (36.843,108.333,136.443)
C2': (36.108,110.129,135.068)
O2': (36.087,110.667,133.761)
N1: (30.103,107.954,135.384)
N2: (30.952,105.888,134.921)
N3: (32.420,107.589,135.175)
N7: (31.983,111.036,136.018)
N9: (33.650,109.626,135.546)
O5': (38.670,108.735,137.932)
O3': (37.542,108.447,134.174)
OP2: (38.372,109.119,140.378)
C3': (37.320,109.244,135.319)
C1': (34.988,109.113,135.263)
C5': (37.245,108.774,137.822)
O6: (29.114,109.929,135.848)
O4': (35.398,108.288,136.334)
C8: (33.277,110.900,135.901)
C2: (31.187,107.162,135.159)
C6: (30.155,109.304,135.680)
C5: (31.481,109.773,135.733)
C4: (32.497,108.894,135.467)
P: (39.404,108.914,139.330)
C4': (36.843,108.333,136.443)
C2': (36.108,110.129,135.068)
O2': (36.087,110.667,133.761)
N1: (30.103,107.954,135.384)
N2: (30.952,105.888,134.921)
N3: (32.420,107.589,135.175)
N7: (31.983,111.036,136.018)
N9: (33.650,109.626,135.546)
O5': (38.670,108.735,137.932)
O3': (37.542,108.447,134.174)
Image (generated by PyMOL):