Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3NPN:A6:A40
Extra
PDB:
ATOM 1 O3' A A 5 118.755 80.999 -10.862 1.00 65.66 O
ATOM 2 P G A 6 118.819 79.538 -11.514 1.00 65.71 P
ATOM 3 OP1 G A 6 118.289 79.637 -12.891 1.00 66.94 O
ATOM 4 OP2 G A 6 118.222 78.564 -10.572 1.00 64.53 O
ATOM 5 O5' G A 6 120.393 79.259 -11.562 1.00 66.34 O
ATOM 6 C5' G A 6 121.266 80.152 -12.250 1.00 68.01 C
ATOM 7 C4' G A 6 122.715 79.840 -11.932 1.00 68.79 C
ATOM 8 O4' G A 6 122.970 80.045 -10.520 1.00 67.89 O
ATOM 9 C3' G A 6 123.137 78.400 -12.178 1.00 69.16 C
ATOM 10 O3' G A 6 123.394 78.202 -13.566 1.00 71.04 O
ATOM 11 C2' G A 6 124.385 78.316 -11.305 1.00 69.34 C
ATOM 12 O2' G A 6 125.525 78.904 -11.905 1.00 71.14 O
ATOM 13 C1' G A 6 123.953 79.124 -10.079 1.00 68.19 C
ATOM 14 N9 G A 6 123.398 78.298 -9.002 1.00 66.95 N
ATOM 15 C8 G A 6 122.074 77.989 -8.795 1.00 65.91 C
ATOM 16 N7 G A 6 121.866 77.227 -7.758 1.00 64.98 N
ATOM 17 C5 G A 6 123.134 77.010 -7.240 1.00 65.59 C
ATOM 18 C6 G A 6 123.538 76.257 -6.107 1.00 65.42 C
ATOM 19 O6 G A 6 122.824 75.614 -5.323 1.00 64.59 O
ATOM 20 N1 G A 6 124.922 76.289 -5.918 1.00 66.59 N
ATOM 21 C2 G A 6 125.807 76.972 -6.726 1.00 67.89 C
ATOM 22 N2 G A 6 127.104 76.888 -6.393 1.00 68.94 N
ATOM 23 N3 G A 6 125.438 77.682 -7.791 1.00 68.24 N
ATOM 24 C4 G A 6 124.091 77.661 -7.992 1.00 66.89 C
ATOM 25 P G A 7 123.150 76.793 -14.291 1.00 71.63 P
ATOM 26 OP1 G A 7 123.973 75.785 -13.590 1.00 71.14 O
ATOM 27 OP2 G A 7 123.355 77.021 -15.738 1.00 73.82 O
ATOM 28 O5' G A 7 121.605 76.430 -14.066 1.00 71.04 O
TER
ATOM 1 O3' A B 39 132.069 84.009 -14.082 1.00 93.62 O
ATOM 2 P A B 40 132.292 82.621 -14.851 1.00 93.99 P
ATOM 3 OP1 A B 40 133.284 82.865 -15.923 1.00 97.26 O
ATOM 4 OP2 A B 40 130.970 82.049 -15.196 1.00 91.94 O
ATOM 5 O5' A B 40 132.943 81.690 -13.723 1.00 93.01 O
ATOM 6 C5' A B 40 134.295 81.884 -13.313 1.00 94.70 C
ATOM 7 C4' A B 40 134.580 81.181 -11.998 1.00 93.21 C
ATOM 8 O4' A B 40 133.649 81.646 -10.987 1.00 90.53 O
ATOM 9 C3' A B 40 134.409 79.668 -12.013 1.00 92.08 C
ATOM 10 O3' A B 40 135.595 79.035 -12.486 1.00 94.62 O
ATOM 11 C2' A B 40 134.136 79.371 -10.542 1.00 89.96 C
ATOM 12 O2' A B 40 135.314 79.301 -9.760 1.00 91.63 O
ATOM 13 C1' A B 40 133.287 80.574 -10.134 1.00 88.51 C
ATOM 14 N9 A B 40 131.848 80.325 -10.246 1.00 85.87 N
ATOM 15 C8 A B 40 131.022 80.667 -11.282 1.00 85.49 C
ATOM 16 N7 A B 40 129.771 80.313 -11.111 1.00 83.18 N
ATOM 17 C5 A B 40 129.772 79.691 -9.875 1.00 81.95 C
ATOM 18 C6 A B 40 128.749 79.085 -9.111 1.00 79.76 C
ATOM 19 N6 A B 40 127.476 79.013 -9.511 1.00 78.44 N
ATOM 20 N1 A B 40 129.085 78.556 -7.913 1.00 79.33 N
ATOM 21 C2 A B 40 130.362 78.627 -7.509 1.00 81.01 C
ATOM 22 N3 A B 40 131.407 79.169 -8.139 1.00 83.13 N
ATOM 23 C4 A B 40 131.044 79.688 -9.327 1.00 83.51 C
ATOM 24 P C B 41 135.530 77.625 -13.246 1.00 94.66 P
ATOM 25 OP1 C B 41 136.853 77.398 -13.870 1.00 97.99 O
ATOM 26 OP2 C B 41 134.311 77.592 -14.091 1.00 93.14 O
ATOM 27 O5' C B 41 135.353 76.590 -12.036 1.00 92.42 O
TER
ATOM 2 P G A 6 118.819 79.538 -11.514 1.00 65.71 P
ATOM 3 OP1 G A 6 118.289 79.637 -12.891 1.00 66.94 O
ATOM 4 OP2 G A 6 118.222 78.564 -10.572 1.00 64.53 O
ATOM 5 O5' G A 6 120.393 79.259 -11.562 1.00 66.34 O
ATOM 6 C5' G A 6 121.266 80.152 -12.250 1.00 68.01 C
ATOM 7 C4' G A 6 122.715 79.840 -11.932 1.00 68.79 C
ATOM 8 O4' G A 6 122.970 80.045 -10.520 1.00 67.89 O
ATOM 9 C3' G A 6 123.137 78.400 -12.178 1.00 69.16 C
ATOM 10 O3' G A 6 123.394 78.202 -13.566 1.00 71.04 O
ATOM 11 C2' G A 6 124.385 78.316 -11.305 1.00 69.34 C
ATOM 12 O2' G A 6 125.525 78.904 -11.905 1.00 71.14 O
ATOM 13 C1' G A 6 123.953 79.124 -10.079 1.00 68.19 C
ATOM 14 N9 G A 6 123.398 78.298 -9.002 1.00 66.95 N
ATOM 15 C8 G A 6 122.074 77.989 -8.795 1.00 65.91 C
ATOM 16 N7 G A 6 121.866 77.227 -7.758 1.00 64.98 N
ATOM 17 C5 G A 6 123.134 77.010 -7.240 1.00 65.59 C
ATOM 18 C6 G A 6 123.538 76.257 -6.107 1.00 65.42 C
ATOM 19 O6 G A 6 122.824 75.614 -5.323 1.00 64.59 O
ATOM 20 N1 G A 6 124.922 76.289 -5.918 1.00 66.59 N
ATOM 21 C2 G A 6 125.807 76.972 -6.726 1.00 67.89 C
ATOM 22 N2 G A 6 127.104 76.888 -6.393 1.00 68.94 N
ATOM 23 N3 G A 6 125.438 77.682 -7.791 1.00 68.24 N
ATOM 24 C4 G A 6 124.091 77.661 -7.992 1.00 66.89 C
ATOM 25 P G A 7 123.150 76.793 -14.291 1.00 71.63 P
ATOM 26 OP1 G A 7 123.973 75.785 -13.590 1.00 71.14 O
ATOM 27 OP2 G A 7 123.355 77.021 -15.738 1.00 73.82 O
ATOM 28 O5' G A 7 121.605 76.430 -14.066 1.00 71.04 O
TER
ATOM 1 O3' A B 39 132.069 84.009 -14.082 1.00 93.62 O
ATOM 2 P A B 40 132.292 82.621 -14.851 1.00 93.99 P
ATOM 3 OP1 A B 40 133.284 82.865 -15.923 1.00 97.26 O
ATOM 4 OP2 A B 40 130.970 82.049 -15.196 1.00 91.94 O
ATOM 5 O5' A B 40 132.943 81.690 -13.723 1.00 93.01 O
ATOM 6 C5' A B 40 134.295 81.884 -13.313 1.00 94.70 C
ATOM 7 C4' A B 40 134.580 81.181 -11.998 1.00 93.21 C
ATOM 8 O4' A B 40 133.649 81.646 -10.987 1.00 90.53 O
ATOM 9 C3' A B 40 134.409 79.668 -12.013 1.00 92.08 C
ATOM 10 O3' A B 40 135.595 79.035 -12.486 1.00 94.62 O
ATOM 11 C2' A B 40 134.136 79.371 -10.542 1.00 89.96 C
ATOM 12 O2' A B 40 135.314 79.301 -9.760 1.00 91.63 O
ATOM 13 C1' A B 40 133.287 80.574 -10.134 1.00 88.51 C
ATOM 14 N9 A B 40 131.848 80.325 -10.246 1.00 85.87 N
ATOM 15 C8 A B 40 131.022 80.667 -11.282 1.00 85.49 C
ATOM 16 N7 A B 40 129.771 80.313 -11.111 1.00 83.18 N
ATOM 17 C5 A B 40 129.772 79.691 -9.875 1.00 81.95 C
ATOM 18 C6 A B 40 128.749 79.085 -9.111 1.00 79.76 C
ATOM 19 N6 A B 40 127.476 79.013 -9.511 1.00 78.44 N
ATOM 20 N1 A B 40 129.085 78.556 -7.913 1.00 79.33 N
ATOM 21 C2 A B 40 130.362 78.627 -7.509 1.00 81.01 C
ATOM 22 N3 A B 40 131.407 79.169 -8.139 1.00 83.13 N
ATOM 23 C4 A B 40 131.044 79.688 -9.327 1.00 83.51 C
ATOM 24 P C B 41 135.530 77.625 -13.246 1.00 94.66 P
ATOM 25 OP1 C B 41 136.853 77.398 -13.870 1.00 97.99 O
ATOM 26 OP2 C B 41 134.311 77.592 -14.091 1.00 93.14 O
ATOM 27 O5' C B 41 135.353 76.590 -12.036 1.00 92.42 O
TER
Atoms:
OP1: (118.289,79.637,-12.891)
OP2: (118.222,78.564,-10.572)
C3': (123.137,78.400,-12.178)
C1': (123.953,79.124,-10.079)
C5': (121.266,80.152,-12.250)
O6: (122.824,75.614,-5.323)
O4': (122.970,80.045,-10.520)
C8: (122.074,77.989,-8.795)
C2: (125.807,76.972,-6.726)
C6: (123.538,76.257,-6.107)
C5: (123.134,77.010,-7.240)
C4: (124.091,77.661,-7.992)
P: (118.819,79.538,-11.514)
C4': (122.715,79.840,-11.932)
C2': (124.385,78.316,-11.305)
O2': (125.525,78.904,-11.905)
N1: (124.922,76.289,-5.918)
N2: (127.104,76.888,-6.393)
N3: (125.438,77.682,-7.791)
N7: (121.866,77.227,-7.758)
N9: (123.398,78.298,-9.002)
O5': (120.393,79.259,-11.562)
O3': (123.394,78.202,-13.566)
OP2: (118.222,78.564,-10.572)
C3': (123.137,78.400,-12.178)
C1': (123.953,79.124,-10.079)
C5': (121.266,80.152,-12.250)
O6: (122.824,75.614,-5.323)
O4': (122.970,80.045,-10.520)
C8: (122.074,77.989,-8.795)
C2: (125.807,76.972,-6.726)
C6: (123.538,76.257,-6.107)
C5: (123.134,77.010,-7.240)
C4: (124.091,77.661,-7.992)
P: (118.819,79.538,-11.514)
C4': (122.715,79.840,-11.932)
C2': (124.385,78.316,-11.305)
O2': (125.525,78.904,-11.905)
N1: (124.922,76.289,-5.918)
N2: (127.104,76.888,-6.393)
N3: (125.438,77.682,-7.791)
N7: (121.866,77.227,-7.758)
N9: (123.398,78.298,-9.002)
O5': (120.393,79.259,-11.562)
O3': (123.394,78.202,-13.566)
OP1: (133.284,82.865,-15.923)
OP2: (130.970,82.049,-15.196)
C3': (134.409,79.668,-12.013)
C1': (133.287,80.574,-10.134)
C5': (134.295,81.884,-13.313)
O4': (133.649,81.646,-10.987)
C8: (131.022,80.667,-11.282)
O2': (135.314,79.301,-9.760)
C6: (128.749,79.085,-9.111)
C5: (129.772,79.691,-9.875)
C4: (131.044,79.688,-9.327)
P: (132.292,82.621,-14.851)
C4': (134.580,81.181,-11.998)
C2': (134.136,79.371,-10.542)
C2: (130.362,78.627,-7.509)
N1: (129.085,78.556,-7.913)
N3: (131.407,79.169,-8.139)
N6: (127.476,79.013,-9.511)
N7: (129.771,80.313,-11.111)
N9: (131.848,80.325,-10.246)
O5': (132.943,81.690,-13.723)
O3': (135.595,79.035,-12.486)
OP2: (130.970,82.049,-15.196)
C3': (134.409,79.668,-12.013)
C1': (133.287,80.574,-10.134)
C5': (134.295,81.884,-13.313)
O4': (133.649,81.646,-10.987)
C8: (131.022,80.667,-11.282)
O2': (135.314,79.301,-9.760)
C6: (128.749,79.085,-9.111)
C5: (129.772,79.691,-9.875)
C4: (131.044,79.688,-9.327)
P: (132.292,82.621,-14.851)
C4': (134.580,81.181,-11.998)
C2': (134.136,79.371,-10.542)
C2: (130.362,78.627,-7.509)
N1: (129.085,78.556,-7.913)
N3: (131.407,79.169,-8.139)
N6: (127.476,79.013,-9.511)
N7: (129.771,80.313,-11.111)
N9: (131.848,80.325,-10.246)
O5': (132.943,81.690,-13.723)
O3': (135.595,79.035,-12.486)
Image (generated by PyMOL):