Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0302:0325
Extra
PDB:
ATOM 1 O3' U A 301 1.233 145.022 52.893 1.00 55.36 O
ATOM 2 P G A 302 1.601 146.576 52.964 1.00 54.98 P
ATOM 3 OP1 G A 302 1.497 147.013 54.373 1.00 54.25 O
ATOM 4 OP2 G A 302 0.809 147.268 51.920 1.00 54.88 O
ATOM 5 O5' G A 302 3.130 146.621 52.530 1.00 55.03 O
ATOM 6 C5' G A 302 4.120 145.894 53.268 1.00 54.16 C
ATOM 7 C4' G A 302 5.435 145.875 52.523 1.00 53.43 C
ATOM 8 O4' G A 302 5.313 145.110 51.294 1.00 54.64 O
ATOM 9 C3' G A 302 5.967 147.213 52.048 1.00 52.64 C
ATOM 10 O3' G A 302 6.575 147.942 53.099 1.00 52.07 O
ATOM 11 C2' G A 302 6.973 146.772 50.999 1.00 53.44 C
ATOM 12 O2' G A 302 8.151 146.253 51.572 1.00 55.11 O
ATOM 13 C1' G A 302 6.214 145.626 50.328 1.00 54.42 C
ATOM 14 N9 G A 302 5.456 146.124 49.185 1.00 55.70 N
ATOM 15 C8 G A 302 4.204 146.688 49.195 1.00 55.51 C
ATOM 16 N7 G A 302 3.829 147.124 48.024 1.00 57.15 N
ATOM 17 C5 G A 302 4.890 146.811 47.184 1.00 58.28 C
ATOM 18 C6 G A 302 5.071 147.058 45.794 1.00 59.63 C
ATOM 19 O6 G A 302 4.313 147.641 45.008 1.00 62.71 O
ATOM 20 N1 G A 302 6.289 146.559 45.342 1.00 59.11 N
ATOM 21 C2 G A 302 7.221 145.919 46.122 1.00 58.18 C
ATOM 22 N2 G A 302 8.333 145.500 45.497 1.00 56.80 N
ATOM 23 N3 G A 302 7.073 145.701 47.419 1.00 57.75 N
ATOM 24 C4 G A 302 5.891 146.169 47.880 1.00 57.29 C
ATOM 25 P G A 303 6.369 149.533 53.187 1.00 51.48 P
ATOM 26 OP1 G A 303 7.162 150.039 54.335 1.00 51.20 O
ATOM 27 OP2 G A 303 4.914 149.801 53.131 1.00 52.89 O
ATOM 28 O5' G A 303 7.021 150.069 51.840 1.00 50.98 O
TER
ATOM 1 O3' G B 324 16.375 145.288 46.858 1.00 43.27 O
ATOM 2 P A B 325 17.239 144.054 47.414 1.00 42.80 P
ATOM 3 OP1 A B 325 17.637 144.421 48.785 1.00 44.84 O
ATOM 4 OP2 A B 325 18.283 143.662 46.427 1.00 42.00 O
ATOM 5 O5' A B 325 16.185 142.875 47.531 1.00 44.09 O
ATOM 6 C5' A B 325 15.969 141.959 46.450 1.00 44.89 C
ATOM 7 C4' A B 325 15.608 140.614 47.009 1.00 45.46 C
ATOM 8 O4' A B 325 14.599 140.788 48.039 1.00 45.18 O
ATOM 9 C3' A B 325 15.045 139.595 46.033 1.00 46.32 C
ATOM 10 O3' A B 325 15.437 138.324 46.524 1.00 48.52 O
ATOM 11 C2' A B 325 13.539 139.771 46.224 1.00 46.02 C
ATOM 12 O2' A B 325 12.771 138.635 45.886 1.00 48.92 O
ATOM 13 C1' A B 325 13.469 140.006 47.729 1.00 44.36 C
ATOM 14 N9 A B 325 12.284 140.710 48.206 1.00 43.76 N
ATOM 15 C8 A B 325 11.487 140.358 49.265 1.00 43.59 C
ATOM 16 N7 A B 325 10.499 141.187 49.482 1.00 42.93 N
ATOM 17 C5 A B 325 10.648 142.148 48.493 1.00 42.98 C
ATOM 18 C6 A B 325 9.914 143.298 48.177 1.00 42.55 C
ATOM 19 N6 A B 325 8.837 143.703 48.853 1.00 42.36 N
ATOM 20 N1 A B 325 10.331 144.035 47.130 1.00 44.65 N
ATOM 21 C2 A B 325 11.415 143.637 46.455 1.00 44.43 C
ATOM 22 N3 A B 325 12.187 142.578 46.655 1.00 43.24 N
ATOM 23 C4 A B 325 11.744 141.866 47.700 1.00 43.52 C
ATOM 24 P C B 326 16.625 137.516 45.819 1.00 50.69 P
ATOM 25 OP1 C B 326 17.390 136.836 46.896 1.00 51.38 O
ATOM 26 OP2 C B 326 17.340 138.399 44.871 1.00 52.58 O
ATOM 27 O5' C B 326 15.848 136.418 44.971 1.00 52.29 O
TER
ATOM 2 P G A 302 1.601 146.576 52.964 1.00 54.98 P
ATOM 3 OP1 G A 302 1.497 147.013 54.373 1.00 54.25 O
ATOM 4 OP2 G A 302 0.809 147.268 51.920 1.00 54.88 O
ATOM 5 O5' G A 302 3.130 146.621 52.530 1.00 55.03 O
ATOM 6 C5' G A 302 4.120 145.894 53.268 1.00 54.16 C
ATOM 7 C4' G A 302 5.435 145.875 52.523 1.00 53.43 C
ATOM 8 O4' G A 302 5.313 145.110 51.294 1.00 54.64 O
ATOM 9 C3' G A 302 5.967 147.213 52.048 1.00 52.64 C
ATOM 10 O3' G A 302 6.575 147.942 53.099 1.00 52.07 O
ATOM 11 C2' G A 302 6.973 146.772 50.999 1.00 53.44 C
ATOM 12 O2' G A 302 8.151 146.253 51.572 1.00 55.11 O
ATOM 13 C1' G A 302 6.214 145.626 50.328 1.00 54.42 C
ATOM 14 N9 G A 302 5.456 146.124 49.185 1.00 55.70 N
ATOM 15 C8 G A 302 4.204 146.688 49.195 1.00 55.51 C
ATOM 16 N7 G A 302 3.829 147.124 48.024 1.00 57.15 N
ATOM 17 C5 G A 302 4.890 146.811 47.184 1.00 58.28 C
ATOM 18 C6 G A 302 5.071 147.058 45.794 1.00 59.63 C
ATOM 19 O6 G A 302 4.313 147.641 45.008 1.00 62.71 O
ATOM 20 N1 G A 302 6.289 146.559 45.342 1.00 59.11 N
ATOM 21 C2 G A 302 7.221 145.919 46.122 1.00 58.18 C
ATOM 22 N2 G A 302 8.333 145.500 45.497 1.00 56.80 N
ATOM 23 N3 G A 302 7.073 145.701 47.419 1.00 57.75 N
ATOM 24 C4 G A 302 5.891 146.169 47.880 1.00 57.29 C
ATOM 25 P G A 303 6.369 149.533 53.187 1.00 51.48 P
ATOM 26 OP1 G A 303 7.162 150.039 54.335 1.00 51.20 O
ATOM 27 OP2 G A 303 4.914 149.801 53.131 1.00 52.89 O
ATOM 28 O5' G A 303 7.021 150.069 51.840 1.00 50.98 O
TER
ATOM 1 O3' G B 324 16.375 145.288 46.858 1.00 43.27 O
ATOM 2 P A B 325 17.239 144.054 47.414 1.00 42.80 P
ATOM 3 OP1 A B 325 17.637 144.421 48.785 1.00 44.84 O
ATOM 4 OP2 A B 325 18.283 143.662 46.427 1.00 42.00 O
ATOM 5 O5' A B 325 16.185 142.875 47.531 1.00 44.09 O
ATOM 6 C5' A B 325 15.969 141.959 46.450 1.00 44.89 C
ATOM 7 C4' A B 325 15.608 140.614 47.009 1.00 45.46 C
ATOM 8 O4' A B 325 14.599 140.788 48.039 1.00 45.18 O
ATOM 9 C3' A B 325 15.045 139.595 46.033 1.00 46.32 C
ATOM 10 O3' A B 325 15.437 138.324 46.524 1.00 48.52 O
ATOM 11 C2' A B 325 13.539 139.771 46.224 1.00 46.02 C
ATOM 12 O2' A B 325 12.771 138.635 45.886 1.00 48.92 O
ATOM 13 C1' A B 325 13.469 140.006 47.729 1.00 44.36 C
ATOM 14 N9 A B 325 12.284 140.710 48.206 1.00 43.76 N
ATOM 15 C8 A B 325 11.487 140.358 49.265 1.00 43.59 C
ATOM 16 N7 A B 325 10.499 141.187 49.482 1.00 42.93 N
ATOM 17 C5 A B 325 10.648 142.148 48.493 1.00 42.98 C
ATOM 18 C6 A B 325 9.914 143.298 48.177 1.00 42.55 C
ATOM 19 N6 A B 325 8.837 143.703 48.853 1.00 42.36 N
ATOM 20 N1 A B 325 10.331 144.035 47.130 1.00 44.65 N
ATOM 21 C2 A B 325 11.415 143.637 46.455 1.00 44.43 C
ATOM 22 N3 A B 325 12.187 142.578 46.655 1.00 43.24 N
ATOM 23 C4 A B 325 11.744 141.866 47.700 1.00 43.52 C
ATOM 24 P C B 326 16.625 137.516 45.819 1.00 50.69 P
ATOM 25 OP1 C B 326 17.390 136.836 46.896 1.00 51.38 O
ATOM 26 OP2 C B 326 17.340 138.399 44.871 1.00 52.58 O
ATOM 27 O5' C B 326 15.848 136.418 44.971 1.00 52.29 O
TER
Atoms:
OP1: (1.497,147.013,54.373)
OP2: (0.809,147.268,51.920)
C3': (5.967,147.213,52.048)
C1': (6.214,145.626,50.328)
C5': (4.120,145.894,53.268)
O6: (4.313,147.641,45.008)
O4': (5.313,145.110,51.294)
C8: (4.204,146.688,49.195)
C2: (7.221,145.919,46.122)
C6: (5.071,147.058,45.794)
C5: (4.890,146.811,47.184)
C4: (5.891,146.169,47.880)
P: (1.601,146.576,52.964)
C4': (5.435,145.875,52.523)
C2': (6.973,146.772,50.999)
O2': (8.151,146.253,51.572)
N1: (6.289,146.559,45.342)
N2: (8.333,145.500,45.497)
N3: (7.073,145.701,47.419)
N7: (3.829,147.124,48.024)
N9: (5.456,146.124,49.185)
O5': (3.130,146.621,52.530)
O3': (6.575,147.942,53.099)
OP2: (0.809,147.268,51.920)
C3': (5.967,147.213,52.048)
C1': (6.214,145.626,50.328)
C5': (4.120,145.894,53.268)
O6: (4.313,147.641,45.008)
O4': (5.313,145.110,51.294)
C8: (4.204,146.688,49.195)
C2: (7.221,145.919,46.122)
C6: (5.071,147.058,45.794)
C5: (4.890,146.811,47.184)
C4: (5.891,146.169,47.880)
P: (1.601,146.576,52.964)
C4': (5.435,145.875,52.523)
C2': (6.973,146.772,50.999)
O2': (8.151,146.253,51.572)
N1: (6.289,146.559,45.342)
N2: (8.333,145.500,45.497)
N3: (7.073,145.701,47.419)
N7: (3.829,147.124,48.024)
N9: (5.456,146.124,49.185)
O5': (3.130,146.621,52.530)
O3': (6.575,147.942,53.099)
OP1: (17.637,144.421,48.785)
OP2: (18.283,143.662,46.427)
C3': (15.045,139.595,46.033)
C1': (13.469,140.006,47.729)
C5': (15.969,141.959,46.450)
O4': (14.599,140.788,48.039)
C8: (11.487,140.358,49.265)
O2': (12.771,138.635,45.886)
C6: (9.914,143.298,48.177)
C5: (10.648,142.148,48.493)
C4: (11.744,141.866,47.700)
P: (17.239,144.054,47.414)
C4': (15.608,140.614,47.009)
C2': (13.539,139.771,46.224)
C2: (11.415,143.637,46.455)
N1: (10.331,144.035,47.130)
N3: (12.187,142.578,46.655)
N6: (8.837,143.703,48.853)
N7: (10.499,141.187,49.482)
N9: (12.284,140.710,48.206)
O5': (16.185,142.875,47.531)
O3': (15.437,138.324,46.524)
OP2: (18.283,143.662,46.427)
C3': (15.045,139.595,46.033)
C1': (13.469,140.006,47.729)
C5': (15.969,141.959,46.450)
O4': (14.599,140.788,48.039)
C8: (11.487,140.358,49.265)
O2': (12.771,138.635,45.886)
C6: (9.914,143.298,48.177)
C5: (10.648,142.148,48.493)
C4: (11.744,141.866,47.700)
P: (17.239,144.054,47.414)
C4': (15.608,140.614,47.009)
C2': (13.539,139.771,46.224)
C2: (11.415,143.637,46.455)
N1: (10.331,144.035,47.130)
N3: (12.187,142.578,46.655)
N6: (8.837,143.703,48.853)
N7: (10.499,141.187,49.482)
N9: (12.284,140.710,48.206)
O5': (16.185,142.875,47.531)
O3': (15.437,138.324,46.524)
Image (generated by PyMOL):