ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:0440:0448

Extra

PDB:
ATOM 1 O3' C A 439 36.472 126.173 55.472 1.00 28.48 O
ATOM 2 P G A 440 35.038 126.659 55.993 1.00 29.42 P
ATOM 3 OP1 G A 440 35.011 126.514 57.468 1.00 29.92 O
ATOM 4 OP2 G A 440 34.037 125.950 55.163 1.00 30.41 O
ATOM 5 O5' G A 440 35.004 128.211 55.647 1.00 30.32 O
ATOM 6 C5' G A 440 36.016 129.092 56.163 1.00 31.98 C
ATOM 7 C4' G A 440 35.798 130.494 55.662 1.00 32.64 C
ATOM 8 O4' G A 440 35.954 130.503 54.217 1.00 34.70 O
ATOM 9 C3' G A 440 34.425 131.089 55.950 1.00 32.29 C
ATOM 10 O3' G A 440 34.547 132.484 56.140 1.00 32.25 O
ATOM 11 C2' G A 440 33.672 130.843 54.650 1.00 34.07 C
ATOM 12 O2' G A 440 32.645 131.787 54.433 1.00 34.93 O
ATOM 13 C1' G A 440 34.781 131.012 53.613 1.00 34.63 C
ATOM 14 N9 G A 440 34.526 130.254 52.391 1.00 35.57 N
ATOM 15 C8 G A 440 34.237 128.912 52.297 1.00 37.18 C
ATOM 16 N7 G A 440 34.001 128.522 51.074 1.00 37.19 N
ATOM 17 C5 G A 440 34.154 129.671 50.312 1.00 36.12 C
ATOM 18 C6 G A 440 34.007 129.869 48.921 1.00 35.32 C
ATOM 19 O6 G A 440 33.664 129.055 48.068 1.00 34.22 O
ATOM 20 N1 G A 440 34.286 131.181 48.557 1.00 36.59 N
ATOM 21 C2 G A 440 34.635 132.182 49.428 1.00 36.03 C
ATOM 22 N2 G A 440 34.876 133.375 48.883 1.00 36.74 N
ATOM 23 N3 G A 440 34.744 132.021 50.737 1.00 35.93 N
ATOM 24 C4 G A 440 34.497 130.746 51.107 1.00 35.82 C
ATOM 25 P A A 441 34.366 133.113 57.602 1.00 32.58 P
ATOM 26 OP1 A A 441 34.381 132.031 58.610 1.00 33.68 O
ATOM 27 OP2 A A 441 33.212 134.035 57.543 1.00 34.65 O
ATOM 28 O5' A A 441 35.680 133.992 57.779 1.00 30.84 O
TER

ATOM 1 O3' A B 447 45.747 138.803 53.189 1.00 33.47 O
ATOM 2 P A B 448 44.300 138.123 53.065 1.00 33.70 P
ATOM 3 OP1 A B 448 43.631 138.238 54.379 1.00 32.53 O
ATOM 4 OP2 A B 448 44.424 136.793 52.417 1.00 34.13 O
ATOM 5 O5' A B 448 43.537 139.089 52.064 1.00 33.61 O
ATOM 6 C5' A B 448 43.957 139.203 50.699 1.00 33.18 C
ATOM 7 C4' A B 448 42.801 139.634 49.837 1.00 33.96 C
ATOM 8 O4' A B 448 41.815 138.571 49.762 1.00 34.84 O
ATOM 9 C3' A B 448 42.048 140.870 50.305 1.00 33.84 C
ATOM 10 O3' A B 448 41.599 141.552 49.149 1.00 34.49 O
ATOM 11 C2' A B 448 40.867 140.276 51.064 1.00 33.85 C
ATOM 12 O2' A B 448 39.739 141.119 51.089 1.00 33.52 O
ATOM 13 C1' A B 448 40.563 139.048 50.218 1.00 35.37 C
ATOM 14 N9 A B 448 39.912 137.962 50.943 1.00 38.00 N
ATOM 15 C8 A B 448 40.262 137.420 52.154 1.00 38.58 C
ATOM 16 N7 A B 448 39.521 136.404 52.509 1.00 40.24 N
ATOM 17 C5 A B 448 38.613 136.272 51.467 1.00 40.74 C
ATOM 18 C6 A B 448 37.571 135.360 51.230 1.00 40.55 C
ATOM 19 N6 A B 448 37.265 134.362 52.055 1.00 41.39 N
ATOM 20 N1 A B 448 36.853 135.506 50.098 1.00 40.28 N
ATOM 21 C2 A B 448 37.171 136.501 49.264 1.00 41.49 C
ATOM 22 N3 A B 448 38.133 137.416 49.371 1.00 41.60 N
ATOM 23 C4 A B 448 38.829 137.241 50.508 1.00 40.51 C
ATOM 24 P C B 449 42.455 142.776 48.576 1.00 35.06 P
ATOM 25 OP1 C B 449 41.687 143.350 47.435 1.00 34.16 O
ATOM 26 OP2 C B 449 43.847 142.308 48.365 1.00 32.93 O
ATOM 27 O5' C B 449 42.406 143.817 49.770 1.00 31.14 O
TER

Atoms:
OP1: (35.011,126.514,57.468)
OP2: (34.037,125.950,55.163)
C3': (34.425,131.089,55.950)
C1': (34.781,131.012,53.613)
C5': (36.016,129.092,56.163)
O6: (33.664,129.055,48.068)
O4': (35.954,130.503,54.217)
C8: (34.237,128.912,52.297)
C2: (34.635,132.182,49.428)
C6: (34.007,129.869,48.921)
C5: (34.154,129.671,50.312)
C4: (34.497,130.746,51.107)
P: (35.038,126.659,55.993)
C4': (35.798,130.494,55.662)
C2': (33.672,130.843,54.650)
O2': (32.645,131.787,54.433)
N1: (34.286,131.181,48.557)
N2: (34.876,133.375,48.883)
N3: (34.744,132.021,50.737)
N7: (34.001,128.522,51.074)
N9: (34.526,130.254,52.391)
O5': (35.004,128.211,55.647)
O3': (34.547,132.484,56.140)
OP1: (43.631,138.238,54.379)
OP2: (44.424,136.793,52.417)
C3': (42.048,140.870,50.305)
C1': (40.563,139.048,50.218)
C5': (43.957,139.203,50.699)
O4': (41.815,138.571,49.762)
C8: (40.262,137.420,52.154)
O2': (39.739,141.119,51.089)
C6: (37.571,135.360,51.230)
C5: (38.613,136.272,51.467)
C4: (38.829,137.241,50.508)
P: (44.300,138.123,53.065)
C4': (42.801,139.634,49.837)
C2': (40.867,140.276,51.064)
C2: (37.171,136.501,49.264)
N1: (36.853,135.506,50.098)
N3: (38.133,137.416,49.371)
N6: (37.265,134.362,52.055)
N7: (39.521,136.404,52.509)
N9: (39.912,137.962,50.943)
O5': (43.537,139.089,52.064)
O3': (41.599,141.552,49.149)
Image (generated by PyMOL):
PyMOL image
show in jmol