Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0302:0325
Extra
PDB:
ATOM 1 O3' U A 301 0.972 145.007 52.913 1.00 52.92 O
ATOM 2 P G A 302 1.359 146.562 52.908 1.00 51.33 P
ATOM 3 OP1 G A 302 1.261 147.069 54.299 1.00 51.03 O
ATOM 4 OP2 G A 302 0.597 147.233 51.829 1.00 51.42 O
ATOM 5 O5' G A 302 2.890 146.554 52.490 1.00 51.83 O
ATOM 6 C5' G A 302 3.849 145.822 53.260 1.00 51.30 C
ATOM 7 C4' G A 302 5.182 145.804 52.558 1.00 50.45 C
ATOM 8 O4' G A 302 5.082 145.043 51.328 1.00 51.67 O
ATOM 9 C3' G A 302 5.713 147.149 52.102 1.00 49.03 C
ATOM 10 O3' G A 302 6.323 147.859 53.166 1.00 49.03 O
ATOM 11 C2' G A 302 6.725 146.730 51.053 1.00 49.75 C
ATOM 12 O2' G A 302 7.908 146.236 51.641 1.00 49.04 O
ATOM 13 C1' G A 302 5.984 145.576 50.375 1.00 51.34 C
ATOM 14 N9 G A 302 5.221 146.038 49.220 1.00 53.28 N
ATOM 15 C8 G A 302 3.952 146.563 49.211 1.00 53.91 C
ATOM 16 N7 G A 302 3.561 146.934 48.023 1.00 55.00 N
ATOM 17 C5 G A 302 4.630 146.623 47.196 1.00 55.18 C
ATOM 18 C6 G A 302 4.793 146.795 45.800 1.00 55.94 C
ATOM 19 O6 G A 302 3.995 147.270 44.982 1.00 57.86 O
ATOM 20 N1 G A 302 6.037 146.346 45.374 1.00 55.94 N
ATOM 21 C2 G A 302 7.001 145.798 46.183 1.00 55.31 C
ATOM 22 N2 G A 302 8.142 145.434 45.585 1.00 55.11 N
ATOM 23 N3 G A 302 6.858 145.622 47.482 1.00 54.64 N
ATOM 24 C4 G A 302 5.658 146.058 47.919 1.00 54.42 C
ATOM 25 P G A 303 6.196 149.456 53.232 1.00 47.82 P
ATOM 26 OP1 G A 303 7.112 149.942 54.287 1.00 48.15 O
ATOM 27 OP2 G A 303 4.753 149.799 53.302 1.00 48.36 O
ATOM 28 O5' G A 303 6.768 149.929 51.825 1.00 47.42 O
TER
ATOM 1 O3' G B 324 16.130 145.220 46.844 1.00 41.55 O
ATOM 2 P A B 325 17.019 144.010 47.420 1.00 40.25 P
ATOM 3 OP1 A B 325 17.446 144.384 48.791 1.00 39.38 O
ATOM 4 OP2 A B 325 18.044 143.628 46.412 1.00 38.43 O
ATOM 5 O5' A B 325 15.981 142.816 47.562 1.00 41.74 O
ATOM 6 C5' A B 325 15.696 141.939 46.461 1.00 41.75 C
ATOM 7 C4' A B 325 15.377 140.565 46.984 1.00 42.25 C
ATOM 8 O4' A B 325 14.360 140.674 48.014 1.00 43.08 O
ATOM 9 C3' A B 325 14.836 139.575 45.966 1.00 43.69 C
ATOM 10 O3' A B 325 15.212 138.272 46.406 1.00 44.81 O
ATOM 11 C2' A B 325 13.330 139.756 46.130 1.00 44.60 C
ATOM 12 O2' A B 325 12.557 138.661 45.685 1.00 47.31 O
ATOM 13 C1' A B 325 13.232 139.914 47.645 1.00 43.29 C
ATOM 14 N9 A B 325 12.036 140.593 48.136 1.00 42.85 N
ATOM 15 C8 A B 325 11.248 140.198 49.185 1.00 42.99 C
ATOM 16 N7 A B 325 10.228 140.986 49.406 1.00 42.52 N
ATOM 17 C5 A B 325 10.350 141.969 48.437 1.00 42.56 C
ATOM 18 C6 A B 325 9.572 143.093 48.133 1.00 42.44 C
ATOM 19 N6 A B 325 8.463 143.432 48.794 1.00 41.92 N
ATOM 20 N1 A B 325 9.973 143.872 47.109 1.00 44.24 N
ATOM 21 C2 A B 325 11.082 143.531 46.440 1.00 44.42 C
ATOM 22 N3 A B 325 11.893 142.496 46.628 1.00 43.10 N
ATOM 23 C4 A B 325 11.465 141.744 47.652 1.00 42.66 C
ATOM 24 P C B 326 16.454 137.514 45.728 1.00 43.87 P
ATOM 25 OP1 C B 326 17.136 136.725 46.777 1.00 44.11 O
ATOM 26 OP2 C B 326 17.241 138.468 44.909 1.00 44.91 O
ATOM 27 O5' C B 326 15.763 136.485 44.739 1.00 44.19 O
TER
ATOM 2 P G A 302 1.359 146.562 52.908 1.00 51.33 P
ATOM 3 OP1 G A 302 1.261 147.069 54.299 1.00 51.03 O
ATOM 4 OP2 G A 302 0.597 147.233 51.829 1.00 51.42 O
ATOM 5 O5' G A 302 2.890 146.554 52.490 1.00 51.83 O
ATOM 6 C5' G A 302 3.849 145.822 53.260 1.00 51.30 C
ATOM 7 C4' G A 302 5.182 145.804 52.558 1.00 50.45 C
ATOM 8 O4' G A 302 5.082 145.043 51.328 1.00 51.67 O
ATOM 9 C3' G A 302 5.713 147.149 52.102 1.00 49.03 C
ATOM 10 O3' G A 302 6.323 147.859 53.166 1.00 49.03 O
ATOM 11 C2' G A 302 6.725 146.730 51.053 1.00 49.75 C
ATOM 12 O2' G A 302 7.908 146.236 51.641 1.00 49.04 O
ATOM 13 C1' G A 302 5.984 145.576 50.375 1.00 51.34 C
ATOM 14 N9 G A 302 5.221 146.038 49.220 1.00 53.28 N
ATOM 15 C8 G A 302 3.952 146.563 49.211 1.00 53.91 C
ATOM 16 N7 G A 302 3.561 146.934 48.023 1.00 55.00 N
ATOM 17 C5 G A 302 4.630 146.623 47.196 1.00 55.18 C
ATOM 18 C6 G A 302 4.793 146.795 45.800 1.00 55.94 C
ATOM 19 O6 G A 302 3.995 147.270 44.982 1.00 57.86 O
ATOM 20 N1 G A 302 6.037 146.346 45.374 1.00 55.94 N
ATOM 21 C2 G A 302 7.001 145.798 46.183 1.00 55.31 C
ATOM 22 N2 G A 302 8.142 145.434 45.585 1.00 55.11 N
ATOM 23 N3 G A 302 6.858 145.622 47.482 1.00 54.64 N
ATOM 24 C4 G A 302 5.658 146.058 47.919 1.00 54.42 C
ATOM 25 P G A 303 6.196 149.456 53.232 1.00 47.82 P
ATOM 26 OP1 G A 303 7.112 149.942 54.287 1.00 48.15 O
ATOM 27 OP2 G A 303 4.753 149.799 53.302 1.00 48.36 O
ATOM 28 O5' G A 303 6.768 149.929 51.825 1.00 47.42 O
TER
ATOM 1 O3' G B 324 16.130 145.220 46.844 1.00 41.55 O
ATOM 2 P A B 325 17.019 144.010 47.420 1.00 40.25 P
ATOM 3 OP1 A B 325 17.446 144.384 48.791 1.00 39.38 O
ATOM 4 OP2 A B 325 18.044 143.628 46.412 1.00 38.43 O
ATOM 5 O5' A B 325 15.981 142.816 47.562 1.00 41.74 O
ATOM 6 C5' A B 325 15.696 141.939 46.461 1.00 41.75 C
ATOM 7 C4' A B 325 15.377 140.565 46.984 1.00 42.25 C
ATOM 8 O4' A B 325 14.360 140.674 48.014 1.00 43.08 O
ATOM 9 C3' A B 325 14.836 139.575 45.966 1.00 43.69 C
ATOM 10 O3' A B 325 15.212 138.272 46.406 1.00 44.81 O
ATOM 11 C2' A B 325 13.330 139.756 46.130 1.00 44.60 C
ATOM 12 O2' A B 325 12.557 138.661 45.685 1.00 47.31 O
ATOM 13 C1' A B 325 13.232 139.914 47.645 1.00 43.29 C
ATOM 14 N9 A B 325 12.036 140.593 48.136 1.00 42.85 N
ATOM 15 C8 A B 325 11.248 140.198 49.185 1.00 42.99 C
ATOM 16 N7 A B 325 10.228 140.986 49.406 1.00 42.52 N
ATOM 17 C5 A B 325 10.350 141.969 48.437 1.00 42.56 C
ATOM 18 C6 A B 325 9.572 143.093 48.133 1.00 42.44 C
ATOM 19 N6 A B 325 8.463 143.432 48.794 1.00 41.92 N
ATOM 20 N1 A B 325 9.973 143.872 47.109 1.00 44.24 N
ATOM 21 C2 A B 325 11.082 143.531 46.440 1.00 44.42 C
ATOM 22 N3 A B 325 11.893 142.496 46.628 1.00 43.10 N
ATOM 23 C4 A B 325 11.465 141.744 47.652 1.00 42.66 C
ATOM 24 P C B 326 16.454 137.514 45.728 1.00 43.87 P
ATOM 25 OP1 C B 326 17.136 136.725 46.777 1.00 44.11 O
ATOM 26 OP2 C B 326 17.241 138.468 44.909 1.00 44.91 O
ATOM 27 O5' C B 326 15.763 136.485 44.739 1.00 44.19 O
TER
Atoms:
OP1: (1.261,147.069,54.299)
OP2: (0.597,147.233,51.829)
C3': (5.713,147.149,52.102)
C1': (5.984,145.576,50.375)
C5': (3.849,145.822,53.260)
O6: (3.995,147.270,44.982)
O4': (5.082,145.043,51.328)
C8: (3.952,146.563,49.211)
C2: (7.001,145.798,46.183)
C6: (4.793,146.795,45.800)
C5: (4.630,146.623,47.196)
C4: (5.658,146.058,47.919)
P: (1.359,146.562,52.908)
C4': (5.182,145.804,52.558)
C2': (6.725,146.730,51.053)
O2': (7.908,146.236,51.641)
N1: (6.037,146.346,45.374)
N2: (8.142,145.434,45.585)
N3: (6.858,145.622,47.482)
N7: (3.561,146.934,48.023)
N9: (5.221,146.038,49.220)
O5': (2.890,146.554,52.490)
O3': (6.323,147.859,53.166)
OP2: (0.597,147.233,51.829)
C3': (5.713,147.149,52.102)
C1': (5.984,145.576,50.375)
C5': (3.849,145.822,53.260)
O6: (3.995,147.270,44.982)
O4': (5.082,145.043,51.328)
C8: (3.952,146.563,49.211)
C2: (7.001,145.798,46.183)
C6: (4.793,146.795,45.800)
C5: (4.630,146.623,47.196)
C4: (5.658,146.058,47.919)
P: (1.359,146.562,52.908)
C4': (5.182,145.804,52.558)
C2': (6.725,146.730,51.053)
O2': (7.908,146.236,51.641)
N1: (6.037,146.346,45.374)
N2: (8.142,145.434,45.585)
N3: (6.858,145.622,47.482)
N7: (3.561,146.934,48.023)
N9: (5.221,146.038,49.220)
O5': (2.890,146.554,52.490)
O3': (6.323,147.859,53.166)
OP1: (17.446,144.384,48.791)
OP2: (18.044,143.628,46.412)
C3': (14.836,139.575,45.966)
C1': (13.232,139.914,47.645)
C5': (15.696,141.939,46.461)
O4': (14.360,140.674,48.014)
C8: (11.248,140.198,49.185)
O2': (12.557,138.661,45.685)
C6: (9.572,143.093,48.133)
C5: (10.350,141.969,48.437)
C4: (11.465,141.744,47.652)
P: (17.019,144.010,47.420)
C4': (15.377,140.565,46.984)
C2': (13.330,139.756,46.130)
C2: (11.082,143.531,46.440)
N1: (9.973,143.872,47.109)
N3: (11.893,142.496,46.628)
N6: (8.463,143.432,48.794)
N7: (10.228,140.986,49.406)
N9: (12.036,140.593,48.136)
O5': (15.981,142.816,47.562)
O3': (15.212,138.272,46.406)
OP2: (18.044,143.628,46.412)
C3': (14.836,139.575,45.966)
C1': (13.232,139.914,47.645)
C5': (15.696,141.939,46.461)
O4': (14.360,140.674,48.014)
C8: (11.248,140.198,49.185)
O2': (12.557,138.661,45.685)
C6: (9.572,143.093,48.133)
C5: (10.350,141.969,48.437)
C4: (11.465,141.744,47.652)
P: (17.019,144.010,47.420)
C4': (15.377,140.565,46.984)
C2': (13.330,139.756,46.130)
C2: (11.082,143.531,46.440)
N1: (9.973,143.872,47.109)
N3: (11.893,142.496,46.628)
N6: (8.463,143.432,48.794)
N7: (10.228,140.986,49.406)
N9: (12.036,140.593,48.136)
O5': (15.981,142.816,47.562)
O3': (15.212,138.272,46.406)
Image (generated by PyMOL):