Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A306:A329
Extra
PDB:
ATOM 1 O3' U A 305 -41.049-123.179 39.938 1.00 6.43 O
ATOM 2 P G A 306 -39.543-123.274 39.396 1.00 0.30 P
ATOM 3 OP1 G A 306 -39.593-123.928 38.059 1.00 0.30 O
ATOM 4 OP2 G A 306 -38.712-123.892 40.480 1.00 0.30 O
ATOM 5 O5' G A 306 -39.186-121.751 39.228 1.00 0.30 O
ATOM 6 C5' G A 306 -40.213-120.819 38.986 1.00 0.30 C
ATOM 7 C4' G A 306 -39.911-119.530 39.647 1.00 0.30 C
ATOM 8 O4' G A 306 -40.124-119.660 41.073 1.00 0.30 O
ATOM 9 C3' G A 306 -38.470-119.085 39.540 1.00 0.30 C
ATOM 10 O3' G A 306 -38.148-118.536 38.266 1.00 0.30 O
ATOM 11 C2' G A 306 -38.348-118.117 40.711 1.00 0.30 C
ATOM 12 O2' G A 306 -38.923-116.868 40.385 1.00 0.30 O
ATOM 13 C1' G A 306 -39.235-118.805 41.757 1.00 0.30 C
ATOM 14 N9 G A 306 -38.458-119.609 42.706 1.00 0.30 N
ATOM 15 C8 G A 306 -38.082-120.916 42.645 1.00 0.30 C
ATOM 16 N7 G A 306 -37.409-121.312 43.695 1.00 0.30 N
ATOM 17 C5 G A 306 -37.368-120.196 44.481 1.00 0.30 C
ATOM 18 C6 G A 306 -36.764-119.975 45.726 1.00 0.30 C
ATOM 19 O6 G A 306 -36.133-120.762 46.428 1.00 0.30 O
ATOM 20 N1 G A 306 -36.964-118.686 46.187 1.00 0.30 N
ATOM 21 C2 G A 306 -37.645-117.722 45.516 1.00 0.30 C
ATOM 22 N2 G A 306 -37.717-116.544 46.125 1.00 0.30 N
ATOM 23 N3 G A 306 -38.197-117.898 44.345 1.00 0.30 N
ATOM 24 C4 G A 306 -38.016-119.149 43.898 1.00 0.30 C
ATOM 25 P G A 307 -36.705-118.819 37.598 1.00 0.01 P
ATOM 26 OP1 G A 307 -36.807-118.432 36.182 1.00 0.01 O
ATOM 27 OP2 G A 307 -36.327-120.194 37.924 1.00 0.01 O
ATOM 28 O5' G A 307 -35.770-117.799 38.371 1.00 0.01 O
TER
ATOM 1 O3' G B 328 -38.284-108.526 44.680 1.00 0.01 O
ATOM 2 P A B 329 -39.408-107.453 44.335 1.00 0.01 P
ATOM 3 OP1 A B 329 -39.229-107.068 42.927 1.00 0.01 O
ATOM 4 OP2 A B 329 -39.348-106.418 45.358 1.00 0.01 O
ATOM 5 O5' A B 329 -40.730-108.295 44.491 1.00 0.01 O
ATOM 6 C5' A B 329 -41.384-108.440 45.745 1.00 0.01 C
ATOM 7 C4' A B 329 -42.816-108.855 45.542 1.00 0.01 C
ATOM 8 O4' A B 329 -42.860-109.942 44.577 1.00 0.01 O
ATOM 9 C3' A B 329 -43.550-109.365 46.770 1.00 0.01 C
ATOM 10 O3' A B 329 -44.915-108.962 46.689 1.00 0.01 O
ATOM 11 C2' A B 329 -43.467-110.873 46.594 1.00 0.01 C
ATOM 12 O2' A B 329 -44.460-111.591 47.245 1.00 0.01 O
ATOM 13 C1' A B 329 -43.622-110.993 45.110 1.00 0.01 C
ATOM 14 N9 A B 329 -43.138-112.239 44.558 1.00 0.01 N
ATOM 15 C8 A B 329 -43.766-112.932 43.591 1.00 0.01 C
ATOM 16 N7 A B 329 -43.136-114.008 43.262 1.00 0.01 N
ATOM 17 C5 A B 329 -42.013-114.007 44.054 1.00 0.01 C
ATOM 18 C6 A B 329 -40.948-114.890 44.151 1.00 0.01 C
ATOM 19 N6 A B 329 -40.824-115.980 43.409 1.00 0.01 N
ATOM 20 N1 A B 329 -39.996-114.609 45.032 1.00 0.01 N
ATOM 21 C2 A B 329 -40.112-113.513 45.773 1.00 0.01 C
ATOM 22 N3 A B 329 -41.064-112.604 45.779 1.00 0.01 N
ATOM 23 C4 A B 329 -41.999-112.914 44.871 1.00 0.01 C
ATOM 24 P C B 330 -45.342-107.445 47.030 1.00 3.20 P
ATOM 25 OP1 C B 330 -46.036-106.891 45.836 1.00 3.20 O
ATOM 26 OP2 C B 330 -44.133-106.745 47.550 1.00 3.20 O
ATOM 27 O5' C B 330 -46.366-107.636 48.197 1.00 3.20 O
TER
ATOM 2 P G A 306 -39.543-123.274 39.396 1.00 0.30 P
ATOM 3 OP1 G A 306 -39.593-123.928 38.059 1.00 0.30 O
ATOM 4 OP2 G A 306 -38.712-123.892 40.480 1.00 0.30 O
ATOM 5 O5' G A 306 -39.186-121.751 39.228 1.00 0.30 O
ATOM 6 C5' G A 306 -40.213-120.819 38.986 1.00 0.30 C
ATOM 7 C4' G A 306 -39.911-119.530 39.647 1.00 0.30 C
ATOM 8 O4' G A 306 -40.124-119.660 41.073 1.00 0.30 O
ATOM 9 C3' G A 306 -38.470-119.085 39.540 1.00 0.30 C
ATOM 10 O3' G A 306 -38.148-118.536 38.266 1.00 0.30 O
ATOM 11 C2' G A 306 -38.348-118.117 40.711 1.00 0.30 C
ATOM 12 O2' G A 306 -38.923-116.868 40.385 1.00 0.30 O
ATOM 13 C1' G A 306 -39.235-118.805 41.757 1.00 0.30 C
ATOM 14 N9 G A 306 -38.458-119.609 42.706 1.00 0.30 N
ATOM 15 C8 G A 306 -38.082-120.916 42.645 1.00 0.30 C
ATOM 16 N7 G A 306 -37.409-121.312 43.695 1.00 0.30 N
ATOM 17 C5 G A 306 -37.368-120.196 44.481 1.00 0.30 C
ATOM 18 C6 G A 306 -36.764-119.975 45.726 1.00 0.30 C
ATOM 19 O6 G A 306 -36.133-120.762 46.428 1.00 0.30 O
ATOM 20 N1 G A 306 -36.964-118.686 46.187 1.00 0.30 N
ATOM 21 C2 G A 306 -37.645-117.722 45.516 1.00 0.30 C
ATOM 22 N2 G A 306 -37.717-116.544 46.125 1.00 0.30 N
ATOM 23 N3 G A 306 -38.197-117.898 44.345 1.00 0.30 N
ATOM 24 C4 G A 306 -38.016-119.149 43.898 1.00 0.30 C
ATOM 25 P G A 307 -36.705-118.819 37.598 1.00 0.01 P
ATOM 26 OP1 G A 307 -36.807-118.432 36.182 1.00 0.01 O
ATOM 27 OP2 G A 307 -36.327-120.194 37.924 1.00 0.01 O
ATOM 28 O5' G A 307 -35.770-117.799 38.371 1.00 0.01 O
TER
ATOM 1 O3' G B 328 -38.284-108.526 44.680 1.00 0.01 O
ATOM 2 P A B 329 -39.408-107.453 44.335 1.00 0.01 P
ATOM 3 OP1 A B 329 -39.229-107.068 42.927 1.00 0.01 O
ATOM 4 OP2 A B 329 -39.348-106.418 45.358 1.00 0.01 O
ATOM 5 O5' A B 329 -40.730-108.295 44.491 1.00 0.01 O
ATOM 6 C5' A B 329 -41.384-108.440 45.745 1.00 0.01 C
ATOM 7 C4' A B 329 -42.816-108.855 45.542 1.00 0.01 C
ATOM 8 O4' A B 329 -42.860-109.942 44.577 1.00 0.01 O
ATOM 9 C3' A B 329 -43.550-109.365 46.770 1.00 0.01 C
ATOM 10 O3' A B 329 -44.915-108.962 46.689 1.00 0.01 O
ATOM 11 C2' A B 329 -43.467-110.873 46.594 1.00 0.01 C
ATOM 12 O2' A B 329 -44.460-111.591 47.245 1.00 0.01 O
ATOM 13 C1' A B 329 -43.622-110.993 45.110 1.00 0.01 C
ATOM 14 N9 A B 329 -43.138-112.239 44.558 1.00 0.01 N
ATOM 15 C8 A B 329 -43.766-112.932 43.591 1.00 0.01 C
ATOM 16 N7 A B 329 -43.136-114.008 43.262 1.00 0.01 N
ATOM 17 C5 A B 329 -42.013-114.007 44.054 1.00 0.01 C
ATOM 18 C6 A B 329 -40.948-114.890 44.151 1.00 0.01 C
ATOM 19 N6 A B 329 -40.824-115.980 43.409 1.00 0.01 N
ATOM 20 N1 A B 329 -39.996-114.609 45.032 1.00 0.01 N
ATOM 21 C2 A B 329 -40.112-113.513 45.773 1.00 0.01 C
ATOM 22 N3 A B 329 -41.064-112.604 45.779 1.00 0.01 N
ATOM 23 C4 A B 329 -41.999-112.914 44.871 1.00 0.01 C
ATOM 24 P C B 330 -45.342-107.445 47.030 1.00 3.20 P
ATOM 25 OP1 C B 330 -46.036-106.891 45.836 1.00 3.20 O
ATOM 26 OP2 C B 330 -44.133-106.745 47.550 1.00 3.20 O
ATOM 27 O5' C B 330 -46.366-107.636 48.197 1.00 3.20 O
TER
Atoms:
OP1: (-39.593,-123.928,38.059)
OP2: (-38.712,-123.892,40.480)
C3': (-38.470,-119.085,39.540)
C1': (-39.235,-118.805,41.757)
C5': (-40.213,-120.819,38.986)
O6: (-36.133,-120.762,46.428)
O4': (-40.124,-119.660,41.073)
C8: (-38.082,-120.916,42.645)
C2: (-37.645,-117.722,45.516)
C6: (-36.764,-119.975,45.726)
C5: (-37.368,-120.196,44.481)
C4: (-38.016,-119.149,43.898)
P: (-39.543,-123.274,39.396)
C4': (-39.911,-119.530,39.647)
C2': (-38.348,-118.117,40.711)
O2': (-38.923,-116.868,40.385)
N1: (-36.964,-118.686,46.187)
N2: (-37.717,-116.544,46.125)
N3: (-38.197,-117.898,44.345)
N7: (-37.409,-121.312,43.695)
N9: (-38.458,-119.609,42.706)
O5': (-39.186,-121.751,39.228)
O3': (-38.148,-118.536,38.266)
OP2: (-38.712,-123.892,40.480)
C3': (-38.470,-119.085,39.540)
C1': (-39.235,-118.805,41.757)
C5': (-40.213,-120.819,38.986)
O6: (-36.133,-120.762,46.428)
O4': (-40.124,-119.660,41.073)
C8: (-38.082,-120.916,42.645)
C2: (-37.645,-117.722,45.516)
C6: (-36.764,-119.975,45.726)
C5: (-37.368,-120.196,44.481)
C4: (-38.016,-119.149,43.898)
P: (-39.543,-123.274,39.396)
C4': (-39.911,-119.530,39.647)
C2': (-38.348,-118.117,40.711)
O2': (-38.923,-116.868,40.385)
N1: (-36.964,-118.686,46.187)
N2: (-37.717,-116.544,46.125)
N3: (-38.197,-117.898,44.345)
N7: (-37.409,-121.312,43.695)
N9: (-38.458,-119.609,42.706)
O5': (-39.186,-121.751,39.228)
O3': (-38.148,-118.536,38.266)
OP1: (-39.229,-107.068,42.927)
OP2: (-39.348,-106.418,45.358)
C3': (-43.550,-109.365,46.770)
C1': (-43.622,-110.993,45.110)
C5': (-41.384,-108.440,45.745)
O4': (-42.860,-109.942,44.577)
C8: (-43.766,-112.932,43.591)
O2': (-44.460,-111.591,47.245)
C6: (-40.948,-114.890,44.151)
C5: (-42.013,-114.007,44.054)
C4: (-41.999,-112.914,44.871)
P: (-39.408,-107.453,44.335)
C4': (-42.816,-108.855,45.542)
C2': (-43.467,-110.873,46.594)
C2: (-40.112,-113.513,45.773)
N1: (-39.996,-114.609,45.032)
N3: (-41.064,-112.604,45.779)
N6: (-40.824,-115.980,43.409)
N7: (-43.136,-114.008,43.262)
N9: (-43.138,-112.239,44.558)
O5': (-40.730,-108.295,44.491)
O3': (-44.915,-108.962,46.689)
OP2: (-39.348,-106.418,45.358)
C3': (-43.550,-109.365,46.770)
C1': (-43.622,-110.993,45.110)
C5': (-41.384,-108.440,45.745)
O4': (-42.860,-109.942,44.577)
C8: (-43.766,-112.932,43.591)
O2': (-44.460,-111.591,47.245)
C6: (-40.948,-114.890,44.151)
C5: (-42.013,-114.007,44.054)
C4: (-41.999,-112.914,44.871)
P: (-39.408,-107.453,44.335)
C4': (-42.816,-108.855,45.542)
C2': (-43.467,-110.873,46.594)
C2: (-40.112,-113.513,45.773)
N1: (-39.996,-114.609,45.032)
N3: (-41.064,-112.604,45.779)
N6: (-40.824,-115.980,43.409)
N7: (-43.136,-114.008,43.262)
N9: (-43.138,-112.239,44.558)
O5': (-40.730,-108.295,44.491)
O3': (-44.915,-108.962,46.689)
Image (generated by PyMOL):