Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12570:12214
Extra
PDB:
ATOM 1 O3' A A2569 34.836 -13.314 58.898 1.00 35.58 O
ATOM 2 P U A2570 34.118 -12.670 57.597 1.00 39.78 P
ATOM 3 OP1 U A2570 34.703 -13.376 56.429 1.00 39.84 O
ATOM 4 OP2 U A2570 34.220 -11.187 57.670 1.00 39.74 O
ATOM 5 O5' U A2570 32.589 -13.052 57.742 1.00 39.85 O
ATOM 6 C5' U A2570 31.923 -12.871 58.959 1.00 39.81 C
ATOM 7 C4' U A2570 30.867 -11.790 58.956 1.00 39.85 C
ATOM 8 O4' U A2570 30.393 -11.759 60.299 1.00 39.81 O
ATOM 9 C3' U A2570 31.371 -10.369 58.746 1.00 39.81 C
ATOM 10 O3' U A2570 30.244 -9.431 58.715 1.00 39.88 O
ATOM 11 C2' U A2570 32.129 -10.178 60.060 1.00 39.71 C
ATOM 12 O2' U A2570 32.415 -8.838 60.390 1.00 39.68 O
ATOM 13 C1' U A2570 31.159 -10.819 61.049 1.00 39.73 C
ATOM 14 N1 U A2570 31.825 -11.547 62.146 1.00 39.67 N
ATOM 15 C2 U A2570 31.644 -11.064 63.399 1.00 39.64 C
ATOM 16 O2 U A2570 30.995 -10.104 63.612 1.00 39.66 O
ATOM 17 N3 U A2570 32.314 -11.704 64.390 1.00 39.59 N
ATOM 18 C4 U A2570 33.159 -12.809 64.249 1.00 39.58 C
ATOM 19 O4 U A2570 33.689 -13.315 65.266 1.00 39.56 O
ATOM 20 C5 U A2570 33.298 -13.282 62.895 1.00 39.61 C
ATOM 21 C6 U A2570 32.641 -12.640 61.943 1.00 39.65 C
ATOM 22 P A A2571 29.909 -8.468 57.430 1.00 45.42 P
ATOM 23 OP1 A A2571 29.992 -9.310 56.219 1.00 45.49 O
ATOM 24 OP2 A A2571 30.771 -7.270 57.498 1.00 45.37 O
ATOM 25 O5' A A2571 28.360 -8.047 57.719 1.00 45.51 O
TER
ATOM 1 O3' C B2213 24.548 -9.637 67.154 1.00 40.23 O
ATOM 2 P C B2214 24.776 -10.741 68.290 1.00 35.69 P
ATOM 3 OP1 C B2214 23.608 -11.624 68.274 1.00 35.79 O
ATOM 4 OP2 C B2214 25.104 -10.008 69.564 1.00 35.67 O
ATOM 5 O5' C B2214 26.059 -11.543 67.747 1.00 35.60 O
ATOM 6 C5' C B2214 26.017 -12.274 66.531 1.00 35.61 C
ATOM 7 C4' C B2214 27.398 -12.498 66.002 1.00 35.52 C
ATOM 8 O4' C B2214 28.111 -11.240 65.974 1.00 35.46 O
ATOM 9 C3' C B2214 28.287 -13.388 66.843 1.00 35.48 C
ATOM 10 O3' C B2214 28.105 -14.744 66.576 1.00 35.53 O
ATOM 11 C2' C B2214 29.675 -12.930 66.476 1.00 35.39 C
ATOM 12 O2' C B2214 30.048 -13.517 65.249 1.00 35.39 O
ATOM 13 C1' C B2214 29.471 -11.453 66.261 1.00 35.37 C
ATOM 14 N1 C B2214 29.822 -10.641 67.426 1.00 35.34 N
ATOM 15 C2 C B2214 31.151 -10.210 67.675 1.00 35.27 C
ATOM 16 O2 C B2214 32.081 -10.648 66.980 1.00 35.23 O
ATOM 17 N3 C B2214 31.412 -9.348 68.699 1.00 35.27 N
ATOM 18 C4 C B2214 30.394 -8.908 69.450 1.00 35.33 C
ATOM 19 N4 C B2214 30.642 -8.074 70.459 1.00 35.34 N
ATOM 20 C5 C B2214 29.035 -9.329 69.182 1.00 35.40 C
ATOM 21 C6 C B2214 28.781 -10.153 68.164 1.00 35.41 C
ATOM 22 P U B2215 28.076 -15.785 67.772 1.00 38.46 P
ATOM 23 OP1 U B2215 27.459 -17.026 67.226 1.00 38.56 O
ATOM 24 OP2 U B2215 27.441 -15.114 68.933 1.00 38.49 O
ATOM 25 O5' U B2215 29.602 -16.034 68.072 1.00 38.39 O
TER
ATOM 2 P U A2570 34.118 -12.670 57.597 1.00 39.78 P
ATOM 3 OP1 U A2570 34.703 -13.376 56.429 1.00 39.84 O
ATOM 4 OP2 U A2570 34.220 -11.187 57.670 1.00 39.74 O
ATOM 5 O5' U A2570 32.589 -13.052 57.742 1.00 39.85 O
ATOM 6 C5' U A2570 31.923 -12.871 58.959 1.00 39.81 C
ATOM 7 C4' U A2570 30.867 -11.790 58.956 1.00 39.85 C
ATOM 8 O4' U A2570 30.393 -11.759 60.299 1.00 39.81 O
ATOM 9 C3' U A2570 31.371 -10.369 58.746 1.00 39.81 C
ATOM 10 O3' U A2570 30.244 -9.431 58.715 1.00 39.88 O
ATOM 11 C2' U A2570 32.129 -10.178 60.060 1.00 39.71 C
ATOM 12 O2' U A2570 32.415 -8.838 60.390 1.00 39.68 O
ATOM 13 C1' U A2570 31.159 -10.819 61.049 1.00 39.73 C
ATOM 14 N1 U A2570 31.825 -11.547 62.146 1.00 39.67 N
ATOM 15 C2 U A2570 31.644 -11.064 63.399 1.00 39.64 C
ATOM 16 O2 U A2570 30.995 -10.104 63.612 1.00 39.66 O
ATOM 17 N3 U A2570 32.314 -11.704 64.390 1.00 39.59 N
ATOM 18 C4 U A2570 33.159 -12.809 64.249 1.00 39.58 C
ATOM 19 O4 U A2570 33.689 -13.315 65.266 1.00 39.56 O
ATOM 20 C5 U A2570 33.298 -13.282 62.895 1.00 39.61 C
ATOM 21 C6 U A2570 32.641 -12.640 61.943 1.00 39.65 C
ATOM 22 P A A2571 29.909 -8.468 57.430 1.00 45.42 P
ATOM 23 OP1 A A2571 29.992 -9.310 56.219 1.00 45.49 O
ATOM 24 OP2 A A2571 30.771 -7.270 57.498 1.00 45.37 O
ATOM 25 O5' A A2571 28.360 -8.047 57.719 1.00 45.51 O
TER
ATOM 1 O3' C B2213 24.548 -9.637 67.154 1.00 40.23 O
ATOM 2 P C B2214 24.776 -10.741 68.290 1.00 35.69 P
ATOM 3 OP1 C B2214 23.608 -11.624 68.274 1.00 35.79 O
ATOM 4 OP2 C B2214 25.104 -10.008 69.564 1.00 35.67 O
ATOM 5 O5' C B2214 26.059 -11.543 67.747 1.00 35.60 O
ATOM 6 C5' C B2214 26.017 -12.274 66.531 1.00 35.61 C
ATOM 7 C4' C B2214 27.398 -12.498 66.002 1.00 35.52 C
ATOM 8 O4' C B2214 28.111 -11.240 65.974 1.00 35.46 O
ATOM 9 C3' C B2214 28.287 -13.388 66.843 1.00 35.48 C
ATOM 10 O3' C B2214 28.105 -14.744 66.576 1.00 35.53 O
ATOM 11 C2' C B2214 29.675 -12.930 66.476 1.00 35.39 C
ATOM 12 O2' C B2214 30.048 -13.517 65.249 1.00 35.39 O
ATOM 13 C1' C B2214 29.471 -11.453 66.261 1.00 35.37 C
ATOM 14 N1 C B2214 29.822 -10.641 67.426 1.00 35.34 N
ATOM 15 C2 C B2214 31.151 -10.210 67.675 1.00 35.27 C
ATOM 16 O2 C B2214 32.081 -10.648 66.980 1.00 35.23 O
ATOM 17 N3 C B2214 31.412 -9.348 68.699 1.00 35.27 N
ATOM 18 C4 C B2214 30.394 -8.908 69.450 1.00 35.33 C
ATOM 19 N4 C B2214 30.642 -8.074 70.459 1.00 35.34 N
ATOM 20 C5 C B2214 29.035 -9.329 69.182 1.00 35.40 C
ATOM 21 C6 C B2214 28.781 -10.153 68.164 1.00 35.41 C
ATOM 22 P U B2215 28.076 -15.785 67.772 1.00 38.46 P
ATOM 23 OP1 U B2215 27.459 -17.026 67.226 1.00 38.56 O
ATOM 24 OP2 U B2215 27.441 -15.114 68.933 1.00 38.49 O
ATOM 25 O5' U B2215 29.602 -16.034 68.072 1.00 38.39 O
TER
Atoms:
C4: (33.159,-12.809,64.249)
N3: (32.314,-11.704,64.390)
OP1: (34.703,-13.376,56.429)
OP2: (34.220,-11.187,57.670)
C2: (31.644,-11.064,63.399)
C1': (31.159,-10.819,61.049)
C3': (31.371,-10.369,58.746)
O5': (32.589,-13.052,57.742)
O4': (30.393,-11.759,60.299)
C5': (31.923,-12.871,58.959)
P: (34.118,-12.670,57.597)
C4': (30.867,-11.790,58.956)
C2': (32.129,-10.178,60.060)
O2': (32.415,-8.838,60.390)
N1: (31.825,-11.547,62.146)
O4: (33.689,-13.315,65.266)
O2: (30.995,-10.104,63.612)
C6: (32.641,-12.640,61.943)
C5: (33.298,-13.282,62.895)
O3': (30.244,-9.431,58.715)
N3: (32.314,-11.704,64.390)
OP1: (34.703,-13.376,56.429)
OP2: (34.220,-11.187,57.670)
C2: (31.644,-11.064,63.399)
C1': (31.159,-10.819,61.049)
C3': (31.371,-10.369,58.746)
O5': (32.589,-13.052,57.742)
O4': (30.393,-11.759,60.299)
C5': (31.923,-12.871,58.959)
P: (34.118,-12.670,57.597)
C4': (30.867,-11.790,58.956)
C2': (32.129,-10.178,60.060)
O2': (32.415,-8.838,60.390)
N1: (31.825,-11.547,62.146)
O4: (33.689,-13.315,65.266)
O2: (30.995,-10.104,63.612)
C6: (32.641,-12.640,61.943)
C5: (33.298,-13.282,62.895)
O3': (30.244,-9.431,58.715)
C2: (31.151,-10.210,67.675)
OP1: (23.608,-11.624,68.274)
OP2: (25.104,-10.008,69.564)
C4: (30.394,-8.908,69.450)
O5': (26.059,-11.543,67.747)
C3': (28.287,-13.388,66.843)
C1': (29.471,-11.453,66.261)
O4': (28.111,-11.240,65.974)
C5': (26.017,-12.274,66.531)
P: (24.776,-10.741,68.290)
O2: (32.081,-10.648,66.980)
C4': (27.398,-12.498,66.002)
C2': (29.675,-12.930,66.476)
O2': (30.048,-13.517,65.249)
N1: (29.822,-10.641,67.426)
N3: (31.412,-9.348,68.699)
N4: (30.642,-8.074,70.459)
C6: (28.781,-10.153,68.164)
C5: (29.035,-9.329,69.182)
O3': (28.105,-14.744,66.576)
OP1: (23.608,-11.624,68.274)
OP2: (25.104,-10.008,69.564)
C4: (30.394,-8.908,69.450)
O5': (26.059,-11.543,67.747)
C3': (28.287,-13.388,66.843)
C1': (29.471,-11.453,66.261)
O4': (28.111,-11.240,65.974)
C5': (26.017,-12.274,66.531)
P: (24.776,-10.741,68.290)
O2: (32.081,-10.648,66.980)
C4': (27.398,-12.498,66.002)
C2': (29.675,-12.930,66.476)
O2': (30.048,-13.517,65.249)
N1: (29.822,-10.641,67.426)
N3: (31.412,-9.348,68.699)
N4: (30.642,-8.074,70.459)
C6: (28.781,-10.153,68.164)
C5: (29.035,-9.329,69.182)
O3': (28.105,-14.744,66.576)
Image (generated by PyMOL):