Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1J9H:B3:A7
Extra
PDB:
ATOM 1 O3' G A 2 40.853 43.754 17.378 1.00 17.66 O
ATOM 2 P U A 3 40.456 45.073 16.525 1.00 19.70 P
ATOM 3 OP1 U A 3 39.140 45.600 16.985 1.00 20.12 O
ATOM 4 OP2 U A 3 40.668 44.797 15.080 1.00 20.78 O
ATOM 5 O5' U A 3 41.599 46.057 17.000 1.00 17.45 O
ATOM 6 C5' U A 3 42.672 46.459 16.160 1.00 19.24 C
ATOM 7 C4' U A 3 43.980 46.056 16.766 1.00 18.39 C
ATOM 8 O4' U A 3 44.107 46.578 18.107 1.00 18.05 O
ATOM 9 C3' U A 3 44.202 44.561 16.902 1.00 18.25 C
ATOM 10 O3' U A 3 44.786 44.132 15.678 1.00 19.72 O
ATOM 11 C2' U A 3 45.214 44.467 18.048 1.00 16.71 C
ATOM 12 O2' U A 3 46.569 44.557 17.693 1.00 18.89 O
ATOM 13 C1' U A 3 44.846 45.671 18.918 1.00 17.12 C
ATOM 14 N1 U A 3 44.010 45.296 20.068 1.00 15.69 N
ATOM 15 C2 U A 3 44.634 44.750 21.200 1.00 16.35 C
ATOM 16 O2 U A 3 45.829 44.486 21.265 1.00 19.93 O
ATOM 17 N3 U A 3 43.792 44.510 22.257 1.00 14.57 N
ATOM 18 C4 U A 3 42.416 44.733 22.304 1.00 15.50 C
ATOM 19 O4 U A 3 41.814 44.530 23.355 1.00 18.03 O
ATOM 20 C5 U A 3 41.845 45.240 21.089 1.00 16.11 C
ATOM 21 C6 U A 3 42.646 45.503 20.039 1.00 15.81 C
ATOM 22 P C A 4 44.068 43.054 14.746 1.00 22.45 P
ATOM 23 OP1 C A 4 43.478 43.798 13.560 1.00 22.92 O
ATOM 24 OP2 C A 4 43.231 42.137 15.557 1.00 20.89 O
ATOM 25 O5' C A 4 45.334 42.239 14.240 1.00 20.44 O
TER
ATOM 1 P A B 7 51.786 41.936 27.063 1.00 20.28 P
ATOM 2 OP1 A B 7 52.766 42.984 27.481 1.00 25.10 O
ATOM 3 OP2 A B 7 51.201 41.050 28.093 1.00 24.06 O
ATOM 4 O5' A B 7 50.618 42.687 26.299 1.00 19.53 O
ATOM 5 C5' A B 7 50.909 43.770 25.422 1.00 18.23 C
ATOM 6 C4' A B 7 49.633 44.314 24.830 1.00 17.11 C
ATOM 7 O4' A B 7 48.982 43.245 24.092 1.00 15.59 O
ATOM 8 C3' A B 7 48.554 44.749 25.810 1.00 16.79 C
ATOM 9 O3' A B 7 48.858 46.032 26.378 1.00 19.81 O
ATOM 10 C2' A B 7 47.328 44.746 24.886 1.00 16.07 C
ATOM 11 O2' A B 7 47.325 45.820 23.962 1.00 17.85 O
ATOM 12 C1' A B 7 47.562 43.439 24.115 1.00 14.24 C
ATOM 13 N9 A B 7 46.950 42.300 24.798 1.00 14.09 N
ATOM 14 C8 A B 7 47.624 41.349 25.529 1.00 14.49 C
ATOM 15 N7 A B 7 46.853 40.416 26.027 1.00 13.33 N
ATOM 16 C5 A B 7 45.586 40.768 25.599 1.00 13.54 C
ATOM 17 C6 A B 7 44.342 40.146 25.769 1.00 11.43 C
ATOM 18 N6 A B 7 44.196 38.974 26.403 1.00 14.85 N
ATOM 19 N1 A B 7 43.252 40.751 25.243 1.00 13.17 N
ATOM 20 C2 A B 7 43.432 41.901 24.558 1.00 14.11 C
ATOM 21 N3 A B 7 44.557 42.563 24.313 1.00 13.24 N
ATOM 22 C4 A B 7 45.618 41.939 24.857 1.00 12.90 C
ATOM 23 P C B 8 48.586 46.302 27.955 1.00 18.97 P
ATOM 24 OP1 C B 8 49.287 47.569 28.299 1.00 21.53 O
ATOM 25 OP2 C B 8 48.829 45.088 28.773 1.00 20.32 O
ATOM 26 O5' C B 8 47.036 46.623 27.999 1.00 18.07 O
TER
ATOM 2 P U A 3 40.456 45.073 16.525 1.00 19.70 P
ATOM 3 OP1 U A 3 39.140 45.600 16.985 1.00 20.12 O
ATOM 4 OP2 U A 3 40.668 44.797 15.080 1.00 20.78 O
ATOM 5 O5' U A 3 41.599 46.057 17.000 1.00 17.45 O
ATOM 6 C5' U A 3 42.672 46.459 16.160 1.00 19.24 C
ATOM 7 C4' U A 3 43.980 46.056 16.766 1.00 18.39 C
ATOM 8 O4' U A 3 44.107 46.578 18.107 1.00 18.05 O
ATOM 9 C3' U A 3 44.202 44.561 16.902 1.00 18.25 C
ATOM 10 O3' U A 3 44.786 44.132 15.678 1.00 19.72 O
ATOM 11 C2' U A 3 45.214 44.467 18.048 1.00 16.71 C
ATOM 12 O2' U A 3 46.569 44.557 17.693 1.00 18.89 O
ATOM 13 C1' U A 3 44.846 45.671 18.918 1.00 17.12 C
ATOM 14 N1 U A 3 44.010 45.296 20.068 1.00 15.69 N
ATOM 15 C2 U A 3 44.634 44.750 21.200 1.00 16.35 C
ATOM 16 O2 U A 3 45.829 44.486 21.265 1.00 19.93 O
ATOM 17 N3 U A 3 43.792 44.510 22.257 1.00 14.57 N
ATOM 18 C4 U A 3 42.416 44.733 22.304 1.00 15.50 C
ATOM 19 O4 U A 3 41.814 44.530 23.355 1.00 18.03 O
ATOM 20 C5 U A 3 41.845 45.240 21.089 1.00 16.11 C
ATOM 21 C6 U A 3 42.646 45.503 20.039 1.00 15.81 C
ATOM 22 P C A 4 44.068 43.054 14.746 1.00 22.45 P
ATOM 23 OP1 C A 4 43.478 43.798 13.560 1.00 22.92 O
ATOM 24 OP2 C A 4 43.231 42.137 15.557 1.00 20.89 O
ATOM 25 O5' C A 4 45.334 42.239 14.240 1.00 20.44 O
TER
ATOM 1 P A B 7 51.786 41.936 27.063 1.00 20.28 P
ATOM 2 OP1 A B 7 52.766 42.984 27.481 1.00 25.10 O
ATOM 3 OP2 A B 7 51.201 41.050 28.093 1.00 24.06 O
ATOM 4 O5' A B 7 50.618 42.687 26.299 1.00 19.53 O
ATOM 5 C5' A B 7 50.909 43.770 25.422 1.00 18.23 C
ATOM 6 C4' A B 7 49.633 44.314 24.830 1.00 17.11 C
ATOM 7 O4' A B 7 48.982 43.245 24.092 1.00 15.59 O
ATOM 8 C3' A B 7 48.554 44.749 25.810 1.00 16.79 C
ATOM 9 O3' A B 7 48.858 46.032 26.378 1.00 19.81 O
ATOM 10 C2' A B 7 47.328 44.746 24.886 1.00 16.07 C
ATOM 11 O2' A B 7 47.325 45.820 23.962 1.00 17.85 O
ATOM 12 C1' A B 7 47.562 43.439 24.115 1.00 14.24 C
ATOM 13 N9 A B 7 46.950 42.300 24.798 1.00 14.09 N
ATOM 14 C8 A B 7 47.624 41.349 25.529 1.00 14.49 C
ATOM 15 N7 A B 7 46.853 40.416 26.027 1.00 13.33 N
ATOM 16 C5 A B 7 45.586 40.768 25.599 1.00 13.54 C
ATOM 17 C6 A B 7 44.342 40.146 25.769 1.00 11.43 C
ATOM 18 N6 A B 7 44.196 38.974 26.403 1.00 14.85 N
ATOM 19 N1 A B 7 43.252 40.751 25.243 1.00 13.17 N
ATOM 20 C2 A B 7 43.432 41.901 24.558 1.00 14.11 C
ATOM 21 N3 A B 7 44.557 42.563 24.313 1.00 13.24 N
ATOM 22 C4 A B 7 45.618 41.939 24.857 1.00 12.90 C
ATOM 23 P C B 8 48.586 46.302 27.955 1.00 18.97 P
ATOM 24 OP1 C B 8 49.287 47.569 28.299 1.00 21.53 O
ATOM 25 OP2 C B 8 48.829 45.088 28.773 1.00 20.32 O
ATOM 26 O5' C B 8 47.036 46.623 27.999 1.00 18.07 O
TER
Atoms:
C4: (42.416,44.733,22.304)
N3: (43.792,44.510,22.257)
OP1: (39.140,45.600,16.985)
OP2: (40.668,44.797,15.080)
C2: (44.634,44.750,21.200)
C1': (44.846,45.671,18.918)
C3': (44.202,44.561,16.902)
O5': (41.599,46.057,17.000)
O4': (44.107,46.578,18.107)
C5': (42.672,46.459,16.160)
P: (40.456,45.073,16.525)
C4': (43.980,46.056,16.766)
C2': (45.214,44.467,18.048)
O2': (46.569,44.557,17.693)
N1: (44.010,45.296,20.068)
O4: (41.814,44.530,23.355)
O2: (45.829,44.486,21.265)
C6: (42.646,45.503,20.039)
C5: (41.845,45.240,21.089)
O3': (44.786,44.132,15.678)
N3: (43.792,44.510,22.257)
OP1: (39.140,45.600,16.985)
OP2: (40.668,44.797,15.080)
C2: (44.634,44.750,21.200)
C1': (44.846,45.671,18.918)
C3': (44.202,44.561,16.902)
O5': (41.599,46.057,17.000)
O4': (44.107,46.578,18.107)
C5': (42.672,46.459,16.160)
P: (40.456,45.073,16.525)
C4': (43.980,46.056,16.766)
C2': (45.214,44.467,18.048)
O2': (46.569,44.557,17.693)
N1: (44.010,45.296,20.068)
O4: (41.814,44.530,23.355)
O2: (45.829,44.486,21.265)
C6: (42.646,45.503,20.039)
C5: (41.845,45.240,21.089)
O3': (44.786,44.132,15.678)
OP1: (52.766,42.984,27.481)
OP2: (51.201,41.050,28.093)
C3': (48.554,44.749,25.810)
C1': (47.562,43.439,24.115)
C5': (50.909,43.770,25.422)
O4': (48.982,43.245,24.092)
C8: (47.624,41.349,25.529)
O2': (47.325,45.820,23.962)
C6: (44.342,40.146,25.769)
C5: (45.586,40.768,25.599)
C4: (45.618,41.939,24.857)
P: (51.786,41.936,27.063)
C4': (49.633,44.314,24.830)
C2': (47.328,44.746,24.886)
C2: (43.432,41.901,24.558)
N1: (43.252,40.751,25.243)
N3: (44.557,42.563,24.313)
N6: (44.196,38.974,26.403)
N7: (46.853,40.416,26.027)
N9: (46.950,42.300,24.798)
O5': (50.618,42.687,26.299)
O3': (48.858,46.032,26.378)
OP2: (51.201,41.050,28.093)
C3': (48.554,44.749,25.810)
C1': (47.562,43.439,24.115)
C5': (50.909,43.770,25.422)
O4': (48.982,43.245,24.092)
C8: (47.624,41.349,25.529)
O2': (47.325,45.820,23.962)
C6: (44.342,40.146,25.769)
C5: (45.586,40.768,25.599)
C4: (45.618,41.939,24.857)
P: (51.786,41.936,27.063)
C4': (49.633,44.314,24.830)
C2': (47.328,44.746,24.886)
C2: (43.432,41.901,24.558)
N1: (43.252,40.751,25.243)
N3: (44.557,42.563,24.313)
N6: (44.196,38.974,26.403)
N7: (46.853,40.416,26.027)
N9: (46.950,42.300,24.798)
O5': (50.618,42.687,26.299)
O3': (48.858,46.032,26.378)
Image (generated by PyMOL):