Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1J9H:D3:C7
Extra
PDB:
ATOM 1 O3' G A 2 27.093 18.989 37.670 1.00 13.41 O
ATOM 2 P U A 3 25.886 18.698 36.652 1.00 12.10 P
ATOM 3 OP1 U A 3 25.425 17.298 36.861 1.00 13.94 O
ATOM 4 OP2 U A 3 26.252 19.119 35.316 1.00 12.33 O
ATOM 5 O5' U A 3 24.820 19.723 37.212 1.00 11.54 O
ATOM 6 C5' U A 3 24.376 20.822 36.436 1.00 10.28 C
ATOM 7 C4' U A 3 24.779 22.132 37.079 1.00 10.32 C
ATOM 8 O4' U A 3 24.247 22.230 38.416 1.00 11.32 O
ATOM 9 C3' U A 3 26.287 22.310 37.229 1.00 10.20 C
ATOM 10 O3' U A 3 26.701 22.871 35.978 1.00 13.05 O
ATOM 11 C2' U A 3 26.369 23.321 38.359 1.00 9.96 C
ATOM 12 O2' U A 3 26.129 24.652 37.902 1.00 11.87 O
ATOM 13 C1' U A 3 25.214 22.848 39.256 1.00 11.75 C
ATOM 14 N1 U A 3 25.588 21.897 40.320 1.00 10.74 N
ATOM 15 C2 U A 3 26.251 22.420 41.416 1.00 11.03 C
ATOM 16 O2 U A 3 26.596 23.586 41.478 1.00 11.44 O
ATOM 17 N3 U A 3 26.488 21.532 42.434 1.00 9.80 N
ATOM 18 C4 U A 3 26.141 20.170 42.454 1.00 12.73 C
ATOM 19 O4 U A 3 26.322 19.506 43.484 1.00 14.26 O
ATOM 20 C5 U A 3 25.494 19.700 41.281 1.00 12.09 C
ATOM 21 C6 U A 3 25.248 20.542 40.269 1.00 11.76 C
ATOM 22 P C A 4 27.948 22.267 35.135 1.00 11.05 P
ATOM 23 OP1 C A 4 27.422 21.706 33.889 1.00 12.20 O
ATOM 24 OP2 C A 4 28.810 21.435 36.000 1.00 12.27 O
ATOM 25 O5' C A 4 28.692 23.626 34.755 1.00 12.24 O
TER
ATOM 1 P A B 7 28.527 29.140 47.791 1.00 13.15 P
ATOM 2 OP1 A B 7 27.497 30.162 48.188 1.00 16.77 O
ATOM 3 OP2 A B 7 29.288 28.426 48.808 1.00 13.73 O
ATOM 4 O5' A B 7 27.849 27.993 46.942 1.00 11.47 O
ATOM 5 C5' A B 7 26.898 28.315 45.935 1.00 11.53 C
ATOM 6 C4' A B 7 26.414 27.070 45.262 1.00 10.44 C
ATOM 7 O4' A B 7 27.502 26.462 44.524 1.00 11.36 O
ATOM 8 C3' A B 7 25.945 25.951 46.175 1.00 9.05 C
ATOM 9 O3' A B 7 24.635 26.212 46.674 1.00 10.66 O
ATOM 10 C2' A B 7 25.996 24.772 45.227 1.00 10.64 C
ATOM 11 O2' A B 7 24.966 24.789 44.260 1.00 11.24 O
ATOM 12 C1' A B 7 27.323 25.050 44.529 1.00 8.50 C
ATOM 13 N9 A B 7 28.439 24.470 45.267 1.00 10.87 N
ATOM 14 C8 A B 7 29.346 25.117 46.071 1.00 10.24 C
ATOM 15 N7 A B 7 30.283 24.333 46.554 1.00 10.81 N
ATOM 16 C5 A B 7 29.953 23.083 46.058 1.00 9.29 C
ATOM 17 C6 A B 7 30.579 21.825 46.181 1.00 10.70 C
ATOM 18 N6 A B 7 31.735 21.663 46.825 1.00 12.53 N
ATOM 19 N1 A B 7 29.978 20.753 45.593 1.00 12.00 N
ATOM 20 C2 A B 7 28.832 20.951 44.885 1.00 10.78 C
ATOM 21 N3 A B 7 28.179 22.102 44.662 1.00 11.30 N
ATOM 22 C4 A B 7 28.806 23.142 45.280 1.00 10.33 C
ATOM 23 P C B 8 24.254 25.785 48.185 1.00 11.18 P
ATOM 24 OP1 C B 8 22.974 26.486 48.513 1.00 14.64 O
ATOM 25 OP2 C B 8 25.393 25.961 49.026 1.00 13.25 O
ATOM 26 O5' C B 8 23.935 24.240 48.113 1.00 9.70 O
TER
ATOM 2 P U A 3 25.886 18.698 36.652 1.00 12.10 P
ATOM 3 OP1 U A 3 25.425 17.298 36.861 1.00 13.94 O
ATOM 4 OP2 U A 3 26.252 19.119 35.316 1.00 12.33 O
ATOM 5 O5' U A 3 24.820 19.723 37.212 1.00 11.54 O
ATOM 6 C5' U A 3 24.376 20.822 36.436 1.00 10.28 C
ATOM 7 C4' U A 3 24.779 22.132 37.079 1.00 10.32 C
ATOM 8 O4' U A 3 24.247 22.230 38.416 1.00 11.32 O
ATOM 9 C3' U A 3 26.287 22.310 37.229 1.00 10.20 C
ATOM 10 O3' U A 3 26.701 22.871 35.978 1.00 13.05 O
ATOM 11 C2' U A 3 26.369 23.321 38.359 1.00 9.96 C
ATOM 12 O2' U A 3 26.129 24.652 37.902 1.00 11.87 O
ATOM 13 C1' U A 3 25.214 22.848 39.256 1.00 11.75 C
ATOM 14 N1 U A 3 25.588 21.897 40.320 1.00 10.74 N
ATOM 15 C2 U A 3 26.251 22.420 41.416 1.00 11.03 C
ATOM 16 O2 U A 3 26.596 23.586 41.478 1.00 11.44 O
ATOM 17 N3 U A 3 26.488 21.532 42.434 1.00 9.80 N
ATOM 18 C4 U A 3 26.141 20.170 42.454 1.00 12.73 C
ATOM 19 O4 U A 3 26.322 19.506 43.484 1.00 14.26 O
ATOM 20 C5 U A 3 25.494 19.700 41.281 1.00 12.09 C
ATOM 21 C6 U A 3 25.248 20.542 40.269 1.00 11.76 C
ATOM 22 P C A 4 27.948 22.267 35.135 1.00 11.05 P
ATOM 23 OP1 C A 4 27.422 21.706 33.889 1.00 12.20 O
ATOM 24 OP2 C A 4 28.810 21.435 36.000 1.00 12.27 O
ATOM 25 O5' C A 4 28.692 23.626 34.755 1.00 12.24 O
TER
ATOM 1 P A B 7 28.527 29.140 47.791 1.00 13.15 P
ATOM 2 OP1 A B 7 27.497 30.162 48.188 1.00 16.77 O
ATOM 3 OP2 A B 7 29.288 28.426 48.808 1.00 13.73 O
ATOM 4 O5' A B 7 27.849 27.993 46.942 1.00 11.47 O
ATOM 5 C5' A B 7 26.898 28.315 45.935 1.00 11.53 C
ATOM 6 C4' A B 7 26.414 27.070 45.262 1.00 10.44 C
ATOM 7 O4' A B 7 27.502 26.462 44.524 1.00 11.36 O
ATOM 8 C3' A B 7 25.945 25.951 46.175 1.00 9.05 C
ATOM 9 O3' A B 7 24.635 26.212 46.674 1.00 10.66 O
ATOM 10 C2' A B 7 25.996 24.772 45.227 1.00 10.64 C
ATOM 11 O2' A B 7 24.966 24.789 44.260 1.00 11.24 O
ATOM 12 C1' A B 7 27.323 25.050 44.529 1.00 8.50 C
ATOM 13 N9 A B 7 28.439 24.470 45.267 1.00 10.87 N
ATOM 14 C8 A B 7 29.346 25.117 46.071 1.00 10.24 C
ATOM 15 N7 A B 7 30.283 24.333 46.554 1.00 10.81 N
ATOM 16 C5 A B 7 29.953 23.083 46.058 1.00 9.29 C
ATOM 17 C6 A B 7 30.579 21.825 46.181 1.00 10.70 C
ATOM 18 N6 A B 7 31.735 21.663 46.825 1.00 12.53 N
ATOM 19 N1 A B 7 29.978 20.753 45.593 1.00 12.00 N
ATOM 20 C2 A B 7 28.832 20.951 44.885 1.00 10.78 C
ATOM 21 N3 A B 7 28.179 22.102 44.662 1.00 11.30 N
ATOM 22 C4 A B 7 28.806 23.142 45.280 1.00 10.33 C
ATOM 23 P C B 8 24.254 25.785 48.185 1.00 11.18 P
ATOM 24 OP1 C B 8 22.974 26.486 48.513 1.00 14.64 O
ATOM 25 OP2 C B 8 25.393 25.961 49.026 1.00 13.25 O
ATOM 26 O5' C B 8 23.935 24.240 48.113 1.00 9.70 O
TER
Atoms:
C4: (26.141,20.170,42.454)
N3: (26.488,21.532,42.434)
OP1: (25.425,17.298,36.861)
OP2: (26.252,19.119,35.316)
C2: (26.251,22.420,41.416)
C1': (25.214,22.848,39.256)
C3': (26.287,22.310,37.229)
O5': (24.820,19.723,37.212)
O4': (24.247,22.230,38.416)
C5': (24.376,20.822,36.436)
P: (25.886,18.698,36.652)
C4': (24.779,22.132,37.079)
C2': (26.369,23.321,38.359)
O2': (26.129,24.652,37.902)
N1: (25.588,21.897,40.320)
O4: (26.322,19.506,43.484)
O2: (26.596,23.586,41.478)
C6: (25.248,20.542,40.269)
C5: (25.494,19.700,41.281)
O3': (26.701,22.871,35.978)
N3: (26.488,21.532,42.434)
OP1: (25.425,17.298,36.861)
OP2: (26.252,19.119,35.316)
C2: (26.251,22.420,41.416)
C1': (25.214,22.848,39.256)
C3': (26.287,22.310,37.229)
O5': (24.820,19.723,37.212)
O4': (24.247,22.230,38.416)
C5': (24.376,20.822,36.436)
P: (25.886,18.698,36.652)
C4': (24.779,22.132,37.079)
C2': (26.369,23.321,38.359)
O2': (26.129,24.652,37.902)
N1: (25.588,21.897,40.320)
O4: (26.322,19.506,43.484)
O2: (26.596,23.586,41.478)
C6: (25.248,20.542,40.269)
C5: (25.494,19.700,41.281)
O3': (26.701,22.871,35.978)
OP1: (27.497,30.162,48.188)
OP2: (29.288,28.426,48.808)
C3': (25.945,25.951,46.175)
C1': (27.323,25.050,44.529)
C5': (26.898,28.315,45.935)
O4': (27.502,26.462,44.524)
C8: (29.346,25.117,46.071)
O2': (24.966,24.789,44.260)
C6: (30.579,21.825,46.181)
C5: (29.953,23.083,46.058)
C4: (28.806,23.142,45.280)
P: (28.527,29.140,47.791)
C4': (26.414,27.070,45.262)
C2': (25.996,24.772,45.227)
C2: (28.832,20.951,44.885)
N1: (29.978,20.753,45.593)
N3: (28.179,22.102,44.662)
N6: (31.735,21.663,46.825)
N7: (30.283,24.333,46.554)
N9: (28.439,24.470,45.267)
O5': (27.849,27.993,46.942)
O3': (24.635,26.212,46.674)
OP2: (29.288,28.426,48.808)
C3': (25.945,25.951,46.175)
C1': (27.323,25.050,44.529)
C5': (26.898,28.315,45.935)
O4': (27.502,26.462,44.524)
C8: (29.346,25.117,46.071)
O2': (24.966,24.789,44.260)
C6: (30.579,21.825,46.181)
C5: (29.953,23.083,46.058)
C4: (28.806,23.142,45.280)
P: (28.527,29.140,47.791)
C4': (26.414,27.070,45.262)
C2': (25.996,24.772,45.227)
C2: (28.832,20.951,44.885)
N1: (29.978,20.753,45.593)
N3: (28.179,22.102,44.662)
N6: (31.735,21.663,46.825)
N7: (30.283,24.333,46.554)
N9: (28.439,24.470,45.267)
O5': (27.849,27.993,46.942)
O3': (24.635,26.212,46.674)
Image (generated by PyMOL):