Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2009:A2029
Extra
PDB:
ATOM 1 O3' A A2008 34.487 132.868 104.071 1.00 34.60 O
ATOM 2 P U A2009 34.604 134.376 104.601 1.00 35.62 P
ATOM 3 OP1 U A2009 33.217 134.727 104.943 1.00 34.83 O
ATOM 4 OP2 U A2009 35.364 135.214 103.662 1.00 32.61 O
ATOM 5 O5' U A2009 35.479 134.303 105.923 1.00 33.97 O
ATOM 6 C5' U A2009 36.500 135.287 106.177 1.00 32.91 C
ATOM 7 C4' U A2009 36.834 135.308 107.643 1.00 32.40 C
ATOM 8 O4' U A2009 35.695 135.811 108.387 1.00 34.11 O
ATOM 9 C3' U A2009 37.100 133.943 108.235 1.00 33.23 C
ATOM 10 O3' U A2009 38.410 133.460 107.961 1.00 32.25 O
ATOM 11 C2' U A2009 36.711 134.110 109.703 1.00 33.01 C
ATOM 12 O2' U A2009 37.746 134.597 110.537 1.00 32.20 O
ATOM 13 C1' U A2009 35.556 135.114 109.612 1.00 32.60 C
ATOM 14 N1 U A2009 34.218 134.486 109.654 1.00 32.14 N
ATOM 15 C2 U A2009 33.614 134.292 110.894 1.00 32.45 C
ATOM 16 O2 U A2009 34.071 134.717 111.936 1.00 34.48 O
ATOM 17 N3 U A2009 32.423 133.595 110.859 1.00 32.52 N
ATOM 18 C4 U A2009 31.758 133.116 109.746 1.00 33.28 C
ATOM 19 O4 U A2009 30.830 132.322 109.898 1.00 32.54 O
ATOM 20 C5 U A2009 32.395 133.427 108.505 1.00 33.50 C
ATOM 21 C6 U A2009 33.575 134.071 108.499 1.00 32.08 C
ATOM 22 P U A2010 38.582 132.094 107.126 1.00 35.11 P
ATOM 23 OP1 U A2010 39.231 132.444 105.851 1.00 32.87 O
ATOM 24 OP2 U A2010 37.296 131.369 107.110 1.00 34.30 O
ATOM 25 O5' U A2010 39.581 131.230 108.004 1.00 34.51 O
TER
ATOM 1 O3' G B2028 34.439 133.881 120.664 1.00 33.93 O
ATOM 2 P A B2029 33.319 134.982 120.411 1.00 36.21 P
ATOM 3 OP1 A B2029 33.792 136.274 120.953 1.00 35.77 O
ATOM 4 OP2 A B2029 32.067 134.374 120.912 1.00 35.96 O
ATOM 5 O5' A B2029 33.227 135.093 118.832 1.00 36.71 O
ATOM 6 C5' A B2029 34.282 135.662 118.060 1.00 37.67 C
ATOM 7 C4' A B2029 33.884 135.713 116.609 1.00 38.80 C
ATOM 8 O4' A B2029 33.870 134.384 116.041 1.00 39.77 O
ATOM 9 C3' A B2029 32.513 136.274 116.290 1.00 39.84 C
ATOM 10 O3' A B2029 32.511 137.689 116.262 1.00 40.26 O
ATOM 11 C2' A B2029 32.265 135.695 114.910 1.00 40.76 C
ATOM 12 O2' A B2029 33.011 136.381 113.930 1.00 43.15 O
ATOM 13 C1' A B2029 32.875 134.308 115.047 1.00 38.63 C
ATOM 14 N9 A B2029 31.865 133.356 115.485 1.00 37.24 N
ATOM 15 C8 A B2029 31.525 133.030 116.771 1.00 36.27 C
ATOM 16 N7 A B2029 30.572 132.138 116.855 1.00 35.96 N
ATOM 17 C5 A B2029 30.264 131.860 115.533 1.00 35.94 C
ATOM 18 C6 A B2029 29.341 131.002 114.953 1.00 35.68 C
ATOM 19 N6 A B2029 28.526 130.239 115.661 1.00 37.07 N
ATOM 20 N1 A B2029 29.278 130.956 113.607 1.00 35.51 N
ATOM 21 C2 A B2029 30.093 131.740 112.905 1.00 36.19 C
ATOM 22 N3 A B2029 31.011 132.600 113.338 1.00 37.22 N
ATOM 23 C4 A B2029 31.049 132.607 114.680 1.00 37.11 C
ATOM 24 P C B2030 31.320 138.496 116.980 1.00 41.53 P
ATOM 25 OP1 C B2030 31.975 139.558 117.788 1.00 41.29 O
ATOM 26 OP2 C B2030 30.421 137.529 117.645 1.00 40.33 O
ATOM 27 O5' C B2030 30.485 139.133 115.775 1.00 40.57 O
TER
ATOM 2 P U A2009 34.604 134.376 104.601 1.00 35.62 P
ATOM 3 OP1 U A2009 33.217 134.727 104.943 1.00 34.83 O
ATOM 4 OP2 U A2009 35.364 135.214 103.662 1.00 32.61 O
ATOM 5 O5' U A2009 35.479 134.303 105.923 1.00 33.97 O
ATOM 6 C5' U A2009 36.500 135.287 106.177 1.00 32.91 C
ATOM 7 C4' U A2009 36.834 135.308 107.643 1.00 32.40 C
ATOM 8 O4' U A2009 35.695 135.811 108.387 1.00 34.11 O
ATOM 9 C3' U A2009 37.100 133.943 108.235 1.00 33.23 C
ATOM 10 O3' U A2009 38.410 133.460 107.961 1.00 32.25 O
ATOM 11 C2' U A2009 36.711 134.110 109.703 1.00 33.01 C
ATOM 12 O2' U A2009 37.746 134.597 110.537 1.00 32.20 O
ATOM 13 C1' U A2009 35.556 135.114 109.612 1.00 32.60 C
ATOM 14 N1 U A2009 34.218 134.486 109.654 1.00 32.14 N
ATOM 15 C2 U A2009 33.614 134.292 110.894 1.00 32.45 C
ATOM 16 O2 U A2009 34.071 134.717 111.936 1.00 34.48 O
ATOM 17 N3 U A2009 32.423 133.595 110.859 1.00 32.52 N
ATOM 18 C4 U A2009 31.758 133.116 109.746 1.00 33.28 C
ATOM 19 O4 U A2009 30.830 132.322 109.898 1.00 32.54 O
ATOM 20 C5 U A2009 32.395 133.427 108.505 1.00 33.50 C
ATOM 21 C6 U A2009 33.575 134.071 108.499 1.00 32.08 C
ATOM 22 P U A2010 38.582 132.094 107.126 1.00 35.11 P
ATOM 23 OP1 U A2010 39.231 132.444 105.851 1.00 32.87 O
ATOM 24 OP2 U A2010 37.296 131.369 107.110 1.00 34.30 O
ATOM 25 O5' U A2010 39.581 131.230 108.004 1.00 34.51 O
TER
ATOM 1 O3' G B2028 34.439 133.881 120.664 1.00 33.93 O
ATOM 2 P A B2029 33.319 134.982 120.411 1.00 36.21 P
ATOM 3 OP1 A B2029 33.792 136.274 120.953 1.00 35.77 O
ATOM 4 OP2 A B2029 32.067 134.374 120.912 1.00 35.96 O
ATOM 5 O5' A B2029 33.227 135.093 118.832 1.00 36.71 O
ATOM 6 C5' A B2029 34.282 135.662 118.060 1.00 37.67 C
ATOM 7 C4' A B2029 33.884 135.713 116.609 1.00 38.80 C
ATOM 8 O4' A B2029 33.870 134.384 116.041 1.00 39.77 O
ATOM 9 C3' A B2029 32.513 136.274 116.290 1.00 39.84 C
ATOM 10 O3' A B2029 32.511 137.689 116.262 1.00 40.26 O
ATOM 11 C2' A B2029 32.265 135.695 114.910 1.00 40.76 C
ATOM 12 O2' A B2029 33.011 136.381 113.930 1.00 43.15 O
ATOM 13 C1' A B2029 32.875 134.308 115.047 1.00 38.63 C
ATOM 14 N9 A B2029 31.865 133.356 115.485 1.00 37.24 N
ATOM 15 C8 A B2029 31.525 133.030 116.771 1.00 36.27 C
ATOM 16 N7 A B2029 30.572 132.138 116.855 1.00 35.96 N
ATOM 17 C5 A B2029 30.264 131.860 115.533 1.00 35.94 C
ATOM 18 C6 A B2029 29.341 131.002 114.953 1.00 35.68 C
ATOM 19 N6 A B2029 28.526 130.239 115.661 1.00 37.07 N
ATOM 20 N1 A B2029 29.278 130.956 113.607 1.00 35.51 N
ATOM 21 C2 A B2029 30.093 131.740 112.905 1.00 36.19 C
ATOM 22 N3 A B2029 31.011 132.600 113.338 1.00 37.22 N
ATOM 23 C4 A B2029 31.049 132.607 114.680 1.00 37.11 C
ATOM 24 P C B2030 31.320 138.496 116.980 1.00 41.53 P
ATOM 25 OP1 C B2030 31.975 139.558 117.788 1.00 41.29 O
ATOM 26 OP2 C B2030 30.421 137.529 117.645 1.00 40.33 O
ATOM 27 O5' C B2030 30.485 139.133 115.775 1.00 40.57 O
TER
Atoms:
C4: (31.758,133.116,109.746)
N3: (32.423,133.595,110.859)
OP1: (33.217,134.727,104.943)
OP2: (35.364,135.214,103.662)
C2: (33.614,134.292,110.894)
C1': (35.556,135.114,109.612)
C3': (37.100,133.943,108.235)
O5': (35.479,134.303,105.923)
O4': (35.695,135.811,108.387)
C5': (36.500,135.287,106.177)
P: (34.604,134.376,104.601)
C4': (36.834,135.308,107.643)
C2': (36.711,134.110,109.703)
O2': (37.746,134.597,110.537)
N1: (34.218,134.486,109.654)
O4: (30.830,132.322,109.898)
O2: (34.071,134.717,111.936)
C6: (33.575,134.071,108.499)
C5: (32.395,133.427,108.505)
O3': (38.410,133.460,107.961)
N3: (32.423,133.595,110.859)
OP1: (33.217,134.727,104.943)
OP2: (35.364,135.214,103.662)
C2: (33.614,134.292,110.894)
C1': (35.556,135.114,109.612)
C3': (37.100,133.943,108.235)
O5': (35.479,134.303,105.923)
O4': (35.695,135.811,108.387)
C5': (36.500,135.287,106.177)
P: (34.604,134.376,104.601)
C4': (36.834,135.308,107.643)
C2': (36.711,134.110,109.703)
O2': (37.746,134.597,110.537)
N1: (34.218,134.486,109.654)
O4: (30.830,132.322,109.898)
O2: (34.071,134.717,111.936)
C6: (33.575,134.071,108.499)
C5: (32.395,133.427,108.505)
O3': (38.410,133.460,107.961)
OP1: (33.792,136.274,120.953)
OP2: (32.067,134.374,120.912)
C3': (32.513,136.274,116.290)
C1': (32.875,134.308,115.047)
C5': (34.282,135.662,118.060)
O4': (33.870,134.384,116.041)
C8: (31.525,133.030,116.771)
O2': (33.011,136.381,113.930)
C6: (29.341,131.002,114.953)
C5: (30.264,131.860,115.533)
C4: (31.049,132.607,114.680)
P: (33.319,134.982,120.411)
C4': (33.884,135.713,116.609)
C2': (32.265,135.695,114.910)
C2: (30.093,131.740,112.905)
N1: (29.278,130.956,113.607)
N3: (31.011,132.600,113.338)
N6: (28.526,130.239,115.661)
N7: (30.572,132.138,116.855)
N9: (31.865,133.356,115.485)
O5': (33.227,135.093,118.832)
O3': (32.511,137.689,116.262)
OP2: (32.067,134.374,120.912)
C3': (32.513,136.274,116.290)
C1': (32.875,134.308,115.047)
C5': (34.282,135.662,118.060)
O4': (33.870,134.384,116.041)
C8: (31.525,133.030,116.771)
O2': (33.011,136.381,113.930)
C6: (29.341,131.002,114.953)
C5: (30.264,131.860,115.533)
C4: (31.049,132.607,114.680)
P: (33.319,134.982,120.411)
C4': (33.884,135.713,116.609)
C2': (32.265,135.695,114.910)
C2: (30.093,131.740,112.905)
N1: (29.278,130.956,113.607)
N3: (31.011,132.600,113.338)
N6: (28.526,130.239,115.661)
N7: (30.572,132.138,116.855)
N9: (31.865,133.356,115.485)
O5': (33.227,135.093,118.832)
O3': (32.511,137.689,116.262)
Image (generated by PyMOL):