Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A334:A317
Extra
PDB:
ATOM 1 O3' G A 333 27.882 135.130 26.959 1.00 54.74 O
ATOM 2 P U A 334 27.946 133.962 25.844 1.00 56.00 P
ATOM 3 OP1 U A 334 29.254 133.272 26.023 1.00 56.64 O
ATOM 4 OP2 U A 334 27.596 134.517 24.511 1.00 56.86 O
ATOM 5 O5' U A 334 26.855 132.896 26.294 1.00 56.04 O
ATOM 6 C5' U A 334 27.111 132.044 27.431 1.00 56.30 C
ATOM 7 C4' U A 334 25.982 131.074 27.623 1.00 55.73 C
ATOM 8 O4' U A 334 24.791 131.791 28.025 1.00 56.86 O
ATOM 9 C3' U A 334 25.590 130.297 26.384 1.00 55.19 C
ATOM 10 O3' U A 334 26.401 129.135 26.262 1.00 54.16 O
ATOM 11 C2' U A 334 24.143 129.951 26.682 1.00 56.67 C
ATOM 12 O2' U A 334 24.060 128.871 27.593 1.00 57.39 O
ATOM 13 C1' U A 334 23.667 131.225 27.390 1.00 58.06 C
ATOM 14 N1 U A 334 23.102 132.235 26.478 1.00 60.74 N
ATOM 15 C2 U A 334 21.827 132.018 25.964 1.00 61.78 C
ATOM 16 O2 U A 334 21.158 131.033 26.239 1.00 62.28 O
ATOM 17 N3 U A 334 21.370 132.997 25.111 1.00 62.30 N
ATOM 18 C4 U A 334 22.036 134.139 24.724 1.00 63.13 C
ATOM 19 O4 U A 334 21.463 134.956 24.000 1.00 63.46 O
ATOM 20 C5 U A 334 23.342 134.293 25.294 1.00 63.74 C
ATOM 21 C6 U A 334 23.816 133.367 26.134 1.00 62.11 C
ATOM 22 P A A 335 26.975 128.713 24.824 1.00 54.67 P
ATOM 23 OP1 A A 335 27.952 127.615 25.007 1.00 54.92 O
ATOM 24 OP2 A A 335 27.409 129.980 24.169 1.00 53.69 O
ATOM 25 O5' A A 335 25.701 128.119 24.070 1.00 56.57 O
TER
ATOM 1 O3' U B 316 19.173 124.741 21.770 1.00 55.24 O
ATOM 2 P A B 317 18.821 124.563 23.316 1.00 55.02 P
ATOM 3 OP1 A B 317 19.759 123.548 23.853 1.00 51.84 O
ATOM 4 OP2 A B 317 17.358 124.317 23.368 1.00 54.24 O
ATOM 5 O5' A B 317 19.117 125.993 23.968 1.00 53.97 O
ATOM 6 C5' A B 317 20.279 126.232 24.781 1.00 53.71 C
ATOM 7 C4' A B 317 20.237 127.633 25.347 1.00 53.88 C
ATOM 8 O4' A B 317 20.080 128.575 24.242 1.00 53.96 O
ATOM 9 C3' A B 317 19.088 127.915 26.316 1.00 54.17 C
ATOM 10 O3' A B 317 19.496 128.886 27.313 1.00 55.06 O
ATOM 11 C2' A B 317 18.051 128.528 25.374 1.00 54.17 C
ATOM 12 O2' A B 317 17.059 129.320 25.988 1.00 54.58 O
ATOM 13 C1' A B 317 18.947 129.377 24.476 1.00 55.02 C
ATOM 14 N9 A B 317 18.399 129.828 23.191 1.00 57.19 N
ATOM 15 C8 A B 317 17.679 129.115 22.256 1.00 58.13 C
ATOM 16 N7 A B 317 17.350 129.814 21.196 1.00 58.34 N
ATOM 17 C5 A B 317 17.886 131.069 21.444 1.00 57.56 C
ATOM 18 C6 A B 317 17.899 132.257 20.692 1.00 57.28 C
ATOM 19 N6 A B 317 17.360 132.385 19.478 1.00 55.55 N
ATOM 20 N1 A B 317 18.509 133.332 21.234 1.00 57.71 N
ATOM 21 C2 A B 317 19.082 133.214 22.440 1.00 58.25 C
ATOM 22 N3 A B 317 19.151 132.152 23.235 1.00 57.88 N
ATOM 23 C4 A B 317 18.527 131.097 22.673 1.00 57.86 C
ATOM 24 P C B 318 20.319 128.428 28.636 1.00 53.87 P
ATOM 25 OP1 C B 318 20.370 129.631 29.493 1.00 54.03 O
ATOM 26 OP2 C B 318 21.589 127.721 28.262 1.00 51.34 O
ATOM 27 O5' C B 318 19.373 127.400 29.407 1.00 54.11 O
TER
ATOM 2 P U A 334 27.946 133.962 25.844 1.00 56.00 P
ATOM 3 OP1 U A 334 29.254 133.272 26.023 1.00 56.64 O
ATOM 4 OP2 U A 334 27.596 134.517 24.511 1.00 56.86 O
ATOM 5 O5' U A 334 26.855 132.896 26.294 1.00 56.04 O
ATOM 6 C5' U A 334 27.111 132.044 27.431 1.00 56.30 C
ATOM 7 C4' U A 334 25.982 131.074 27.623 1.00 55.73 C
ATOM 8 O4' U A 334 24.791 131.791 28.025 1.00 56.86 O
ATOM 9 C3' U A 334 25.590 130.297 26.384 1.00 55.19 C
ATOM 10 O3' U A 334 26.401 129.135 26.262 1.00 54.16 O
ATOM 11 C2' U A 334 24.143 129.951 26.682 1.00 56.67 C
ATOM 12 O2' U A 334 24.060 128.871 27.593 1.00 57.39 O
ATOM 13 C1' U A 334 23.667 131.225 27.390 1.00 58.06 C
ATOM 14 N1 U A 334 23.102 132.235 26.478 1.00 60.74 N
ATOM 15 C2 U A 334 21.827 132.018 25.964 1.00 61.78 C
ATOM 16 O2 U A 334 21.158 131.033 26.239 1.00 62.28 O
ATOM 17 N3 U A 334 21.370 132.997 25.111 1.00 62.30 N
ATOM 18 C4 U A 334 22.036 134.139 24.724 1.00 63.13 C
ATOM 19 O4 U A 334 21.463 134.956 24.000 1.00 63.46 O
ATOM 20 C5 U A 334 23.342 134.293 25.294 1.00 63.74 C
ATOM 21 C6 U A 334 23.816 133.367 26.134 1.00 62.11 C
ATOM 22 P A A 335 26.975 128.713 24.824 1.00 54.67 P
ATOM 23 OP1 A A 335 27.952 127.615 25.007 1.00 54.92 O
ATOM 24 OP2 A A 335 27.409 129.980 24.169 1.00 53.69 O
ATOM 25 O5' A A 335 25.701 128.119 24.070 1.00 56.57 O
TER
ATOM 1 O3' U B 316 19.173 124.741 21.770 1.00 55.24 O
ATOM 2 P A B 317 18.821 124.563 23.316 1.00 55.02 P
ATOM 3 OP1 A B 317 19.759 123.548 23.853 1.00 51.84 O
ATOM 4 OP2 A B 317 17.358 124.317 23.368 1.00 54.24 O
ATOM 5 O5' A B 317 19.117 125.993 23.968 1.00 53.97 O
ATOM 6 C5' A B 317 20.279 126.232 24.781 1.00 53.71 C
ATOM 7 C4' A B 317 20.237 127.633 25.347 1.00 53.88 C
ATOM 8 O4' A B 317 20.080 128.575 24.242 1.00 53.96 O
ATOM 9 C3' A B 317 19.088 127.915 26.316 1.00 54.17 C
ATOM 10 O3' A B 317 19.496 128.886 27.313 1.00 55.06 O
ATOM 11 C2' A B 317 18.051 128.528 25.374 1.00 54.17 C
ATOM 12 O2' A B 317 17.059 129.320 25.988 1.00 54.58 O
ATOM 13 C1' A B 317 18.947 129.377 24.476 1.00 55.02 C
ATOM 14 N9 A B 317 18.399 129.828 23.191 1.00 57.19 N
ATOM 15 C8 A B 317 17.679 129.115 22.256 1.00 58.13 C
ATOM 16 N7 A B 317 17.350 129.814 21.196 1.00 58.34 N
ATOM 17 C5 A B 317 17.886 131.069 21.444 1.00 57.56 C
ATOM 18 C6 A B 317 17.899 132.257 20.692 1.00 57.28 C
ATOM 19 N6 A B 317 17.360 132.385 19.478 1.00 55.55 N
ATOM 20 N1 A B 317 18.509 133.332 21.234 1.00 57.71 N
ATOM 21 C2 A B 317 19.082 133.214 22.440 1.00 58.25 C
ATOM 22 N3 A B 317 19.151 132.152 23.235 1.00 57.88 N
ATOM 23 C4 A B 317 18.527 131.097 22.673 1.00 57.86 C
ATOM 24 P C B 318 20.319 128.428 28.636 1.00 53.87 P
ATOM 25 OP1 C B 318 20.370 129.631 29.493 1.00 54.03 O
ATOM 26 OP2 C B 318 21.589 127.721 28.262 1.00 51.34 O
ATOM 27 O5' C B 318 19.373 127.400 29.407 1.00 54.11 O
TER
Atoms:
C4: (22.036,134.139,24.724)
N3: (21.370,132.997,25.111)
OP1: (29.254,133.272,26.023)
OP2: (27.596,134.517,24.511)
C2: (21.827,132.018,25.964)
C1': (23.667,131.225,27.390)
C3': (25.590,130.297,26.384)
O5': (26.855,132.896,26.294)
O4': (24.791,131.791,28.025)
C5': (27.111,132.044,27.431)
P: (27.946,133.962,25.844)
C4': (25.982,131.074,27.623)
C2': (24.143,129.951,26.682)
O2': (24.060,128.871,27.593)
N1: (23.102,132.235,26.478)
O4: (21.463,134.956,24.000)
O2: (21.158,131.033,26.239)
C6: (23.816,133.367,26.134)
C5: (23.342,134.293,25.294)
O3': (26.401,129.135,26.262)
N3: (21.370,132.997,25.111)
OP1: (29.254,133.272,26.023)
OP2: (27.596,134.517,24.511)
C2: (21.827,132.018,25.964)
C1': (23.667,131.225,27.390)
C3': (25.590,130.297,26.384)
O5': (26.855,132.896,26.294)
O4': (24.791,131.791,28.025)
C5': (27.111,132.044,27.431)
P: (27.946,133.962,25.844)
C4': (25.982,131.074,27.623)
C2': (24.143,129.951,26.682)
O2': (24.060,128.871,27.593)
N1: (23.102,132.235,26.478)
O4: (21.463,134.956,24.000)
O2: (21.158,131.033,26.239)
C6: (23.816,133.367,26.134)
C5: (23.342,134.293,25.294)
O3': (26.401,129.135,26.262)
OP1: (19.759,123.548,23.853)
OP2: (17.358,124.317,23.368)
C3': (19.088,127.915,26.316)
C1': (18.947,129.377,24.476)
C5': (20.279,126.232,24.781)
O4': (20.080,128.575,24.242)
C8: (17.679,129.115,22.256)
O2': (17.059,129.320,25.988)
C6: (17.899,132.257,20.692)
C5: (17.886,131.069,21.444)
C4: (18.527,131.097,22.673)
P: (18.821,124.563,23.316)
C4': (20.237,127.633,25.347)
C2': (18.051,128.528,25.374)
C2: (19.082,133.214,22.440)
N1: (18.509,133.332,21.234)
N3: (19.151,132.152,23.235)
N6: (17.360,132.385,19.478)
N7: (17.350,129.814,21.196)
N9: (18.399,129.828,23.191)
O5': (19.117,125.993,23.968)
O3': (19.496,128.886,27.313)
OP2: (17.358,124.317,23.368)
C3': (19.088,127.915,26.316)
C1': (18.947,129.377,24.476)
C5': (20.279,126.232,24.781)
O4': (20.080,128.575,24.242)
C8: (17.679,129.115,22.256)
O2': (17.059,129.320,25.988)
C6: (17.899,132.257,20.692)
C5: (17.886,131.069,21.444)
C4: (18.527,131.097,22.673)
P: (18.821,124.563,23.316)
C4': (20.237,127.633,25.347)
C2': (18.051,128.528,25.374)
C2: (19.082,133.214,22.440)
N1: (18.509,133.332,21.234)
N3: (19.151,132.152,23.235)
N6: (17.360,132.385,19.478)
N7: (17.350,129.814,21.196)
N9: (18.399,129.828,23.191)
O5': (19.117,125.993,23.968)
O3': (19.496,128.886,27.313)
Image (generated by PyMOL):