ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1N8R:A334:A317

Extra

PDB:
ATOM 1 O3' G A 333 27.791 135.614 26.843 1.00 33.56 O
ATOM 2 P U A 334 27.855 134.428 25.756 1.00 35.43 P
ATOM 3 OP1 U A 334 29.189 133.813 25.916 1.00 33.88 O
ATOM 4 OP2 U A 334 27.442 134.900 24.422 1.00 34.24 O
ATOM 5 O5' U A 334 26.780 133.373 26.259 1.00 35.15 O
ATOM 6 C5' U A 334 27.087 132.485 27.341 1.00 34.67 C
ATOM 7 C4' U A 334 25.967 131.500 27.537 1.00 35.44 C
ATOM 8 O4' U A 334 24.778 132.208 27.971 1.00 37.43 O
ATOM 9 C3' U A 334 25.544 130.726 26.301 1.00 34.50 C
ATOM 10 O3' U A 334 26.353 129.562 26.157 1.00 32.90 O
ATOM 11 C2' U A 334 24.105 130.371 26.633 1.00 37.06 C
ATOM 12 O2' U A 334 24.040 129.291 27.531 1.00 38.03 O
ATOM 13 C1' U A 334 23.634 131.634 27.362 1.00 39.76 C
ATOM 14 N1 U A 334 23.033 132.649 26.478 1.00 44.69 N
ATOM 15 C2 U A 334 21.778 132.397 25.935 1.00 46.44 C
ATOM 16 O2 U A 334 21.132 131.391 26.191 1.00 47.60 O
ATOM 17 N3 U A 334 21.307 133.372 25.085 1.00 47.55 N
ATOM 18 C4 U A 334 21.941 134.557 24.743 1.00 48.21 C
ATOM 19 O4 U A 334 21.387 135.348 23.974 1.00 49.63 O
ATOM 20 C5 U A 334 23.217 134.749 25.361 1.00 47.65 C
ATOM 21 C6 U A 334 23.706 133.818 26.182 1.00 46.36 C
ATOM 22 P A A 335 26.846 129.096 24.698 1.00 33.06 P
ATOM 23 OP1 A A 335 27.859 128.035 24.850 1.00 31.93 O
ATOM 24 OP2 A A 335 27.176 130.308 23.929 1.00 33.54 O
ATOM 25 O5' A A 335 25.555 128.455 24.024 1.00 35.49 O
TER

ATOM 1 O3' U B 316 19.121 124.989 21.842 1.00 45.21 O
ATOM 2 P A B 317 18.753 124.885 23.407 1.00 45.01 P
ATOM 3 OP1 A B 317 19.707 123.894 24.001 1.00 43.45 O
ATOM 4 OP2 A B 317 17.276 124.641 23.486 1.00 44.14 O
ATOM 5 O5' A B 317 19.017 126.350 23.995 1.00 43.02 O
ATOM 6 C5' A B 317 20.156 126.626 24.828 1.00 41.27 C
ATOM 7 C4' A B 317 20.072 128.023 25.391 1.00 40.73 C
ATOM 8 O4' A B 317 19.886 128.958 24.293 1.00 41.35 O
ATOM 9 C3' A B 317 18.925 128.293 26.355 1.00 40.18 C
ATOM 10 O3' A B 317 19.329 129.292 27.298 1.00 39.21 O
ATOM 11 C2' A B 317 17.871 128.905 25.436 1.00 41.26 C
ATOM 12 O2' A B 317 16.935 129.701 26.125 1.00 41.09 O
ATOM 13 C1' A B 317 18.753 129.762 24.538 1.00 41.53 C
ATOM 14 N9 A B 317 18.214 130.203 23.250 1.00 42.17 N
ATOM 15 C8 A B 317 17.524 129.478 22.309 1.00 43.06 C
ATOM 16 N7 A B 317 17.264 130.147 21.212 1.00 42.30 N
ATOM 17 C5 A B 317 17.803 131.404 21.452 1.00 42.31 C
ATOM 18 C6 A B 317 17.892 132.567 20.659 1.00 42.09 C
ATOM 19 N6 A B 317 17.466 132.643 19.397 1.00 41.62 N
ATOM 20 N1 A B 317 18.469 133.654 21.209 1.00 44.04 N
ATOM 21 C2 A B 317 18.950 133.563 22.458 1.00 43.11 C
ATOM 22 N3 A B 317 18.952 132.524 23.290 1.00 42.94 N
ATOM 23 C4 A B 317 18.360 131.462 22.718 1.00 42.39 C
ATOM 24 P C B 318 20.153 128.881 28.616 1.00 39.00 P
ATOM 25 OP1 C B 318 20.266 130.108 29.433 1.00 36.78 O
ATOM 26 OP2 C B 318 21.385 128.157 28.185 1.00 37.74 O
ATOM 27 O5' C B 318 19.231 127.853 29.409 1.00 36.76 O
TER

Atoms:
C4: (21.941,134.557,24.743)
N3: (21.307,133.372,25.085)
OP1: (29.189,133.813,25.916)
OP2: (27.442,134.900,24.422)
C2: (21.778,132.397,25.935)
C1': (23.634,131.634,27.362)
C3': (25.544,130.726,26.301)
O5': (26.780,133.373,26.259)
O4': (24.778,132.208,27.971)
C5': (27.087,132.485,27.341)
P: (27.855,134.428,25.756)
C4': (25.967,131.500,27.537)
C2': (24.105,130.371,26.633)
O2': (24.040,129.291,27.531)
N1: (23.033,132.649,26.478)
O4: (21.387,135.348,23.974)
O2: (21.132,131.391,26.191)
C6: (23.706,133.818,26.182)
C5: (23.217,134.749,25.361)
O3': (26.353,129.562,26.157)
OP1: (19.707,123.894,24.001)
OP2: (17.276,124.641,23.486)
C3': (18.925,128.293,26.355)
C1': (18.753,129.762,24.538)
C5': (20.156,126.626,24.828)
O4': (19.886,128.958,24.293)
C8: (17.524,129.478,22.309)
O2': (16.935,129.701,26.125)
C6: (17.892,132.567,20.659)
C5: (17.803,131.404,21.452)
C4: (18.360,131.462,22.718)
P: (18.753,124.885,23.407)
C4': (20.072,128.023,25.391)
C2': (17.871,128.905,25.436)
C2: (18.950,133.563,22.458)
N1: (18.469,133.654,21.209)
N3: (18.952,132.524,23.290)
N6: (17.466,132.643,19.397)
N7: (17.264,130.147,21.212)
N9: (18.214,130.203,23.250)
O5': (19.017,126.350,23.995)
O3': (19.329,129.292,27.298)
Image (generated by PyMOL):
PyMOL image
show in jmol