ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Q81:A334:A317

Extra

PDB:
ATOM 1 O3' G A 333 28.275 134.562 27.077 1.00 48.12 O
ATOM 2 P U A 334 28.333 133.402 25.960 1.00 46.19 P
ATOM 3 OP1 U A 334 29.639 132.736 26.066 1.00 46.61 O
ATOM 4 OP2 U A 334 27.922 133.964 24.667 1.00 47.66 O
ATOM 5 O5' U A 334 27.230 132.360 26.432 1.00 48.62 O
ATOM 6 C5' U A 334 27.453 131.497 27.566 1.00 48.13 C
ATOM 7 C4' U A 334 26.297 130.545 27.725 1.00 48.50 C
ATOM 8 O4' U A 334 25.107 131.304 28.038 1.00 48.95 O
ATOM 9 C3' U A 334 25.938 129.767 26.473 1.00 49.01 C
ATOM 10 O3' U A 334 26.737 128.603 26.348 1.00 50.62 O
ATOM 11 C2' U A 334 24.467 129.455 26.685 1.00 49.55 C
ATOM 12 O2' U A 334 24.236 128.345 27.527 1.00 47.37 O
ATOM 13 C1' U A 334 23.995 130.741 27.368 1.00 51.25 C
ATOM 14 N1 U A 334 23.473 131.741 26.422 1.00 55.03 N
ATOM 15 C2 U A 334 22.177 131.576 25.965 1.00 56.79 C
ATOM 16 O2 U A 334 21.469 130.646 26.309 1.00 58.28 O
ATOM 17 N3 U A 334 21.738 132.542 25.091 1.00 57.49 N
ATOM 18 C4 U A 334 22.446 133.632 24.634 1.00 57.52 C
ATOM 19 O4 U A 334 21.900 134.432 23.869 1.00 56.72 O
ATOM 20 C5 U A 334 23.782 133.731 25.147 1.00 57.57 C
ATOM 21 C6 U A 334 24.237 132.807 26.002 1.00 55.83 C
ATOM 22 P A A 335 27.316 128.189 24.914 1.00 53.02 P
ATOM 23 OP1 A A 335 28.250 127.066 25.150 1.00 52.83 O
ATOM 24 OP2 A A 335 27.792 129.422 24.228 1.00 53.01 O
ATOM 25 O5' A A 335 26.051 127.618 24.130 1.00 55.97 O
TER

ATOM 1 O3' U B 316 19.609 124.183 21.881 1.00 60.88 O
ATOM 2 P A B 317 19.167 124.049 23.421 1.00 58.79 P
ATOM 3 OP1 A B 317 20.119 123.082 24.021 1.00 58.55 O
ATOM 4 OP2 A B 317 17.713 123.770 23.474 1.00 58.15 O
ATOM 5 O5' A B 317 19.409 125.500 24.039 1.00 57.33 O
ATOM 6 C5' A B 317 20.604 125.794 24.795 1.00 55.96 C
ATOM 7 C4' A B 317 20.509 127.168 25.414 1.00 54.26 C
ATOM 8 O4' A B 317 20.428 128.145 24.343 1.00 55.47 O
ATOM 9 C3' A B 317 19.303 127.427 26.315 1.00 53.80 C
ATOM 10 O3' A B 317 19.622 128.421 27.304 1.00 53.79 O
ATOM 11 C2' A B 317 18.317 128.056 25.337 1.00 54.11 C
ATOM 12 O2' A B 317 17.348 128.879 25.943 1.00 53.29 O
ATOM 13 C1' A B 317 19.256 128.908 24.497 1.00 54.36 C
ATOM 14 N9 A B 317 18.760 129.284 23.177 1.00 55.92 N
ATOM 15 C8 A B 317 18.049 128.558 22.247 1.00 56.05 C
ATOM 16 N7 A B 317 17.740 129.242 21.171 1.00 56.74 N
ATOM 17 C5 A B 317 18.289 130.499 21.407 1.00 57.31 C
ATOM 18 C6 A B 317 18.302 131.690 20.655 1.00 57.35 C
ATOM 19 N6 A B 317 17.697 131.837 19.471 1.00 56.89 N
ATOM 20 N1 A B 317 18.961 132.751 21.176 1.00 58.15 N
ATOM 21 C2 A B 317 19.544 132.623 22.379 1.00 57.14 C
ATOM 22 N3 A B 317 19.584 131.571 23.182 1.00 56.52 N
ATOM 23 C4 A B 317 18.933 130.530 22.631 1.00 56.59 C
ATOM 24 P C B 318 20.423 128.022 28.649 1.00 51.01 P
ATOM 25 OP1 C B 318 20.451 129.244 29.479 1.00 51.15 O
ATOM 26 OP2 C B 318 21.692 127.358 28.287 1.00 48.74 O
ATOM 27 O5' C B 318 19.514 126.941 29.378 1.00 52.20 O
TER

Atoms:
C4: (22.446,133.632,24.634)
N3: (21.738,132.542,25.091)
OP1: (29.639,132.736,26.066)
OP2: (27.922,133.964,24.667)
C2: (22.177,131.576,25.965)
C1': (23.995,130.741,27.368)
C3': (25.938,129.767,26.473)
O5': (27.230,132.360,26.432)
O4': (25.107,131.304,28.038)
C5': (27.453,131.497,27.566)
P: (28.333,133.402,25.960)
C4': (26.297,130.545,27.725)
C2': (24.467,129.455,26.685)
O2': (24.236,128.345,27.527)
N1: (23.473,131.741,26.422)
O4: (21.900,134.432,23.869)
O2: (21.469,130.646,26.309)
C6: (24.237,132.807,26.002)
C5: (23.782,133.731,25.147)
O3': (26.737,128.603,26.348)
OP1: (20.119,123.082,24.021)
OP2: (17.713,123.770,23.474)
C3': (19.303,127.427,26.315)
C1': (19.256,128.908,24.497)
C5': (20.604,125.794,24.795)
O4': (20.428,128.145,24.343)
C8: (18.049,128.558,22.247)
O2': (17.348,128.879,25.943)
C6: (18.302,131.690,20.655)
C5: (18.289,130.499,21.407)
C4: (18.933,130.530,22.631)
P: (19.167,124.049,23.421)
C4': (20.509,127.168,25.414)
C2': (18.317,128.056,25.337)
C2: (19.544,132.623,22.379)
N1: (18.961,132.751,21.176)
N3: (19.584,131.571,23.182)
N6: (17.697,131.837,19.471)
N7: (17.740,129.242,21.171)
N9: (18.760,129.284,23.177)
O5': (19.409,125.500,24.039)
O3': (19.622,128.421,27.304)
Image (generated by PyMOL):
PyMOL image
show in jmol