ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ4:0334:0317

Extra

PDB:
ATOM 1 O3' G A 333 27.862 135.651 26.765 1.00 52.67 O
ATOM 2 P U A 334 27.905 134.323 25.863 1.00 55.11 P
ATOM 3 OP1 U A 334 29.225 133.679 26.085 1.00 55.68 O
ATOM 4 OP2 U A 334 27.494 134.675 24.480 1.00 57.03 O
ATOM 5 O5' U A 334 26.774 133.386 26.483 1.00 55.95 O
ATOM 6 C5' U A 334 27.069 132.464 27.549 1.00 54.71 C
ATOM 7 C4' U A 334 25.938 131.482 27.708 1.00 55.61 C
ATOM 8 O4' U A 334 24.730 132.187 28.101 1.00 56.38 O
ATOM 9 C3' U A 334 25.552 130.744 26.439 1.00 55.44 C
ATOM 10 O3' U A 334 26.391 129.614 26.240 1.00 55.32 O
ATOM 11 C2' U A 334 24.107 130.366 26.726 1.00 56.99 C
ATOM 12 O2' U A 334 24.012 129.280 27.625 1.00 57.58 O
ATOM 13 C1' U A 334 23.611 131.621 27.443 1.00 57.41 C
ATOM 14 N1 U A 334 23.054 132.638 26.534 1.00 60.92 N
ATOM 15 C2 U A 334 21.769 132.449 26.053 1.00 61.03 C
ATOM 16 O2 U A 334 21.092 131.477 26.334 1.00 61.79 O
ATOM 17 N3 U A 334 21.305 133.444 25.226 1.00 62.15 N
ATOM 18 C4 U A 334 21.980 134.584 24.833 1.00 63.15 C
ATOM 19 O4 U A 334 21.427 135.395 24.082 1.00 62.19 O
ATOM 20 C5 U A 334 23.304 134.701 25.366 1.00 63.48 C
ATOM 21 C6 U A 334 23.783 133.752 26.173 1.00 61.90 C
ATOM 22 P A A 335 26.925 129.267 24.767 1.00 56.17 P
ATOM 23 OP1 A A 335 27.972 128.218 24.877 1.00 54.87 O
ATOM 24 OP2 A A 335 27.244 130.550 24.092 1.00 57.61 O
ATOM 25 O5' A A 335 25.659 128.624 24.045 1.00 58.80 O
TER

ATOM 1 O3' U B 316 19.150 125.078 21.802 1.00 61.22 O
ATOM 2 P A B 317 18.674 124.996 23.337 1.00 59.92 P
ATOM 3 OP1 A B 317 19.532 123.975 23.990 1.00 59.61 O
ATOM 4 OP2 A B 317 17.195 124.836 23.356 1.00 59.06 O
ATOM 5 O5' A B 317 18.986 126.436 23.951 1.00 59.62 O
ATOM 6 C5' A B 317 20.130 126.657 24.798 1.00 57.29 C
ATOM 7 C4' A B 317 20.092 128.045 25.393 1.00 55.83 C
ATOM 8 O4' A B 317 19.982 129.009 24.312 1.00 56.63 O
ATOM 9 C3' A B 317 18.940 128.355 26.348 1.00 55.94 C
ATOM 10 O3' A B 317 19.350 129.366 27.288 1.00 56.71 O
ATOM 11 C2' A B 317 17.929 129.007 25.416 1.00 56.39 C
ATOM 12 O2' A B 317 17.024 129.854 26.088 1.00 56.06 O
ATOM 13 C1' A B 317 18.861 129.832 24.537 1.00 57.97 C
ATOM 14 N9 A B 317 18.336 130.279 23.247 1.00 61.94 N
ATOM 15 C8 A B 317 17.578 129.597 22.324 1.00 62.06 C
ATOM 16 N7 A B 317 17.267 130.307 21.269 1.00 63.40 N
ATOM 17 C5 A B 317 17.864 131.539 21.507 1.00 64.55 C
ATOM 18 C6 A B 317 17.910 132.735 20.763 1.00 63.90 C
ATOM 19 N6 A B 317 17.320 132.897 19.579 1.00 62.53 N
ATOM 20 N1 A B 317 18.594 133.774 21.288 1.00 64.94 N
ATOM 21 C2 A B 317 19.188 133.618 22.477 1.00 64.84 C
ATOM 22 N3 A B 317 19.215 132.552 23.270 1.00 65.21 N
ATOM 23 C4 A B 317 18.527 131.534 22.721 1.00 64.50 C
ATOM 24 P C B 318 20.218 128.977 28.593 1.00 54.81 P
ATOM 25 OP1 C B 318 20.202 130.180 29.460 1.00 53.68 O
ATOM 26 OP2 C B 318 21.521 128.386 28.171 1.00 50.02 O
ATOM 27 O5' C B 318 19.362 127.851 29.327 1.00 54.12 O
TER

Atoms:
C4: (21.980,134.584,24.833)
N3: (21.305,133.444,25.226)
OP1: (29.225,133.679,26.085)
OP2: (27.494,134.675,24.480)
C2: (21.769,132.449,26.053)
C1': (23.611,131.621,27.443)
C3': (25.552,130.744,26.439)
O5': (26.774,133.386,26.483)
O4': (24.730,132.187,28.101)
C5': (27.069,132.464,27.549)
P: (27.905,134.323,25.863)
C4': (25.938,131.482,27.708)
C2': (24.107,130.366,26.726)
O2': (24.012,129.280,27.625)
N1: (23.054,132.638,26.534)
O4: (21.427,135.395,24.082)
O2: (21.092,131.477,26.334)
C6: (23.783,133.752,26.173)
C5: (23.304,134.701,25.366)
O3': (26.391,129.614,26.240)
OP1: (19.532,123.975,23.990)
OP2: (17.195,124.836,23.356)
C3': (18.940,128.355,26.348)
C1': (18.861,129.832,24.537)
C5': (20.130,126.657,24.798)
O4': (19.982,129.009,24.312)
C8: (17.578,129.597,22.324)
O2': (17.024,129.854,26.088)
C6: (17.910,132.735,20.763)
C5: (17.864,131.539,21.507)
C4: (18.527,131.534,22.721)
P: (18.674,124.996,23.337)
C4': (20.092,128.045,25.393)
C2': (17.929,129.007,25.416)
C2: (19.188,133.618,22.477)
N1: (18.594,133.774,21.288)
N3: (19.215,132.552,23.270)
N6: (17.320,132.897,19.579)
N7: (17.267,130.307,21.269)
N9: (18.336,130.279,23.247)
O5': (18.986,126.436,23.951)
O3': (19.350,129.366,27.288)
Image (generated by PyMOL):
PyMOL image
show in jmol