ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:02009:02029

Extra

PDB:
ATOM 1 O3' A A2008 34.328 131.916 103.934 1.00 37.80 O
ATOM 2 P U A2009 34.379 133.421 104.473 1.00 35.67 P
ATOM 3 OP1 U A2009 33.023 133.727 104.975 1.00 38.02 O
ATOM 4 OP2 U A2009 34.989 134.291 103.444 1.00 38.45 O
ATOM 5 O5' U A2009 35.341 133.292 105.732 1.00 38.83 O
ATOM 6 C5' U A2009 36.375 134.244 106.015 1.00 36.87 C
ATOM 7 C4' U A2009 36.685 134.225 107.493 1.00 36.43 C
ATOM 8 O4' U A2009 35.523 134.724 108.204 1.00 38.03 O
ATOM 9 C3' U A2009 36.902 132.844 108.097 1.00 35.18 C
ATOM 10 O3' U A2009 38.210 132.327 107.896 1.00 35.14 O
ATOM 11 C2' U A2009 36.562 133.074 109.563 1.00 34.27 C
ATOM 12 O2' U A2009 37.555 133.732 110.301 1.00 31.31 O
ATOM 13 C1' U A2009 35.384 134.035 109.442 1.00 37.99 C
ATOM 14 N1 U A2009 34.077 133.355 109.486 1.00 40.39 N
ATOM 15 C2 U A2009 33.576 133.022 110.737 1.00 41.06 C
ATOM 16 O2 U A2009 34.164 133.260 111.772 1.00 42.27 O
ATOM 17 N3 U A2009 32.356 132.396 110.729 1.00 45.14 N
ATOM 18 C4 U A2009 31.593 132.075 109.628 1.00 44.10 C
ATOM 19 O4 U A2009 30.506 131.517 109.793 1.00 46.30 O
ATOM 20 C5 U A2009 32.177 132.442 108.368 1.00 41.72 C
ATOM 21 C6 U A2009 33.368 133.054 108.340 1.00 38.85 C
ATOM 22 P U A2010 38.403 130.981 107.038 1.00 35.97 P
ATOM 23 OP1 U A2010 38.860 131.401 105.700 1.00 39.32 O
ATOM 24 OP2 U A2010 37.184 130.151 107.162 1.00 39.80 O
ATOM 25 O5' U A2010 39.539 130.150 107.790 1.00 36.77 O
TER

ATOM 1 O3' G B2028 34.208 132.799 120.587 1.00 40.15 O
ATOM 2 P A B2029 33.090 133.920 120.329 1.00 41.43 P
ATOM 3 OP1 A B2029 33.563 135.221 120.834 1.00 41.68 O
ATOM 4 OP2 A B2029 31.815 133.358 120.835 1.00 44.39 O
ATOM 5 O5' A B2029 33.006 134.017 118.740 1.00 40.65 O
ATOM 6 C5' A B2029 34.045 134.654 117.975 1.00 36.96 C
ATOM 7 C4' A B2029 33.667 134.699 116.508 1.00 37.94 C
ATOM 8 O4' A B2029 33.649 133.356 115.952 1.00 35.98 O
ATOM 9 C3' A B2029 32.275 135.236 116.202 1.00 38.81 C
ATOM 10 O3' A B2029 32.243 136.653 116.194 1.00 40.47 O
ATOM 11 C2' A B2029 32.013 134.665 114.819 1.00 39.27 C
ATOM 12 O2' A B2029 32.670 135.403 113.809 1.00 38.26 O
ATOM 13 C1' A B2029 32.643 133.274 114.949 1.00 38.64 C
ATOM 14 N9 A B2029 31.655 132.275 115.355 1.00 39.61 N
ATOM 15 C8 A B2029 31.339 131.863 116.629 1.00 40.25 C
ATOM 16 N7 A B2029 30.384 130.969 116.674 1.00 38.58 N
ATOM 17 C5 A B2029 30.051 130.772 115.342 1.00 40.17 C
ATOM 18 C6 A B2029 29.106 129.950 114.723 1.00 40.11 C
ATOM 19 N6 A B2029 28.287 129.145 115.394 1.00 43.52 N
ATOM 20 N1 A B2029 29.026 129.983 113.375 1.00 39.09 N
ATOM 21 C2 A B2029 29.845 130.793 112.708 1.00 39.25 C
ATOM 22 N3 A B2029 30.774 131.618 113.174 1.00 40.71 N
ATOM 23 C4 A B2029 30.829 131.562 114.518 1.00 40.96 C
ATOM 24 P C B2030 31.003 137.430 116.860 1.00 43.82 P
ATOM 25 OP1 C B2030 31.587 138.576 117.609 1.00 43.32 O
ATOM 26 OP2 C B2030 30.122 136.455 117.563 1.00 42.82 O
ATOM 27 O5' C B2030 30.205 138.035 115.621 1.00 41.14 O
TER

Atoms:
C4: (31.593,132.075,109.628)
N3: (32.356,132.396,110.729)
OP1: (33.023,133.727,104.975)
OP2: (34.989,134.291,103.444)
C2: (33.576,133.022,110.737)
C1': (35.384,134.035,109.442)
C3': (36.902,132.844,108.097)
O5': (35.341,133.292,105.732)
O4': (35.523,134.724,108.204)
C5': (36.375,134.244,106.015)
P: (34.379,133.421,104.473)
C4': (36.685,134.225,107.493)
C2': (36.562,133.074,109.563)
O2': (37.555,133.732,110.301)
N1: (34.077,133.355,109.486)
O4: (30.506,131.517,109.793)
O2: (34.164,133.260,111.772)
C6: (33.368,133.054,108.340)
C5: (32.177,132.442,108.368)
O3': (38.210,132.327,107.896)
OP1: (33.563,135.221,120.834)
OP2: (31.815,133.358,120.835)
C3': (32.275,135.236,116.202)
C1': (32.643,133.274,114.949)
C5': (34.045,134.654,117.975)
O4': (33.649,133.356,115.952)
C8: (31.339,131.863,116.629)
O2': (32.670,135.403,113.809)
C6: (29.106,129.950,114.723)
C5: (30.051,130.772,115.342)
C4: (30.829,131.562,114.518)
P: (33.090,133.920,120.329)
C4': (33.667,134.699,116.508)
C2': (32.013,134.665,114.819)
C2: (29.845,130.793,112.708)
N1: (29.026,129.983,113.375)
N3: (30.774,131.618,113.174)
N6: (28.287,129.145,115.394)
N7: (30.384,130.969,116.674)
N9: (31.655,132.275,115.355)
O5': (33.006,134.017,118.740)
O3': (32.243,136.653,116.194)
Image (generated by PyMOL):
PyMOL image
show in jmol