ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQO:0827:02001

Extra

PDB:
ATOM 1 O3' C A 826 63.233 143.530 91.050 1.00 34.78 O
ATOM 2 P U A 827 61.689 143.946 91.247 1.00 34.19 P
ATOM 3 OP1 U A 827 61.520 144.734 92.491 1.00 37.67 O
ATOM 4 OP2 U A 827 60.896 142.716 91.050 1.00 38.20 O
ATOM 5 O5' U A 827 61.389 144.917 90.021 1.00 34.02 O
ATOM 6 C5' U A 827 61.631 144.506 88.658 1.00 31.69 C
ATOM 7 C4' U A 827 60.409 144.781 87.810 1.00 33.97 C
ATOM 8 O4' U A 827 59.384 143.802 88.104 1.00 35.67 O
ATOM 9 C3' U A 827 59.735 146.129 88.031 1.00 32.28 C
ATOM 10 O3' U A 827 60.366 147.102 87.209 1.00 31.22 O
ATOM 11 C2' U A 827 58.299 145.876 87.588 1.00 35.54 C
ATOM 12 O2' U A 827 58.124 146.074 86.206 1.00 38.93 O
ATOM 13 C1' U A 827 58.111 144.389 87.919 1.00 36.15 C
ATOM 14 N1 U A 827 57.261 144.067 89.077 1.00 36.84 N
ATOM 15 C2 U A 827 55.900 144.327 88.980 1.00 36.76 C
ATOM 16 O2 U A 827 55.386 144.828 88.000 1.00 36.41 O
ATOM 17 N3 U A 827 55.164 143.975 90.081 1.00 37.60 N
ATOM 18 C4 U A 827 55.631 143.418 91.248 1.00 38.40 C
ATOM 19 O4 U A 827 54.837 143.155 92.155 1.00 39.98 O
ATOM 20 C5 U A 827 57.042 143.198 91.278 1.00 38.48 C
ATOM 21 C6 U A 827 57.790 143.518 90.220 1.00 36.44 C
ATOM 22 P A A 828 59.897 148.641 87.250 1.00 32.83 P
ATOM 23 OP1 A A 828 58.838 148.844 88.268 1.00 32.51 O
ATOM 24 OP2 A A 828 59.644 149.057 85.848 1.00 32.40 O
ATOM 25 O5' A A 828 61.210 149.386 87.757 1.00 34.18 O
TER

ATOM 1 O3' A B2000 48.999 147.320 83.468 1.00 34.24 O
ATOM 2 P A B2001 48.348 145.865 83.688 1.00 33.20 P
ATOM 3 OP1 A B2001 48.085 145.357 82.318 1.00 38.36 O
ATOM 4 OP2 A B2001 47.235 145.947 84.656 1.00 32.73 O
ATOM 5 O5' A B2001 49.524 145.010 84.341 1.00 31.25 O
ATOM 6 C5' A B2001 50.811 144.923 83.696 1.00 36.54 C
ATOM 7 C4' A B2001 51.869 144.442 84.666 1.00 35.51 C
ATOM 8 O4' A B2001 51.981 145.361 85.783 1.00 35.98 O
ATOM 9 C3' A B2001 51.603 143.094 85.310 1.00 35.52 C
ATOM 10 O3' A B2001 52.040 142.060 84.444 1.00 37.50 O
ATOM 11 C2' A B2001 52.453 143.171 86.571 1.00 35.69 C
ATOM 12 O2' A B2001 53.830 142.947 86.315 1.00 37.49 O
ATOM 13 C1' A B2001 52.252 144.633 86.974 1.00 34.77 C
ATOM 14 N9 A B2001 51.119 144.825 87.880 1.00 35.33 N
ATOM 15 C8 A B2001 49.847 145.201 87.529 1.00 32.53 C
ATOM 16 N7 A B2001 49.038 145.329 88.544 1.00 32.42 N
ATOM 17 C5 A B2001 49.820 145.006 89.640 1.00 32.51 C
ATOM 18 C6 A B2001 49.538 144.956 91.010 1.00 34.23 C
ATOM 19 N6 A B2001 48.340 145.246 91.525 1.00 37.21 N
ATOM 20 N1 A B2001 50.537 144.596 91.847 1.00 33.46 N
ATOM 21 C2 A B2001 51.731 144.310 91.324 1.00 32.90 C
ATOM 22 N3 A B2001 52.118 144.325 90.049 1.00 32.96 N
ATOM 23 C4 A B2001 51.103 144.686 89.249 1.00 32.58 C
ATOM 24 P C B2002 51.353 140.610 84.504 1.00 35.82 P
ATOM 25 OP1 C B2002 51.999 139.852 83.395 1.00 39.21 O
ATOM 26 OP2 C B2002 49.893 140.759 84.530 1.00 35.54 O
ATOM 27 O5' C B2002 51.833 139.999 85.896 1.00 37.64 O
TER

Atoms:
C4: (55.631,143.418,91.248)
N3: (55.164,143.975,90.081)
OP1: (61.520,144.734,92.491)
OP2: (60.896,142.716,91.050)
C2: (55.900,144.327,88.980)
C1': (58.111,144.389,87.919)
C3': (59.735,146.129,88.031)
O5': (61.389,144.917,90.021)
O4': (59.384,143.802,88.104)
C5': (61.631,144.506,88.658)
P: (61.689,143.946,91.247)
C4': (60.409,144.781,87.810)
C2': (58.299,145.876,87.588)
O2': (58.124,146.074,86.206)
N1: (57.261,144.067,89.077)
O4: (54.837,143.155,92.155)
O2: (55.386,144.828,88.000)
C6: (57.790,143.518,90.220)
C5: (57.042,143.198,91.278)
O3': (60.366,147.102,87.209)
OP1: (48.085,145.357,82.318)
OP2: (47.235,145.947,84.656)
C3': (51.603,143.094,85.310)
C1': (52.252,144.633,86.974)
C5': (50.811,144.923,83.696)
O4': (51.981,145.361,85.783)
C8: (49.847,145.201,87.529)
O2': (53.830,142.947,86.315)
C6: (49.538,144.956,91.010)
C5: (49.820,145.006,89.640)
C4: (51.103,144.686,89.249)
P: (48.348,145.865,83.688)
C4': (51.869,144.442,84.666)
C2': (52.453,143.171,86.571)
C2: (51.731,144.310,91.324)
N1: (50.537,144.596,91.847)
N3: (52.118,144.325,90.049)
N6: (48.340,145.246,91.525)
N7: (49.038,145.329,88.544)
N9: (51.119,144.825,87.880)
O5': (49.524,145.010,84.341)
O3': (52.040,142.060,84.444)
Image (generated by PyMOL):
PyMOL image
show in jmol