Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y26:X36:X63
Extra
PDB:
ATOM 1 O3' U A 35 12.615 -23.126 14.595 1.00 56.48 O
ATOM 2 P U A 36 13.428 -24.055 13.572 1.00 60.05 P
ATOM 3 OP1 U A 36 12.914 -25.426 13.790 1.00 60.25 O
ATOM 4 OP2 U A 36 14.878 -23.771 13.699 1.00 59.65 O
ATOM 5 O5' U A 36 13.037 -23.581 12.097 1.00 56.98 O
ATOM 6 C5' U A 36 11.708 -23.258 11.698 1.00 56.81 C
ATOM 7 C4' U A 36 11.734 -22.775 10.257 1.00 56.62 C
ATOM 8 O4' U A 36 12.092 -21.374 10.246 1.00 54.77 O
ATOM 9 C3' U A 36 12.768 -23.446 9.345 1.00 56.17 C
ATOM 10 O3' U A 36 12.215 -23.786 8.068 1.00 59.65 O
ATOM 11 C2' U A 36 13.863 -22.392 9.212 1.00 55.41 C
ATOM 12 O2' U A 36 14.617 -22.575 8.034 1.00 55.96 O
ATOM 13 C1' U A 36 12.990 -21.143 9.173 1.00 55.40 C
ATOM 14 N1 U A 36 13.610 -19.804 9.462 1.00 55.23 N
ATOM 15 C2 U A 36 13.214 -18.711 8.727 1.00 55.35 C
ATOM 16 O2 U A 36 12.420 -18.776 7.814 1.00 56.34 O
ATOM 17 N3 U A 36 13.817 -17.524 9.072 1.00 56.94 N
ATOM 18 C4 U A 36 14.733 -17.315 10.106 1.00 56.07 C
ATOM 19 O4 U A 36 15.178 -16.184 10.320 1.00 54.44 O
ATOM 20 C5 U A 36 15.079 -18.497 10.843 1.00 55.20 C
ATOM 21 C6 U A 36 14.516 -19.659 10.511 1.00 56.44 C
ATOM 22 P C A 37 12.803 -25.086 7.352 1.00 59.70 P
ATOM 23 OP1 C A 37 12.345 -26.211 8.207 1.00 61.13 O
ATOM 24 OP2 C A 37 14.262 -24.906 7.156 1.00 58.82 O
ATOM 25 O5' C A 37 12.085 -25.158 5.931 1.00 61.13 O
TER
ATOM 1 O3' U B 62 11.197 -16.654 -0.323 1.00 57.62 O
ATOM 2 P A B 63 10.144 -15.664 0.360 1.00 59.03 P
ATOM 3 OP1 A B 63 8.794 -16.050 -0.134 1.00 58.70 O
ATOM 4 OP2 A B 63 10.599 -14.267 0.153 1.00 59.78 O
ATOM 5 O5' A B 63 10.272 -15.965 1.946 1.00 59.31 O
ATOM 6 C5' A B 63 10.013 -17.280 2.479 1.00 58.07 C
ATOM 7 C4' A B 63 10.270 -17.394 3.970 1.00 57.55 C
ATOM 8 O4' A B 63 11.704 -17.381 4.228 1.00 58.32 O
ATOM 9 C3' A B 63 9.754 -16.258 4.829 1.00 56.88 C
ATOM 10 O3' A B 63 8.388 -16.437 5.118 1.00 57.27 O
ATOM 11 C2' A B 63 10.641 -16.395 6.056 1.00 56.21 C
ATOM 12 O2' A B 63 10.352 -17.541 6.835 1.00 56.85 O
ATOM 13 C1' A B 63 11.978 -16.613 5.387 1.00 54.50 C
ATOM 14 N9 A B 63 12.765 -15.435 5.003 1.00 53.95 N
ATOM 15 C8 A B 63 12.840 -14.821 3.777 1.00 52.70 C
ATOM 16 N7 A B 63 13.682 -13.804 3.754 1.00 52.36 N
ATOM 17 C5 A B 63 14.198 -13.754 5.050 1.00 52.39 C
ATOM 18 C6 A B 63 15.147 -12.921 5.692 1.00 53.13 C
ATOM 19 N6 A B 63 15.797 -11.905 5.098 1.00 53.48 N
ATOM 20 N1 A B 63 15.417 -13.167 6.992 1.00 53.47 N
ATOM 21 C2 A B 63 14.814 -14.191 7.603 1.00 53.13 C
ATOM 22 N3 A B 63 13.926 -15.047 7.089 1.00 53.03 N
ATOM 23 C4 A B 63 13.650 -14.761 5.817 1.00 52.04 C
ATOM 24 P U B 64 7.407 -15.174 5.173 1.00 55.66 P
ATOM 25 OP1 U B 64 6.037 -15.734 5.229 1.00 55.95 O
ATOM 26 OP2 U B 64 7.723 -14.217 4.104 1.00 54.45 O
ATOM 27 O5' U B 64 7.786 -14.516 6.577 1.00 57.03 O
TER
ATOM 2 P U A 36 13.428 -24.055 13.572 1.00 60.05 P
ATOM 3 OP1 U A 36 12.914 -25.426 13.790 1.00 60.25 O
ATOM 4 OP2 U A 36 14.878 -23.771 13.699 1.00 59.65 O
ATOM 5 O5' U A 36 13.037 -23.581 12.097 1.00 56.98 O
ATOM 6 C5' U A 36 11.708 -23.258 11.698 1.00 56.81 C
ATOM 7 C4' U A 36 11.734 -22.775 10.257 1.00 56.62 C
ATOM 8 O4' U A 36 12.092 -21.374 10.246 1.00 54.77 O
ATOM 9 C3' U A 36 12.768 -23.446 9.345 1.00 56.17 C
ATOM 10 O3' U A 36 12.215 -23.786 8.068 1.00 59.65 O
ATOM 11 C2' U A 36 13.863 -22.392 9.212 1.00 55.41 C
ATOM 12 O2' U A 36 14.617 -22.575 8.034 1.00 55.96 O
ATOM 13 C1' U A 36 12.990 -21.143 9.173 1.00 55.40 C
ATOM 14 N1 U A 36 13.610 -19.804 9.462 1.00 55.23 N
ATOM 15 C2 U A 36 13.214 -18.711 8.727 1.00 55.35 C
ATOM 16 O2 U A 36 12.420 -18.776 7.814 1.00 56.34 O
ATOM 17 N3 U A 36 13.817 -17.524 9.072 1.00 56.94 N
ATOM 18 C4 U A 36 14.733 -17.315 10.106 1.00 56.07 C
ATOM 19 O4 U A 36 15.178 -16.184 10.320 1.00 54.44 O
ATOM 20 C5 U A 36 15.079 -18.497 10.843 1.00 55.20 C
ATOM 21 C6 U A 36 14.516 -19.659 10.511 1.00 56.44 C
ATOM 22 P C A 37 12.803 -25.086 7.352 1.00 59.70 P
ATOM 23 OP1 C A 37 12.345 -26.211 8.207 1.00 61.13 O
ATOM 24 OP2 C A 37 14.262 -24.906 7.156 1.00 58.82 O
ATOM 25 O5' C A 37 12.085 -25.158 5.931 1.00 61.13 O
TER
ATOM 1 O3' U B 62 11.197 -16.654 -0.323 1.00 57.62 O
ATOM 2 P A B 63 10.144 -15.664 0.360 1.00 59.03 P
ATOM 3 OP1 A B 63 8.794 -16.050 -0.134 1.00 58.70 O
ATOM 4 OP2 A B 63 10.599 -14.267 0.153 1.00 59.78 O
ATOM 5 O5' A B 63 10.272 -15.965 1.946 1.00 59.31 O
ATOM 6 C5' A B 63 10.013 -17.280 2.479 1.00 58.07 C
ATOM 7 C4' A B 63 10.270 -17.394 3.970 1.00 57.55 C
ATOM 8 O4' A B 63 11.704 -17.381 4.228 1.00 58.32 O
ATOM 9 C3' A B 63 9.754 -16.258 4.829 1.00 56.88 C
ATOM 10 O3' A B 63 8.388 -16.437 5.118 1.00 57.27 O
ATOM 11 C2' A B 63 10.641 -16.395 6.056 1.00 56.21 C
ATOM 12 O2' A B 63 10.352 -17.541 6.835 1.00 56.85 O
ATOM 13 C1' A B 63 11.978 -16.613 5.387 1.00 54.50 C
ATOM 14 N9 A B 63 12.765 -15.435 5.003 1.00 53.95 N
ATOM 15 C8 A B 63 12.840 -14.821 3.777 1.00 52.70 C
ATOM 16 N7 A B 63 13.682 -13.804 3.754 1.00 52.36 N
ATOM 17 C5 A B 63 14.198 -13.754 5.050 1.00 52.39 C
ATOM 18 C6 A B 63 15.147 -12.921 5.692 1.00 53.13 C
ATOM 19 N6 A B 63 15.797 -11.905 5.098 1.00 53.48 N
ATOM 20 N1 A B 63 15.417 -13.167 6.992 1.00 53.47 N
ATOM 21 C2 A B 63 14.814 -14.191 7.603 1.00 53.13 C
ATOM 22 N3 A B 63 13.926 -15.047 7.089 1.00 53.03 N
ATOM 23 C4 A B 63 13.650 -14.761 5.817 1.00 52.04 C
ATOM 24 P U B 64 7.407 -15.174 5.173 1.00 55.66 P
ATOM 25 OP1 U B 64 6.037 -15.734 5.229 1.00 55.95 O
ATOM 26 OP2 U B 64 7.723 -14.217 4.104 1.00 54.45 O
ATOM 27 O5' U B 64 7.786 -14.516 6.577 1.00 57.03 O
TER
Atoms:
C4: (14.733,-17.315,10.106)
N3: (13.817,-17.524,9.072)
OP1: (12.914,-25.426,13.790)
OP2: (14.878,-23.771,13.699)
C2: (13.214,-18.711,8.727)
C1': (12.990,-21.143,9.173)
C3': (12.768,-23.446,9.345)
O5': (13.037,-23.581,12.097)
O4': (12.092,-21.374,10.246)
C5': (11.708,-23.258,11.698)
P: (13.428,-24.055,13.572)
C4': (11.734,-22.775,10.257)
C2': (13.863,-22.392,9.212)
O2': (14.617,-22.575,8.034)
N1: (13.610,-19.804,9.462)
O4: (15.178,-16.184,10.320)
O2: (12.420,-18.776,7.814)
C6: (14.516,-19.659,10.511)
C5: (15.079,-18.497,10.843)
O3': (12.215,-23.786,8.068)
N3: (13.817,-17.524,9.072)
OP1: (12.914,-25.426,13.790)
OP2: (14.878,-23.771,13.699)
C2: (13.214,-18.711,8.727)
C1': (12.990,-21.143,9.173)
C3': (12.768,-23.446,9.345)
O5': (13.037,-23.581,12.097)
O4': (12.092,-21.374,10.246)
C5': (11.708,-23.258,11.698)
P: (13.428,-24.055,13.572)
C4': (11.734,-22.775,10.257)
C2': (13.863,-22.392,9.212)
O2': (14.617,-22.575,8.034)
N1: (13.610,-19.804,9.462)
O4: (15.178,-16.184,10.320)
O2: (12.420,-18.776,7.814)
C6: (14.516,-19.659,10.511)
C5: (15.079,-18.497,10.843)
O3': (12.215,-23.786,8.068)
OP1: (8.794,-16.050,-0.134)
OP2: (10.599,-14.267,0.153)
C3': (9.754,-16.258,4.829)
C1': (11.978,-16.613,5.387)
C5': (10.013,-17.280,2.479)
O4': (11.704,-17.381,4.228)
C8: (12.840,-14.821,3.777)
O2': (10.352,-17.541,6.835)
C6: (15.147,-12.921,5.692)
C5: (14.198,-13.754,5.050)
C4: (13.650,-14.761,5.817)
P: (10.144,-15.664,0.360)
C4': (10.270,-17.394,3.970)
C2': (10.641,-16.395,6.056)
C2: (14.814,-14.191,7.603)
N1: (15.417,-13.167,6.992)
N3: (13.926,-15.047,7.089)
N6: (15.797,-11.905,5.098)
N7: (13.682,-13.804,3.754)
N9: (12.765,-15.435,5.003)
O5': (10.272,-15.965,1.946)
O3': (8.388,-16.437,5.118)
OP2: (10.599,-14.267,0.153)
C3': (9.754,-16.258,4.829)
C1': (11.978,-16.613,5.387)
C5': (10.013,-17.280,2.479)
O4': (11.704,-17.381,4.228)
C8: (12.840,-14.821,3.777)
O2': (10.352,-17.541,6.835)
C6: (15.147,-12.921,5.692)
C5: (14.198,-13.754,5.050)
C4: (13.650,-14.761,5.817)
P: (10.144,-15.664,0.360)
C4': (10.270,-17.394,3.970)
C2': (10.641,-16.395,6.056)
C2: (14.814,-14.191,7.603)
N1: (15.417,-13.167,6.992)
N3: (13.926,-15.047,7.089)
N6: (15.797,-11.905,5.098)
N7: (13.682,-13.804,3.754)
N9: (12.765,-15.435,5.003)
O5': (10.272,-15.965,1.946)
O3': (8.388,-16.437,5.118)
Image (generated by PyMOL):