Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0334:0317
Extra
PDB:
ATOM 1 O3' G A 333 27.756 135.072 26.582 1.00 50.71 O
ATOM 2 P U A 334 27.795 133.834 25.568 1.00 54.67 P
ATOM 3 OP1 U A 334 29.121 133.171 25.699 1.00 54.88 O
ATOM 4 OP2 U A 334 27.348 134.312 24.234 1.00 53.80 O
ATOM 5 O5' U A 334 26.685 132.843 26.135 1.00 55.11 O
ATOM 6 C5' U A 334 26.968 131.960 27.235 1.00 53.46 C
ATOM 7 C4' U A 334 25.822 131.006 27.432 1.00 53.03 C
ATOM 8 O4' U A 334 24.641 131.759 27.806 1.00 54.55 O
ATOM 9 C3' U A 334 25.419 130.254 26.177 1.00 51.92 C
ATOM 10 O3' U A 334 26.238 129.104 25.993 1.00 50.05 O
ATOM 11 C2' U A 334 23.952 129.940 26.448 1.00 54.50 C
ATOM 12 O2' U A 334 23.755 128.860 27.339 1.00 54.44 O
ATOM 13 C1' U A 334 23.504 131.221 27.154 1.00 55.94 C
ATOM 14 N1 U A 334 22.960 132.249 26.249 1.00 59.32 N
ATOM 15 C2 U A 334 21.690 132.050 25.733 1.00 59.85 C
ATOM 16 O2 U A 334 21.028 131.054 25.969 1.00 60.01 O
ATOM 17 N3 U A 334 21.226 133.058 24.922 1.00 61.12 N
ATOM 18 C4 U A 334 21.888 134.217 24.570 1.00 61.24 C
ATOM 19 O4 U A 334 21.325 135.042 23.844 1.00 60.54 O
ATOM 20 C5 U A 334 23.201 134.344 25.128 1.00 61.10 C
ATOM 21 C6 U A 334 23.680 133.383 25.927 1.00 59.84 C
ATOM 22 P A A 335 26.805 128.756 24.532 1.00 50.02 P
ATOM 23 OP1 A A 335 27.820 127.677 24.636 1.00 47.40 O
ATOM 24 OP2 A A 335 27.175 130.044 23.892 1.00 50.10 O
ATOM 25 O5' A A 335 25.537 128.144 23.782 1.00 52.62 O
TER
ATOM 1 O3' U B 316 19.038 124.724 21.582 1.00 56.94 O
ATOM 2 P A B 317 18.545 124.581 23.112 1.00 55.55 P
ATOM 3 OP1 A B 317 19.418 123.551 23.728 1.00 55.25 O
ATOM 4 OP2 A B 317 17.071 124.396 23.125 1.00 55.85 O
ATOM 5 O5' A B 317 18.825 126.002 23.783 1.00 54.15 O
ATOM 6 C5' A B 317 20.021 126.244 24.552 1.00 52.36 C
ATOM 7 C4' A B 317 19.999 127.634 25.144 1.00 51.35 C
ATOM 8 O4' A B 317 19.879 128.604 24.067 1.00 53.07 O
ATOM 9 C3' A B 317 18.854 127.936 26.108 1.00 51.59 C
ATOM 10 O3' A B 317 19.255 128.956 27.037 1.00 52.67 O
ATOM 11 C2' A B 317 17.827 128.573 25.180 1.00 51.82 C
ATOM 12 O2' A B 317 16.904 129.394 25.861 1.00 49.50 O
ATOM 13 C1' A B 317 18.744 129.410 24.293 1.00 53.18 C
ATOM 14 N9 A B 317 18.202 129.832 23.003 1.00 56.76 N
ATOM 15 C8 A B 317 17.413 129.140 22.115 1.00 57.59 C
ATOM 16 N7 A B 317 17.091 129.829 21.046 1.00 58.88 N
ATOM 17 C5 A B 317 17.713 131.055 21.241 1.00 60.12 C
ATOM 18 C6 A B 317 17.759 132.230 20.468 1.00 59.43 C
ATOM 19 N6 A B 317 17.140 132.371 19.297 1.00 59.73 N
ATOM 20 N1 A B 317 18.472 133.270 20.951 1.00 60.39 N
ATOM 21 C2 A B 317 19.092 133.134 22.130 1.00 60.54 C
ATOM 22 N3 A B 317 19.123 132.086 22.948 1.00 60.26 N
ATOM 23 C4 A B 317 18.405 131.067 22.440 1.00 59.90 C
ATOM 24 P C B 318 20.097 128.582 28.357 1.00 51.85 P
ATOM 25 OP1 C B 318 20.125 129.827 29.165 1.00 50.19 O
ATOM 26 OP2 C B 318 21.380 127.927 27.958 1.00 47.44 O
ATOM 27 O5' C B 318 19.204 127.515 29.138 1.00 51.63 O
TER
ATOM 2 P U A 334 27.795 133.834 25.568 1.00 54.67 P
ATOM 3 OP1 U A 334 29.121 133.171 25.699 1.00 54.88 O
ATOM 4 OP2 U A 334 27.348 134.312 24.234 1.00 53.80 O
ATOM 5 O5' U A 334 26.685 132.843 26.135 1.00 55.11 O
ATOM 6 C5' U A 334 26.968 131.960 27.235 1.00 53.46 C
ATOM 7 C4' U A 334 25.822 131.006 27.432 1.00 53.03 C
ATOM 8 O4' U A 334 24.641 131.759 27.806 1.00 54.55 O
ATOM 9 C3' U A 334 25.419 130.254 26.177 1.00 51.92 C
ATOM 10 O3' U A 334 26.238 129.104 25.993 1.00 50.05 O
ATOM 11 C2' U A 334 23.952 129.940 26.448 1.00 54.50 C
ATOM 12 O2' U A 334 23.755 128.860 27.339 1.00 54.44 O
ATOM 13 C1' U A 334 23.504 131.221 27.154 1.00 55.94 C
ATOM 14 N1 U A 334 22.960 132.249 26.249 1.00 59.32 N
ATOM 15 C2 U A 334 21.690 132.050 25.733 1.00 59.85 C
ATOM 16 O2 U A 334 21.028 131.054 25.969 1.00 60.01 O
ATOM 17 N3 U A 334 21.226 133.058 24.922 1.00 61.12 N
ATOM 18 C4 U A 334 21.888 134.217 24.570 1.00 61.24 C
ATOM 19 O4 U A 334 21.325 135.042 23.844 1.00 60.54 O
ATOM 20 C5 U A 334 23.201 134.344 25.128 1.00 61.10 C
ATOM 21 C6 U A 334 23.680 133.383 25.927 1.00 59.84 C
ATOM 22 P A A 335 26.805 128.756 24.532 1.00 50.02 P
ATOM 23 OP1 A A 335 27.820 127.677 24.636 1.00 47.40 O
ATOM 24 OP2 A A 335 27.175 130.044 23.892 1.00 50.10 O
ATOM 25 O5' A A 335 25.537 128.144 23.782 1.00 52.62 O
TER
ATOM 1 O3' U B 316 19.038 124.724 21.582 1.00 56.94 O
ATOM 2 P A B 317 18.545 124.581 23.112 1.00 55.55 P
ATOM 3 OP1 A B 317 19.418 123.551 23.728 1.00 55.25 O
ATOM 4 OP2 A B 317 17.071 124.396 23.125 1.00 55.85 O
ATOM 5 O5' A B 317 18.825 126.002 23.783 1.00 54.15 O
ATOM 6 C5' A B 317 20.021 126.244 24.552 1.00 52.36 C
ATOM 7 C4' A B 317 19.999 127.634 25.144 1.00 51.35 C
ATOM 8 O4' A B 317 19.879 128.604 24.067 1.00 53.07 O
ATOM 9 C3' A B 317 18.854 127.936 26.108 1.00 51.59 C
ATOM 10 O3' A B 317 19.255 128.956 27.037 1.00 52.67 O
ATOM 11 C2' A B 317 17.827 128.573 25.180 1.00 51.82 C
ATOM 12 O2' A B 317 16.904 129.394 25.861 1.00 49.50 O
ATOM 13 C1' A B 317 18.744 129.410 24.293 1.00 53.18 C
ATOM 14 N9 A B 317 18.202 129.832 23.003 1.00 56.76 N
ATOM 15 C8 A B 317 17.413 129.140 22.115 1.00 57.59 C
ATOM 16 N7 A B 317 17.091 129.829 21.046 1.00 58.88 N
ATOM 17 C5 A B 317 17.713 131.055 21.241 1.00 60.12 C
ATOM 18 C6 A B 317 17.759 132.230 20.468 1.00 59.43 C
ATOM 19 N6 A B 317 17.140 132.371 19.297 1.00 59.73 N
ATOM 20 N1 A B 317 18.472 133.270 20.951 1.00 60.39 N
ATOM 21 C2 A B 317 19.092 133.134 22.130 1.00 60.54 C
ATOM 22 N3 A B 317 19.123 132.086 22.948 1.00 60.26 N
ATOM 23 C4 A B 317 18.405 131.067 22.440 1.00 59.90 C
ATOM 24 P C B 318 20.097 128.582 28.357 1.00 51.85 P
ATOM 25 OP1 C B 318 20.125 129.827 29.165 1.00 50.19 O
ATOM 26 OP2 C B 318 21.380 127.927 27.958 1.00 47.44 O
ATOM 27 O5' C B 318 19.204 127.515 29.138 1.00 51.63 O
TER
Atoms:
C4: (21.888,134.217,24.570)
N3: (21.226,133.058,24.922)
OP1: (29.121,133.171,25.699)
OP2: (27.348,134.312,24.234)
C2: (21.690,132.050,25.733)
C1': (23.504,131.221,27.154)
C3': (25.419,130.254,26.177)
O5': (26.685,132.843,26.135)
O4': (24.641,131.759,27.806)
C5': (26.968,131.960,27.235)
P: (27.795,133.834,25.568)
C4': (25.822,131.006,27.432)
C2': (23.952,129.940,26.448)
O2': (23.755,128.860,27.339)
N1: (22.960,132.249,26.249)
O4: (21.325,135.042,23.844)
O2: (21.028,131.054,25.969)
C6: (23.680,133.383,25.927)
C5: (23.201,134.344,25.128)
O3': (26.238,129.104,25.993)
N3: (21.226,133.058,24.922)
OP1: (29.121,133.171,25.699)
OP2: (27.348,134.312,24.234)
C2: (21.690,132.050,25.733)
C1': (23.504,131.221,27.154)
C3': (25.419,130.254,26.177)
O5': (26.685,132.843,26.135)
O4': (24.641,131.759,27.806)
C5': (26.968,131.960,27.235)
P: (27.795,133.834,25.568)
C4': (25.822,131.006,27.432)
C2': (23.952,129.940,26.448)
O2': (23.755,128.860,27.339)
N1: (22.960,132.249,26.249)
O4: (21.325,135.042,23.844)
O2: (21.028,131.054,25.969)
C6: (23.680,133.383,25.927)
C5: (23.201,134.344,25.128)
O3': (26.238,129.104,25.993)
OP1: (19.418,123.551,23.728)
OP2: (17.071,124.396,23.125)
C3': (18.854,127.936,26.108)
C1': (18.744,129.410,24.293)
C5': (20.021,126.244,24.552)
O4': (19.879,128.604,24.067)
C8: (17.413,129.140,22.115)
O2': (16.904,129.394,25.861)
C6: (17.759,132.230,20.468)
C5: (17.713,131.055,21.241)
C4: (18.405,131.067,22.440)
P: (18.545,124.581,23.112)
C4': (19.999,127.634,25.144)
C2': (17.827,128.573,25.180)
C2: (19.092,133.134,22.130)
N1: (18.472,133.270,20.951)
N3: (19.123,132.086,22.948)
N6: (17.140,132.371,19.297)
N7: (17.091,129.829,21.046)
N9: (18.202,129.832,23.003)
O5': (18.825,126.002,23.783)
O3': (19.255,128.956,27.037)
OP2: (17.071,124.396,23.125)
C3': (18.854,127.936,26.108)
C1': (18.744,129.410,24.293)
C5': (20.021,126.244,24.552)
O4': (19.879,128.604,24.067)
C8: (17.413,129.140,22.115)
O2': (16.904,129.394,25.861)
C6: (17.759,132.230,20.468)
C5: (17.713,131.055,21.241)
C4: (18.405,131.067,22.440)
P: (18.545,124.581,23.112)
C4': (19.999,127.634,25.144)
C2': (17.827,128.573,25.180)
C2: (19.092,133.134,22.130)
N1: (18.472,133.270,20.951)
N3: (19.123,132.086,22.948)
N6: (17.140,132.371,19.297)
N7: (17.091,129.829,21.046)
N9: (18.202,129.832,23.003)
O5': (18.825,126.002,23.783)
O3': (19.255,128.956,27.037)
Image (generated by PyMOL):