ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:02009:02029

Extra

PDB:
ATOM 1 O3' A A2008 34.233 132.915 103.699 1.00 32.44 O
ATOM 2 P U A2009 34.348 134.419 104.250 1.00 34.54 P
ATOM 3 OP1 U A2009 33.002 134.803 104.755 1.00 34.40 O
ATOM 4 OP2 U A2009 35.016 135.264 103.221 1.00 32.94 O
ATOM 5 O5' U A2009 35.309 134.281 105.513 1.00 34.38 O
ATOM 6 C5' U A2009 36.296 135.277 105.812 1.00 32.01 C
ATOM 7 C4' U A2009 36.620 135.259 107.284 1.00 32.88 C
ATOM 8 O4' U A2009 35.470 135.737 108.025 1.00 33.63 O
ATOM 9 C3' U A2009 36.894 133.893 107.896 1.00 33.74 C
ATOM 10 O3' U A2009 38.204 133.394 107.645 1.00 33.07 O
ATOM 11 C2' U A2009 36.610 134.138 109.370 1.00 32.28 C
ATOM 12 O2' U A2009 37.665 134.794 110.042 1.00 30.87 O
ATOM 13 C1' U A2009 35.400 135.071 109.281 1.00 33.55 C
ATOM 14 N1 U A2009 34.111 134.365 109.369 1.00 33.94 N
ATOM 15 C2 U A2009 33.620 134.074 110.632 1.00 35.17 C
ATOM 16 O2 U A2009 34.210 134.361 111.658 1.00 36.29 O
ATOM 17 N3 U A2009 32.409 133.430 110.649 1.00 37.15 N
ATOM 18 C4 U A2009 31.654 133.052 109.560 1.00 38.13 C
ATOM 19 O4 U A2009 30.564 132.503 109.742 1.00 39.19 O
ATOM 20 C5 U A2009 32.232 133.377 108.292 1.00 36.12 C
ATOM 21 C6 U A2009 33.410 134.006 108.241 1.00 33.30 C
ATOM 22 P U A2010 38.373 132.021 106.835 1.00 33.06 P
ATOM 23 OP1 U A2010 38.877 132.387 105.497 1.00 34.23 O
ATOM 24 OP2 U A2010 37.113 131.257 106.958 1.00 37.07 O
ATOM 25 O5' U A2010 39.454 131.169 107.636 1.00 33.62 O
TER

ATOM 1 O3' G B2028 34.156 133.863 120.334 1.00 36.54 O
ATOM 2 P A B2029 33.005 134.943 120.063 1.00 39.16 P
ATOM 3 OP1 A B2029 33.464 136.230 120.638 1.00 39.54 O
ATOM 4 OP2 A B2029 31.711 134.363 120.502 1.00 40.59 O
ATOM 5 O5' A B2029 32.958 135.081 118.477 1.00 38.80 O
ATOM 6 C5' A B2029 34.003 135.757 117.754 1.00 36.29 C
ATOM 7 C4' A B2029 33.672 135.798 116.280 1.00 36.49 C
ATOM 8 O4' A B2029 33.680 134.454 115.719 1.00 36.39 O
ATOM 9 C3' A B2029 32.286 136.318 115.952 1.00 36.24 C
ATOM 10 O3' A B2029 32.248 137.734 115.985 1.00 36.47 O
ATOM 11 C2' A B2029 32.056 135.742 114.562 1.00 36.50 C
ATOM 12 O2' A B2029 32.752 136.456 113.561 1.00 35.92 O
ATOM 13 C1' A B2029 32.676 134.350 114.716 1.00 36.59 C
ATOM 14 N9 A B2029 31.688 133.364 115.158 1.00 36.66 N
ATOM 15 C8 A B2029 31.334 133.061 116.449 1.00 36.62 C
ATOM 16 N7 A B2029 30.383 132.165 116.541 1.00 35.32 N
ATOM 17 C5 A B2029 30.095 131.849 115.222 1.00 35.90 C
ATOM 18 C6 A B2029 29.165 130.971 114.646 1.00 35.89 C
ATOM 19 N6 A B2029 28.316 130.232 115.357 1.00 37.68 N
ATOM 20 N1 A B2029 29.132 130.880 113.299 1.00 35.81 N
ATOM 21 C2 A B2029 29.975 131.634 112.591 1.00 37.58 C
ATOM 22 N3 A B2029 30.890 132.507 113.017 1.00 39.09 N
ATOM 23 C4 A B2029 30.900 132.569 114.359 1.00 37.02 C
ATOM 24 P C B2030 30.980 138.481 116.625 1.00 38.46 P
ATOM 25 OP1 C B2030 31.478 139.629 117.423 1.00 37.89 O
ATOM 26 OP2 C B2030 30.110 137.455 117.272 1.00 37.09 O
ATOM 27 O5' C B2030 30.213 139.078 115.361 1.00 37.58 O
TER

Atoms:
C4: (31.654,133.052,109.560)
N3: (32.409,133.430,110.649)
OP1: (33.002,134.803,104.755)
OP2: (35.016,135.264,103.221)
C2: (33.620,134.074,110.632)
C1': (35.400,135.071,109.281)
C3': (36.894,133.893,107.896)
O5': (35.309,134.281,105.513)
O4': (35.470,135.737,108.025)
C5': (36.296,135.277,105.812)
P: (34.348,134.419,104.250)
C4': (36.620,135.259,107.284)
C2': (36.610,134.138,109.370)
O2': (37.665,134.794,110.042)
N1: (34.111,134.365,109.369)
O4: (30.564,132.503,109.742)
O2: (34.210,134.361,111.658)
C6: (33.410,134.006,108.241)
C5: (32.232,133.377,108.292)
O3': (38.204,133.394,107.645)
OP1: (33.464,136.230,120.638)
OP2: (31.711,134.363,120.502)
C3': (32.286,136.318,115.952)
C1': (32.676,134.350,114.716)
C5': (34.003,135.757,117.754)
O4': (33.680,134.454,115.719)
C8: (31.334,133.061,116.449)
O2': (32.752,136.456,113.561)
C6: (29.165,130.971,114.646)
C5: (30.095,131.849,115.222)
C4: (30.900,132.569,114.359)
P: (33.005,134.943,120.063)
C4': (33.672,135.798,116.280)
C2': (32.056,135.742,114.562)
C2: (29.975,131.634,112.591)
N1: (29.132,130.880,113.299)
N3: (30.890,132.507,113.017)
N6: (28.316,130.232,115.357)
N7: (30.383,132.165,116.541)
N9: (31.688,133.364,115.158)
O5': (32.958,135.081,118.477)
O3': (32.248,137.734,115.985)
Image (generated by PyMOL):
PyMOL image
show in jmol