Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0827:02001
Extra
PDB:
ATOM 1 O3' C A 826 63.158 143.674 91.012 1.00 28.92 O
ATOM 2 P U A 827 61.613 144.050 91.210 1.00 28.16 P
ATOM 3 OP1 U A 827 61.439 144.754 92.497 1.00 27.13 O
ATOM 4 OP2 U A 827 60.835 142.821 90.931 1.00 31.92 O
ATOM 5 O5' U A 827 61.315 145.088 90.043 1.00 27.12 O
ATOM 6 C5' U A 827 61.633 144.781 88.676 1.00 23.11 C
ATOM 7 C4' U A 827 60.403 144.933 87.817 1.00 26.94 C
ATOM 8 O4' U A 827 59.409 143.962 88.230 1.00 28.74 O
ATOM 9 C3' U A 827 59.677 146.262 87.940 1.00 25.36 C
ATOM 10 O3' U A 827 60.310 147.211 87.085 1.00 22.96 O
ATOM 11 C2' U A 827 58.264 145.913 87.473 1.00 25.73 C
ATOM 12 O2' U A 827 58.138 145.898 86.073 1.00 28.79 O
ATOM 13 C1' U A 827 58.120 144.463 87.942 1.00 27.09 C
ATOM 14 N1 U A 827 57.231 144.203 89.085 1.00 28.98 N
ATOM 15 C2 U A 827 55.879 144.497 88.943 1.00 29.21 C
ATOM 16 O2 U A 827 55.407 144.992 87.937 1.00 29.93 O
ATOM 17 N3 U A 827 55.104 144.200 90.033 1.00 30.18 N
ATOM 18 C4 U A 827 55.525 143.668 91.230 1.00 31.90 C
ATOM 19 O4 U A 827 54.714 143.518 92.144 1.00 34.00 O
ATOM 20 C5 U A 827 56.928 143.400 91.302 1.00 32.00 C
ATOM 21 C6 U A 827 57.712 143.670 90.255 1.00 28.83 C
ATOM 22 P A A 828 59.922 148.762 87.172 1.00 26.14 P
ATOM 23 OP1 A A 828 58.903 148.954 88.234 1.00 27.03 O
ATOM 24 OP2 A A 828 59.652 149.248 85.800 1.00 26.40 O
ATOM 25 O5' A A 828 61.266 149.458 87.661 1.00 26.18 O
TER
ATOM 1 O3' A B2000 49.025 147.548 83.411 1.00 27.99 O
ATOM 2 P A B2001 48.392 146.097 83.642 1.00 28.63 P
ATOM 3 OP1 A B2001 48.202 145.541 82.275 1.00 29.14 O
ATOM 4 OP2 A B2001 47.230 146.208 84.557 1.00 27.21 O
ATOM 5 O5' A B2001 49.552 145.286 84.366 1.00 26.27 O
ATOM 6 C5' A B2001 50.848 145.197 83.755 1.00 26.66 C
ATOM 7 C4' A B2001 51.861 144.679 84.740 1.00 26.04 C
ATOM 8 O4' A B2001 51.969 145.576 85.872 1.00 24.53 O
ATOM 9 C3' A B2001 51.534 143.334 85.355 1.00 25.36 C
ATOM 10 O3' A B2001 51.939 142.313 84.467 1.00 26.71 O
ATOM 11 C2' A B2001 52.373 143.365 86.620 1.00 24.62 C
ATOM 12 O2' A B2001 53.738 143.141 86.336 1.00 22.64 O
ATOM 13 C1' A B2001 52.204 144.824 87.046 1.00 24.90 C
ATOM 14 N9 A B2001 51.081 145.052 87.955 1.00 27.48 N
ATOM 15 C8 A B2001 49.805 145.446 87.635 1.00 26.90 C
ATOM 16 N7 A B2001 49.031 145.625 88.677 1.00 28.16 N
ATOM 17 C5 A B2001 49.846 145.318 89.757 1.00 28.76 C
ATOM 18 C6 A B2001 49.624 145.331 91.144 1.00 29.05 C
ATOM 19 N6 A B2001 48.469 145.681 91.709 1.00 28.47 N
ATOM 20 N1 A B2001 50.647 144.970 91.943 1.00 30.38 N
ATOM 21 C2 A B2001 51.810 144.622 91.380 1.00 30.38 C
ATOM 22 N3 A B2001 52.143 144.575 90.097 1.00 29.44 N
ATOM 23 C4 A B2001 51.106 144.943 89.326 1.00 28.92 C
ATOM 24 P C B2002 51.355 140.835 84.625 1.00 27.49 P
ATOM 25 OP1 C B2002 52.009 140.070 83.530 1.00 27.09 O
ATOM 26 OP2 C B2002 49.876 140.885 84.703 1.00 29.61 O
ATOM 27 O5' C B2002 51.907 140.317 86.030 1.00 27.47 O
TER
ATOM 2 P U A 827 61.613 144.050 91.210 1.00 28.16 P
ATOM 3 OP1 U A 827 61.439 144.754 92.497 1.00 27.13 O
ATOM 4 OP2 U A 827 60.835 142.821 90.931 1.00 31.92 O
ATOM 5 O5' U A 827 61.315 145.088 90.043 1.00 27.12 O
ATOM 6 C5' U A 827 61.633 144.781 88.676 1.00 23.11 C
ATOM 7 C4' U A 827 60.403 144.933 87.817 1.00 26.94 C
ATOM 8 O4' U A 827 59.409 143.962 88.230 1.00 28.74 O
ATOM 9 C3' U A 827 59.677 146.262 87.940 1.00 25.36 C
ATOM 10 O3' U A 827 60.310 147.211 87.085 1.00 22.96 O
ATOM 11 C2' U A 827 58.264 145.913 87.473 1.00 25.73 C
ATOM 12 O2' U A 827 58.138 145.898 86.073 1.00 28.79 O
ATOM 13 C1' U A 827 58.120 144.463 87.942 1.00 27.09 C
ATOM 14 N1 U A 827 57.231 144.203 89.085 1.00 28.98 N
ATOM 15 C2 U A 827 55.879 144.497 88.943 1.00 29.21 C
ATOM 16 O2 U A 827 55.407 144.992 87.937 1.00 29.93 O
ATOM 17 N3 U A 827 55.104 144.200 90.033 1.00 30.18 N
ATOM 18 C4 U A 827 55.525 143.668 91.230 1.00 31.90 C
ATOM 19 O4 U A 827 54.714 143.518 92.144 1.00 34.00 O
ATOM 20 C5 U A 827 56.928 143.400 91.302 1.00 32.00 C
ATOM 21 C6 U A 827 57.712 143.670 90.255 1.00 28.83 C
ATOM 22 P A A 828 59.922 148.762 87.172 1.00 26.14 P
ATOM 23 OP1 A A 828 58.903 148.954 88.234 1.00 27.03 O
ATOM 24 OP2 A A 828 59.652 149.248 85.800 1.00 26.40 O
ATOM 25 O5' A A 828 61.266 149.458 87.661 1.00 26.18 O
TER
ATOM 1 O3' A B2000 49.025 147.548 83.411 1.00 27.99 O
ATOM 2 P A B2001 48.392 146.097 83.642 1.00 28.63 P
ATOM 3 OP1 A B2001 48.202 145.541 82.275 1.00 29.14 O
ATOM 4 OP2 A B2001 47.230 146.208 84.557 1.00 27.21 O
ATOM 5 O5' A B2001 49.552 145.286 84.366 1.00 26.27 O
ATOM 6 C5' A B2001 50.848 145.197 83.755 1.00 26.66 C
ATOM 7 C4' A B2001 51.861 144.679 84.740 1.00 26.04 C
ATOM 8 O4' A B2001 51.969 145.576 85.872 1.00 24.53 O
ATOM 9 C3' A B2001 51.534 143.334 85.355 1.00 25.36 C
ATOM 10 O3' A B2001 51.939 142.313 84.467 1.00 26.71 O
ATOM 11 C2' A B2001 52.373 143.365 86.620 1.00 24.62 C
ATOM 12 O2' A B2001 53.738 143.141 86.336 1.00 22.64 O
ATOM 13 C1' A B2001 52.204 144.824 87.046 1.00 24.90 C
ATOM 14 N9 A B2001 51.081 145.052 87.955 1.00 27.48 N
ATOM 15 C8 A B2001 49.805 145.446 87.635 1.00 26.90 C
ATOM 16 N7 A B2001 49.031 145.625 88.677 1.00 28.16 N
ATOM 17 C5 A B2001 49.846 145.318 89.757 1.00 28.76 C
ATOM 18 C6 A B2001 49.624 145.331 91.144 1.00 29.05 C
ATOM 19 N6 A B2001 48.469 145.681 91.709 1.00 28.47 N
ATOM 20 N1 A B2001 50.647 144.970 91.943 1.00 30.38 N
ATOM 21 C2 A B2001 51.810 144.622 91.380 1.00 30.38 C
ATOM 22 N3 A B2001 52.143 144.575 90.097 1.00 29.44 N
ATOM 23 C4 A B2001 51.106 144.943 89.326 1.00 28.92 C
ATOM 24 P C B2002 51.355 140.835 84.625 1.00 27.49 P
ATOM 25 OP1 C B2002 52.009 140.070 83.530 1.00 27.09 O
ATOM 26 OP2 C B2002 49.876 140.885 84.703 1.00 29.61 O
ATOM 27 O5' C B2002 51.907 140.317 86.030 1.00 27.47 O
TER
Atoms:
C4: (55.525,143.668,91.230)
N3: (55.104,144.200,90.033)
OP1: (61.439,144.754,92.497)
OP2: (60.835,142.821,90.931)
C2: (55.879,144.497,88.943)
C1': (58.120,144.463,87.942)
C3': (59.677,146.262,87.940)
O5': (61.315,145.088,90.043)
O4': (59.409,143.962,88.230)
C5': (61.633,144.781,88.676)
P: (61.613,144.050,91.210)
C4': (60.403,144.933,87.817)
C2': (58.264,145.913,87.473)
O2': (58.138,145.898,86.073)
N1: (57.231,144.203,89.085)
O4: (54.714,143.518,92.144)
O2: (55.407,144.992,87.937)
C6: (57.712,143.670,90.255)
C5: (56.928,143.400,91.302)
O3': (60.310,147.211,87.085)
N3: (55.104,144.200,90.033)
OP1: (61.439,144.754,92.497)
OP2: (60.835,142.821,90.931)
C2: (55.879,144.497,88.943)
C1': (58.120,144.463,87.942)
C3': (59.677,146.262,87.940)
O5': (61.315,145.088,90.043)
O4': (59.409,143.962,88.230)
C5': (61.633,144.781,88.676)
P: (61.613,144.050,91.210)
C4': (60.403,144.933,87.817)
C2': (58.264,145.913,87.473)
O2': (58.138,145.898,86.073)
N1: (57.231,144.203,89.085)
O4: (54.714,143.518,92.144)
O2: (55.407,144.992,87.937)
C6: (57.712,143.670,90.255)
C5: (56.928,143.400,91.302)
O3': (60.310,147.211,87.085)
OP1: (48.202,145.541,82.275)
OP2: (47.230,146.208,84.557)
C3': (51.534,143.334,85.355)
C1': (52.204,144.824,87.046)
C5': (50.848,145.197,83.755)
O4': (51.969,145.576,85.872)
C8: (49.805,145.446,87.635)
O2': (53.738,143.141,86.336)
C6: (49.624,145.331,91.144)
C5: (49.846,145.318,89.757)
C4: (51.106,144.943,89.326)
P: (48.392,146.097,83.642)
C4': (51.861,144.679,84.740)
C2': (52.373,143.365,86.620)
C2: (51.810,144.622,91.380)
N1: (50.647,144.970,91.943)
N3: (52.143,144.575,90.097)
N6: (48.469,145.681,91.709)
N7: (49.031,145.625,88.677)
N9: (51.081,145.052,87.955)
O5': (49.552,145.286,84.366)
O3': (51.939,142.313,84.467)
OP2: (47.230,146.208,84.557)
C3': (51.534,143.334,85.355)
C1': (52.204,144.824,87.046)
C5': (50.848,145.197,83.755)
O4': (51.969,145.576,85.872)
C8: (49.805,145.446,87.635)
O2': (53.738,143.141,86.336)
C6: (49.624,145.331,91.144)
C5: (49.846,145.318,89.757)
C4: (51.106,144.943,89.326)
P: (48.392,146.097,83.642)
C4': (51.861,144.679,84.740)
C2': (52.373,143.365,86.620)
C2: (51.810,144.622,91.380)
N1: (50.647,144.970,91.943)
N3: (52.143,144.575,90.097)
N6: (48.469,145.681,91.709)
N7: (49.031,145.625,88.677)
N9: (51.081,145.052,87.955)
O5': (49.552,145.286,84.366)
O3': (51.939,142.313,84.467)
Image (generated by PyMOL):