Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0334:0317
Extra
PDB:
ATOM 1 O3' G A 333 27.769 135.078 26.701 1.00 42.78 O
ATOM 2 P U A 334 27.834 133.890 25.626 1.00 45.21 P
ATOM 3 OP1 U A 334 29.163 133.244 25.732 1.00 46.73 O
ATOM 4 OP2 U A 334 27.386 134.415 24.313 1.00 46.13 O
ATOM 5 O5' U A 334 26.745 132.855 26.145 1.00 47.16 O
ATOM 6 C5' U A 334 27.017 131.989 27.264 1.00 47.24 C
ATOM 7 C4' U A 334 25.876 131.027 27.457 1.00 47.48 C
ATOM 8 O4' U A 334 24.687 131.771 27.823 1.00 48.99 O
ATOM 9 C3' U A 334 25.487 130.269 26.203 1.00 46.66 C
ATOM 10 O3' U A 334 26.298 129.112 26.048 1.00 44.70 O
ATOM 11 C2' U A 334 24.023 129.949 26.461 1.00 49.43 C
ATOM 12 O2' U A 334 23.844 128.870 27.354 1.00 50.78 O
ATOM 13 C1' U A 334 23.561 131.225 27.166 1.00 50.74 C
ATOM 14 N1 U A 334 23.006 132.250 26.266 1.00 54.43 N
ATOM 15 C2 U A 334 21.748 132.027 25.734 1.00 55.24 C
ATOM 16 O2 U A 334 21.105 131.020 25.962 1.00 56.99 O
ATOM 17 N3 U A 334 21.272 133.028 24.923 1.00 55.87 N
ATOM 18 C4 U A 334 21.911 134.203 24.590 1.00 56.13 C
ATOM 19 O4 U A 334 21.339 135.021 23.866 1.00 55.58 O
ATOM 20 C5 U A 334 23.213 134.357 25.168 1.00 56.39 C
ATOM 21 C6 U A 334 23.703 133.402 25.964 1.00 55.22 C
ATOM 22 P A A 335 26.862 128.726 24.599 1.00 43.92 P
ATOM 23 OP1 A A 335 27.892 127.668 24.750 1.00 42.60 O
ATOM 24 OP2 A A 335 27.209 129.986 23.907 1.00 44.73 O
ATOM 25 O5' A A 335 25.605 128.086 23.862 1.00 46.26 O
TER
ATOM 1 O3' U B 316 19.100 124.610 21.586 1.00 51.46 O
ATOM 2 P A B 317 18.629 124.495 23.123 1.00 52.00 P
ATOM 3 OP1 A B 317 19.490 123.466 23.766 1.00 49.82 O
ATOM 4 OP2 A B 317 17.154 124.328 23.137 1.00 52.12 O
ATOM 5 O5' A B 317 18.930 125.924 23.771 1.00 50.30 O
ATOM 6 C5' A B 317 20.085 126.138 24.612 1.00 47.94 C
ATOM 7 C4' A B 317 20.082 127.540 25.180 1.00 47.16 C
ATOM 8 O4' A B 317 19.992 128.494 24.086 1.00 48.49 O
ATOM 9 C3' A B 317 18.937 127.888 26.129 1.00 47.71 C
ATOM 10 O3' A B 317 19.353 128.915 27.047 1.00 48.60 O
ATOM 11 C2' A B 317 17.937 128.533 25.181 1.00 47.64 C
ATOM 12 O2' A B 317 17.039 129.397 25.835 1.00 47.79 O
ATOM 13 C1' A B 317 18.879 129.334 24.291 1.00 49.39 C
ATOM 14 N9 A B 317 18.353 129.757 22.993 1.00 52.64 N
ATOM 15 C8 A B 317 17.601 129.052 22.085 1.00 53.36 C
ATOM 16 N7 A B 317 17.285 129.739 21.014 1.00 54.47 N
ATOM 17 C5 A B 317 17.869 130.980 21.229 1.00 55.08 C
ATOM 18 C6 A B 317 17.901 132.157 20.463 1.00 55.11 C
ATOM 19 N6 A B 317 17.305 132.286 19.278 1.00 54.53 N
ATOM 20 N1 A B 317 18.575 133.215 20.965 1.00 56.38 N
ATOM 21 C2 A B 317 19.174 133.089 22.154 1.00 56.33 C
ATOM 22 N3 A B 317 19.214 132.038 22.968 1.00 55.90 N
ATOM 23 C4 A B 317 18.533 131.003 22.442 1.00 55.03 C
ATOM 24 P C B 318 20.141 128.543 28.405 1.00 48.48 P
ATOM 25 OP1 C B 318 20.097 129.772 29.239 1.00 46.25 O
ATOM 26 OP2 C B 318 21.455 127.935 28.051 1.00 44.43 O
ATOM 27 O5' C B 318 19.258 127.429 29.132 1.00 48.85 O
TER
ATOM 2 P U A 334 27.834 133.890 25.626 1.00 45.21 P
ATOM 3 OP1 U A 334 29.163 133.244 25.732 1.00 46.73 O
ATOM 4 OP2 U A 334 27.386 134.415 24.313 1.00 46.13 O
ATOM 5 O5' U A 334 26.745 132.855 26.145 1.00 47.16 O
ATOM 6 C5' U A 334 27.017 131.989 27.264 1.00 47.24 C
ATOM 7 C4' U A 334 25.876 131.027 27.457 1.00 47.48 C
ATOM 8 O4' U A 334 24.687 131.771 27.823 1.00 48.99 O
ATOM 9 C3' U A 334 25.487 130.269 26.203 1.00 46.66 C
ATOM 10 O3' U A 334 26.298 129.112 26.048 1.00 44.70 O
ATOM 11 C2' U A 334 24.023 129.949 26.461 1.00 49.43 C
ATOM 12 O2' U A 334 23.844 128.870 27.354 1.00 50.78 O
ATOM 13 C1' U A 334 23.561 131.225 27.166 1.00 50.74 C
ATOM 14 N1 U A 334 23.006 132.250 26.266 1.00 54.43 N
ATOM 15 C2 U A 334 21.748 132.027 25.734 1.00 55.24 C
ATOM 16 O2 U A 334 21.105 131.020 25.962 1.00 56.99 O
ATOM 17 N3 U A 334 21.272 133.028 24.923 1.00 55.87 N
ATOM 18 C4 U A 334 21.911 134.203 24.590 1.00 56.13 C
ATOM 19 O4 U A 334 21.339 135.021 23.866 1.00 55.58 O
ATOM 20 C5 U A 334 23.213 134.357 25.168 1.00 56.39 C
ATOM 21 C6 U A 334 23.703 133.402 25.964 1.00 55.22 C
ATOM 22 P A A 335 26.862 128.726 24.599 1.00 43.92 P
ATOM 23 OP1 A A 335 27.892 127.668 24.750 1.00 42.60 O
ATOM 24 OP2 A A 335 27.209 129.986 23.907 1.00 44.73 O
ATOM 25 O5' A A 335 25.605 128.086 23.862 1.00 46.26 O
TER
ATOM 1 O3' U B 316 19.100 124.610 21.586 1.00 51.46 O
ATOM 2 P A B 317 18.629 124.495 23.123 1.00 52.00 P
ATOM 3 OP1 A B 317 19.490 123.466 23.766 1.00 49.82 O
ATOM 4 OP2 A B 317 17.154 124.328 23.137 1.00 52.12 O
ATOM 5 O5' A B 317 18.930 125.924 23.771 1.00 50.30 O
ATOM 6 C5' A B 317 20.085 126.138 24.612 1.00 47.94 C
ATOM 7 C4' A B 317 20.082 127.540 25.180 1.00 47.16 C
ATOM 8 O4' A B 317 19.992 128.494 24.086 1.00 48.49 O
ATOM 9 C3' A B 317 18.937 127.888 26.129 1.00 47.71 C
ATOM 10 O3' A B 317 19.353 128.915 27.047 1.00 48.60 O
ATOM 11 C2' A B 317 17.937 128.533 25.181 1.00 47.64 C
ATOM 12 O2' A B 317 17.039 129.397 25.835 1.00 47.79 O
ATOM 13 C1' A B 317 18.879 129.334 24.291 1.00 49.39 C
ATOM 14 N9 A B 317 18.353 129.757 22.993 1.00 52.64 N
ATOM 15 C8 A B 317 17.601 129.052 22.085 1.00 53.36 C
ATOM 16 N7 A B 317 17.285 129.739 21.014 1.00 54.47 N
ATOM 17 C5 A B 317 17.869 130.980 21.229 1.00 55.08 C
ATOM 18 C6 A B 317 17.901 132.157 20.463 1.00 55.11 C
ATOM 19 N6 A B 317 17.305 132.286 19.278 1.00 54.53 N
ATOM 20 N1 A B 317 18.575 133.215 20.965 1.00 56.38 N
ATOM 21 C2 A B 317 19.174 133.089 22.154 1.00 56.33 C
ATOM 22 N3 A B 317 19.214 132.038 22.968 1.00 55.90 N
ATOM 23 C4 A B 317 18.533 131.003 22.442 1.00 55.03 C
ATOM 24 P C B 318 20.141 128.543 28.405 1.00 48.48 P
ATOM 25 OP1 C B 318 20.097 129.772 29.239 1.00 46.25 O
ATOM 26 OP2 C B 318 21.455 127.935 28.051 1.00 44.43 O
ATOM 27 O5' C B 318 19.258 127.429 29.132 1.00 48.85 O
TER
Atoms:
C4: (21.911,134.203,24.590)
N3: (21.272,133.028,24.923)
OP1: (29.163,133.244,25.732)
OP2: (27.386,134.415,24.313)
C2: (21.748,132.027,25.734)
C1': (23.561,131.225,27.166)
C3': (25.487,130.269,26.203)
O5': (26.745,132.855,26.145)
O4': (24.687,131.771,27.823)
C5': (27.017,131.989,27.264)
P: (27.834,133.890,25.626)
C4': (25.876,131.027,27.457)
C2': (24.023,129.949,26.461)
O2': (23.844,128.870,27.354)
N1: (23.006,132.250,26.266)
O4: (21.339,135.021,23.866)
O2: (21.105,131.020,25.962)
C6: (23.703,133.402,25.964)
C5: (23.213,134.357,25.168)
O3': (26.298,129.112,26.048)
N3: (21.272,133.028,24.923)
OP1: (29.163,133.244,25.732)
OP2: (27.386,134.415,24.313)
C2: (21.748,132.027,25.734)
C1': (23.561,131.225,27.166)
C3': (25.487,130.269,26.203)
O5': (26.745,132.855,26.145)
O4': (24.687,131.771,27.823)
C5': (27.017,131.989,27.264)
P: (27.834,133.890,25.626)
C4': (25.876,131.027,27.457)
C2': (24.023,129.949,26.461)
O2': (23.844,128.870,27.354)
N1: (23.006,132.250,26.266)
O4: (21.339,135.021,23.866)
O2: (21.105,131.020,25.962)
C6: (23.703,133.402,25.964)
C5: (23.213,134.357,25.168)
O3': (26.298,129.112,26.048)
OP1: (19.490,123.466,23.766)
OP2: (17.154,124.328,23.137)
C3': (18.937,127.888,26.129)
C1': (18.879,129.334,24.291)
C5': (20.085,126.138,24.612)
O4': (19.992,128.494,24.086)
C8: (17.601,129.052,22.085)
O2': (17.039,129.397,25.835)
C6: (17.901,132.157,20.463)
C5: (17.869,130.980,21.229)
C4: (18.533,131.003,22.442)
P: (18.629,124.495,23.123)
C4': (20.082,127.540,25.180)
C2': (17.937,128.533,25.181)
C2: (19.174,133.089,22.154)
N1: (18.575,133.215,20.965)
N3: (19.214,132.038,22.968)
N6: (17.305,132.286,19.278)
N7: (17.285,129.739,21.014)
N9: (18.353,129.757,22.993)
O5': (18.930,125.924,23.771)
O3': (19.353,128.915,27.047)
OP2: (17.154,124.328,23.137)
C3': (18.937,127.888,26.129)
C1': (18.879,129.334,24.291)
C5': (20.085,126.138,24.612)
O4': (19.992,128.494,24.086)
C8: (17.601,129.052,22.085)
O2': (17.039,129.397,25.835)
C6: (17.901,132.157,20.463)
C5: (17.869,130.980,21.229)
C4: (18.533,131.003,22.442)
P: (18.629,124.495,23.123)
C4': (20.082,127.540,25.180)
C2': (17.937,128.533,25.181)
C2: (19.174,133.089,22.154)
N1: (18.575,133.215,20.965)
N3: (19.214,132.038,22.968)
N6: (17.305,132.286,19.278)
N7: (17.285,129.739,21.014)
N9: (18.353,129.757,22.993)
O5': (18.930,125.924,23.771)
O3': (19.353,128.915,27.047)
Image (generated by PyMOL):