Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02009:02029
Extra
PDB:
ATOM 1 O3' A A2008 34.490 132.997 104.062 1.00 39.48 O
ATOM 2 P U A2009 34.490 134.522 104.543 1.00 40.44 P
ATOM 3 OP1 U A2009 33.074 134.821 104.864 1.00 41.98 O
ATOM 4 OP2 U A2009 35.224 135.376 103.570 1.00 37.62 O
ATOM 5 O5' U A2009 35.314 134.493 105.906 1.00 40.77 O
ATOM 6 C5' U A2009 36.432 135.373 106.125 1.00 39.21 C
ATOM 7 C4' U A2009 36.806 135.386 107.590 1.00 39.02 C
ATOM 8 O4' U A2009 35.696 135.921 108.362 1.00 39.23 O
ATOM 9 C3' U A2009 37.067 134.024 108.209 1.00 39.08 C
ATOM 10 O3' U A2009 38.387 133.554 107.958 1.00 39.41 O
ATOM 11 C2' U A2009 36.792 134.283 109.685 1.00 38.72 C
ATOM 12 O2' U A2009 37.856 134.931 110.353 1.00 36.91 O
ATOM 13 C1' U A2009 35.593 135.232 109.600 1.00 38.39 C
ATOM 14 N1 U A2009 34.297 134.531 109.640 1.00 37.70 N
ATOM 15 C2 U A2009 33.761 134.239 110.875 1.00 39.85 C
ATOM 16 O2 U A2009 34.300 134.546 111.922 1.00 44.03 O
ATOM 17 N3 U A2009 32.561 133.571 110.847 1.00 41.67 N
ATOM 18 C4 U A2009 31.851 133.177 109.734 1.00 41.22 C
ATOM 19 O4 U A2009 30.801 132.534 109.871 1.00 38.81 O
ATOM 20 C5 U A2009 32.469 133.526 108.494 1.00 41.06 C
ATOM 21 C6 U A2009 33.641 134.171 108.491 1.00 38.24 C
ATOM 22 P U A2010 38.601 132.212 107.105 1.00 41.67 P
ATOM 23 OP1 U A2010 39.323 132.620 105.891 1.00 39.92 O
ATOM 24 OP2 U A2010 37.319 131.491 106.983 1.00 43.36 O
ATOM 25 O5' U A2010 39.526 131.291 108.011 1.00 39.66 O
TER
ATOM 1 O3' G B2028 34.290 133.987 120.678 1.00 42.44 O
ATOM 2 P A B2029 33.165 135.088 120.386 1.00 45.23 P
ATOM 3 OP1 A B2029 33.618 136.356 121.011 1.00 45.35 O
ATOM 4 OP2 A B2029 31.863 134.484 120.780 1.00 48.06 O
ATOM 5 O5' A B2029 33.146 135.262 118.801 1.00 46.55 O
ATOM 6 C5' A B2029 34.207 135.940 118.103 1.00 46.56 C
ATOM 7 C4' A B2029 33.901 135.998 116.620 1.00 47.86 C
ATOM 8 O4' A B2029 33.930 134.658 116.046 1.00 48.11 O
ATOM 9 C3' A B2029 32.519 136.513 116.250 1.00 47.26 C
ATOM 10 O3' A B2029 32.428 137.928 116.283 1.00 47.16 O
ATOM 11 C2' A B2029 32.341 135.949 114.850 1.00 47.49 C
ATOM 12 O2' A B2029 33.081 136.662 113.883 1.00 48.47 O
ATOM 13 C1' A B2029 32.947 134.557 115.022 1.00 46.84 C
ATOM 14 N9 A B2029 31.935 133.595 115.454 1.00 45.75 N
ATOM 15 C8 A B2029 31.547 133.310 116.736 1.00 45.06 C
ATOM 16 N7 A B2029 30.617 132.394 116.815 1.00 45.33 N
ATOM 17 C5 A B2029 30.374 132.052 115.497 1.00 45.94 C
ATOM 18 C6 A B2029 29.498 131.135 114.915 1.00 46.92 C
ATOM 19 N6 A B2029 28.686 130.355 115.619 1.00 49.63 N
ATOM 20 N1 A B2029 29.484 131.039 113.569 1.00 47.75 N
ATOM 21 C2 A B2029 30.308 131.820 112.867 1.00 48.85 C
ATOM 22 N3 A B2029 31.188 132.720 113.303 1.00 48.99 N
ATOM 23 C4 A B2029 31.172 132.787 114.646 1.00 46.56 C
ATOM 24 P C B2030 31.139 138.624 116.943 1.00 48.67 P
ATOM 25 OP1 C B2030 31.614 139.744 117.802 1.00 47.01 O
ATOM 26 OP2 C B2030 30.272 137.555 117.534 1.00 46.21 O
ATOM 27 O5' C B2030 30.384 139.259 115.697 1.00 47.04 O
TER
ATOM 2 P U A2009 34.490 134.522 104.543 1.00 40.44 P
ATOM 3 OP1 U A2009 33.074 134.821 104.864 1.00 41.98 O
ATOM 4 OP2 U A2009 35.224 135.376 103.570 1.00 37.62 O
ATOM 5 O5' U A2009 35.314 134.493 105.906 1.00 40.77 O
ATOM 6 C5' U A2009 36.432 135.373 106.125 1.00 39.21 C
ATOM 7 C4' U A2009 36.806 135.386 107.590 1.00 39.02 C
ATOM 8 O4' U A2009 35.696 135.921 108.362 1.00 39.23 O
ATOM 9 C3' U A2009 37.067 134.024 108.209 1.00 39.08 C
ATOM 10 O3' U A2009 38.387 133.554 107.958 1.00 39.41 O
ATOM 11 C2' U A2009 36.792 134.283 109.685 1.00 38.72 C
ATOM 12 O2' U A2009 37.856 134.931 110.353 1.00 36.91 O
ATOM 13 C1' U A2009 35.593 135.232 109.600 1.00 38.39 C
ATOM 14 N1 U A2009 34.297 134.531 109.640 1.00 37.70 N
ATOM 15 C2 U A2009 33.761 134.239 110.875 1.00 39.85 C
ATOM 16 O2 U A2009 34.300 134.546 111.922 1.00 44.03 O
ATOM 17 N3 U A2009 32.561 133.571 110.847 1.00 41.67 N
ATOM 18 C4 U A2009 31.851 133.177 109.734 1.00 41.22 C
ATOM 19 O4 U A2009 30.801 132.534 109.871 1.00 38.81 O
ATOM 20 C5 U A2009 32.469 133.526 108.494 1.00 41.06 C
ATOM 21 C6 U A2009 33.641 134.171 108.491 1.00 38.24 C
ATOM 22 P U A2010 38.601 132.212 107.105 1.00 41.67 P
ATOM 23 OP1 U A2010 39.323 132.620 105.891 1.00 39.92 O
ATOM 24 OP2 U A2010 37.319 131.491 106.983 1.00 43.36 O
ATOM 25 O5' U A2010 39.526 131.291 108.011 1.00 39.66 O
TER
ATOM 1 O3' G B2028 34.290 133.987 120.678 1.00 42.44 O
ATOM 2 P A B2029 33.165 135.088 120.386 1.00 45.23 P
ATOM 3 OP1 A B2029 33.618 136.356 121.011 1.00 45.35 O
ATOM 4 OP2 A B2029 31.863 134.484 120.780 1.00 48.06 O
ATOM 5 O5' A B2029 33.146 135.262 118.801 1.00 46.55 O
ATOM 6 C5' A B2029 34.207 135.940 118.103 1.00 46.56 C
ATOM 7 C4' A B2029 33.901 135.998 116.620 1.00 47.86 C
ATOM 8 O4' A B2029 33.930 134.658 116.046 1.00 48.11 O
ATOM 9 C3' A B2029 32.519 136.513 116.250 1.00 47.26 C
ATOM 10 O3' A B2029 32.428 137.928 116.283 1.00 47.16 O
ATOM 11 C2' A B2029 32.341 135.949 114.850 1.00 47.49 C
ATOM 12 O2' A B2029 33.081 136.662 113.883 1.00 48.47 O
ATOM 13 C1' A B2029 32.947 134.557 115.022 1.00 46.84 C
ATOM 14 N9 A B2029 31.935 133.595 115.454 1.00 45.75 N
ATOM 15 C8 A B2029 31.547 133.310 116.736 1.00 45.06 C
ATOM 16 N7 A B2029 30.617 132.394 116.815 1.00 45.33 N
ATOM 17 C5 A B2029 30.374 132.052 115.497 1.00 45.94 C
ATOM 18 C6 A B2029 29.498 131.135 114.915 1.00 46.92 C
ATOM 19 N6 A B2029 28.686 130.355 115.619 1.00 49.63 N
ATOM 20 N1 A B2029 29.484 131.039 113.569 1.00 47.75 N
ATOM 21 C2 A B2029 30.308 131.820 112.867 1.00 48.85 C
ATOM 22 N3 A B2029 31.188 132.720 113.303 1.00 48.99 N
ATOM 23 C4 A B2029 31.172 132.787 114.646 1.00 46.56 C
ATOM 24 P C B2030 31.139 138.624 116.943 1.00 48.67 P
ATOM 25 OP1 C B2030 31.614 139.744 117.802 1.00 47.01 O
ATOM 26 OP2 C B2030 30.272 137.555 117.534 1.00 46.21 O
ATOM 27 O5' C B2030 30.384 139.259 115.697 1.00 47.04 O
TER
Atoms:
C4: (31.851,133.177,109.734)
N3: (32.561,133.571,110.847)
OP1: (33.074,134.821,104.864)
OP2: (35.224,135.376,103.570)
C2: (33.761,134.239,110.875)
C1': (35.593,135.232,109.600)
C3': (37.067,134.024,108.209)
O5': (35.314,134.493,105.906)
O4': (35.696,135.921,108.362)
C5': (36.432,135.373,106.125)
P: (34.490,134.522,104.543)
C4': (36.806,135.386,107.590)
C2': (36.792,134.283,109.685)
O2': (37.856,134.931,110.353)
N1: (34.297,134.531,109.640)
O4: (30.801,132.534,109.871)
O2: (34.300,134.546,111.922)
C6: (33.641,134.171,108.491)
C5: (32.469,133.526,108.494)
O3': (38.387,133.554,107.958)
N3: (32.561,133.571,110.847)
OP1: (33.074,134.821,104.864)
OP2: (35.224,135.376,103.570)
C2: (33.761,134.239,110.875)
C1': (35.593,135.232,109.600)
C3': (37.067,134.024,108.209)
O5': (35.314,134.493,105.906)
O4': (35.696,135.921,108.362)
C5': (36.432,135.373,106.125)
P: (34.490,134.522,104.543)
C4': (36.806,135.386,107.590)
C2': (36.792,134.283,109.685)
O2': (37.856,134.931,110.353)
N1: (34.297,134.531,109.640)
O4: (30.801,132.534,109.871)
O2: (34.300,134.546,111.922)
C6: (33.641,134.171,108.491)
C5: (32.469,133.526,108.494)
O3': (38.387,133.554,107.958)
OP1: (33.618,136.356,121.011)
OP2: (31.863,134.484,120.780)
C3': (32.519,136.513,116.250)
C1': (32.947,134.557,115.022)
C5': (34.207,135.940,118.103)
O4': (33.930,134.658,116.046)
C8: (31.547,133.310,116.736)
O2': (33.081,136.662,113.883)
C6: (29.498,131.135,114.915)
C5: (30.374,132.052,115.497)
C4: (31.172,132.787,114.646)
P: (33.165,135.088,120.386)
C4': (33.901,135.998,116.620)
C2': (32.341,135.949,114.850)
C2: (30.308,131.820,112.867)
N1: (29.484,131.039,113.569)
N3: (31.188,132.720,113.303)
N6: (28.686,130.355,115.619)
N7: (30.617,132.394,116.815)
N9: (31.935,133.595,115.454)
O5': (33.146,135.262,118.801)
O3': (32.428,137.928,116.283)
OP2: (31.863,134.484,120.780)
C3': (32.519,136.513,116.250)
C1': (32.947,134.557,115.022)
C5': (34.207,135.940,118.103)
O4': (33.930,134.658,116.046)
C8: (31.547,133.310,116.736)
O2': (33.081,136.662,113.883)
C6: (29.498,131.135,114.915)
C5: (30.374,132.052,115.497)
C4: (31.172,132.787,114.646)
P: (33.165,135.088,120.386)
C4': (33.901,135.998,116.620)
C2': (32.341,135.949,114.850)
C2: (30.308,131.820,112.867)
N1: (29.484,131.039,113.569)
N3: (31.188,132.720,113.303)
N6: (28.686,130.355,115.619)
N7: (30.617,132.394,116.815)
N9: (31.935,133.595,115.454)
O5': (33.146,135.262,118.801)
O3': (32.428,137.928,116.283)
Image (generated by PyMOL):