Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0334:0317
Extra
PDB:
ATOM 1 O3' G A 333 27.669 135.212 26.591 1.00 48.45 O
ATOM 2 P U A 334 27.730 134.001 25.543 1.00 50.71 P
ATOM 3 OP1 U A 334 29.066 133.373 25.657 1.00 51.93 O
ATOM 4 OP2 U A 334 27.275 134.499 24.228 1.00 51.61 O
ATOM 5 O5' U A 334 26.647 132.968 26.080 1.00 51.24 O
ATOM 6 C5' U A 334 26.956 132.061 27.152 1.00 51.67 C
ATOM 7 C4' U A 334 25.828 131.086 27.336 1.00 52.09 C
ATOM 8 O4' U A 334 24.636 131.817 27.718 1.00 52.87 O
ATOM 9 C3' U A 334 25.445 130.342 26.071 1.00 52.18 C
ATOM 10 O3' U A 334 26.261 129.188 25.896 1.00 51.13 O
ATOM 11 C2' U A 334 23.974 130.027 26.306 1.00 54.42 C
ATOM 12 O2' U A 334 23.755 128.910 27.149 1.00 55.60 O
ATOM 13 C1' U A 334 23.515 131.293 27.035 1.00 54.77 C
ATOM 14 N1 U A 334 22.991 132.344 26.149 1.00 57.98 N
ATOM 15 C2 U A 334 21.741 132.151 25.591 1.00 60.12 C
ATOM 16 O2 U A 334 21.075 131.152 25.798 1.00 62.40 O
ATOM 17 N3 U A 334 21.298 133.172 24.782 1.00 60.37 N
ATOM 18 C4 U A 334 21.965 134.339 24.479 1.00 60.07 C
ATOM 19 O4 U A 334 21.433 135.166 23.735 1.00 59.00 O
ATOM 20 C5 U A 334 23.253 134.464 25.091 1.00 60.19 C
ATOM 21 C6 U A 334 23.710 133.488 25.883 1.00 59.01 C
ATOM 22 P A A 335 26.824 128.828 24.438 1.00 51.82 P
ATOM 23 OP1 A A 335 27.867 127.773 24.537 1.00 50.18 O
ATOM 24 OP2 A A 335 27.154 130.114 23.790 1.00 52.24 O
ATOM 25 O5' A A 335 25.566 128.192 23.696 1.00 53.16 O
TER
ATOM 1 O3' U B 316 19.083 124.707 21.512 1.00 55.08 O
ATOM 2 P A B 317 18.610 124.627 23.051 1.00 56.28 P
ATOM 3 OP1 A B 317 19.475 123.618 23.717 1.00 53.30 O
ATOM 4 OP2 A B 317 17.134 124.452 23.066 1.00 55.62 O
ATOM 5 O5' A B 317 18.899 126.075 23.660 1.00 54.80 O
ATOM 6 C5' A B 317 20.086 126.328 24.439 1.00 53.74 C
ATOM 7 C4' A B 317 20.058 127.719 25.028 1.00 52.01 C
ATOM 8 O4' A B 317 19.958 128.683 23.945 1.00 52.44 O
ATOM 9 C3' A B 317 18.907 128.033 25.981 1.00 51.49 C
ATOM 10 O3' A B 317 19.315 129.025 26.937 1.00 52.91 O
ATOM 11 C2' A B 317 17.907 128.703 25.048 1.00 51.35 C
ATOM 12 O2' A B 317 17.010 129.556 25.725 1.00 50.11 O
ATOM 13 C1' A B 317 18.849 129.522 24.172 1.00 52.75 C
ATOM 14 N9 A B 317 18.323 129.977 22.883 1.00 55.40 N
ATOM 15 C8 A B 317 17.571 129.288 21.960 1.00 56.01 C
ATOM 16 N7 A B 317 17.241 130.000 20.910 1.00 56.10 N
ATOM 17 C5 A B 317 17.818 131.241 21.152 1.00 56.21 C
ATOM 18 C6 A B 317 17.835 132.440 20.415 1.00 55.45 C
ATOM 19 N6 A B 317 17.233 132.596 19.234 1.00 53.70 N
ATOM 20 N1 A B 317 18.504 133.489 20.940 1.00 55.66 N
ATOM 21 C2 A B 317 19.114 133.334 22.121 1.00 55.78 C
ATOM 22 N3 A B 317 19.171 132.264 22.906 1.00 55.97 N
ATOM 23 C4 A B 317 18.494 131.238 22.360 1.00 56.42 C
ATOM 24 P C B 318 20.086 128.602 28.290 1.00 52.43 P
ATOM 25 OP1 C B 318 20.087 129.798 29.168 1.00 50.18 O
ATOM 26 OP2 C B 318 21.376 127.949 27.911 1.00 50.72 O
ATOM 27 O5' C B 318 19.160 127.523 29.006 1.00 52.32 O
TER
ATOM 2 P U A 334 27.730 134.001 25.543 1.00 50.71 P
ATOM 3 OP1 U A 334 29.066 133.373 25.657 1.00 51.93 O
ATOM 4 OP2 U A 334 27.275 134.499 24.228 1.00 51.61 O
ATOM 5 O5' U A 334 26.647 132.968 26.080 1.00 51.24 O
ATOM 6 C5' U A 334 26.956 132.061 27.152 1.00 51.67 C
ATOM 7 C4' U A 334 25.828 131.086 27.336 1.00 52.09 C
ATOM 8 O4' U A 334 24.636 131.817 27.718 1.00 52.87 O
ATOM 9 C3' U A 334 25.445 130.342 26.071 1.00 52.18 C
ATOM 10 O3' U A 334 26.261 129.188 25.896 1.00 51.13 O
ATOM 11 C2' U A 334 23.974 130.027 26.306 1.00 54.42 C
ATOM 12 O2' U A 334 23.755 128.910 27.149 1.00 55.60 O
ATOM 13 C1' U A 334 23.515 131.293 27.035 1.00 54.77 C
ATOM 14 N1 U A 334 22.991 132.344 26.149 1.00 57.98 N
ATOM 15 C2 U A 334 21.741 132.151 25.591 1.00 60.12 C
ATOM 16 O2 U A 334 21.075 131.152 25.798 1.00 62.40 O
ATOM 17 N3 U A 334 21.298 133.172 24.782 1.00 60.37 N
ATOM 18 C4 U A 334 21.965 134.339 24.479 1.00 60.07 C
ATOM 19 O4 U A 334 21.433 135.166 23.735 1.00 59.00 O
ATOM 20 C5 U A 334 23.253 134.464 25.091 1.00 60.19 C
ATOM 21 C6 U A 334 23.710 133.488 25.883 1.00 59.01 C
ATOM 22 P A A 335 26.824 128.828 24.438 1.00 51.82 P
ATOM 23 OP1 A A 335 27.867 127.773 24.537 1.00 50.18 O
ATOM 24 OP2 A A 335 27.154 130.114 23.790 1.00 52.24 O
ATOM 25 O5' A A 335 25.566 128.192 23.696 1.00 53.16 O
TER
ATOM 1 O3' U B 316 19.083 124.707 21.512 1.00 55.08 O
ATOM 2 P A B 317 18.610 124.627 23.051 1.00 56.28 P
ATOM 3 OP1 A B 317 19.475 123.618 23.717 1.00 53.30 O
ATOM 4 OP2 A B 317 17.134 124.452 23.066 1.00 55.62 O
ATOM 5 O5' A B 317 18.899 126.075 23.660 1.00 54.80 O
ATOM 6 C5' A B 317 20.086 126.328 24.439 1.00 53.74 C
ATOM 7 C4' A B 317 20.058 127.719 25.028 1.00 52.01 C
ATOM 8 O4' A B 317 19.958 128.683 23.945 1.00 52.44 O
ATOM 9 C3' A B 317 18.907 128.033 25.981 1.00 51.49 C
ATOM 10 O3' A B 317 19.315 129.025 26.937 1.00 52.91 O
ATOM 11 C2' A B 317 17.907 128.703 25.048 1.00 51.35 C
ATOM 12 O2' A B 317 17.010 129.556 25.725 1.00 50.11 O
ATOM 13 C1' A B 317 18.849 129.522 24.172 1.00 52.75 C
ATOM 14 N9 A B 317 18.323 129.977 22.883 1.00 55.40 N
ATOM 15 C8 A B 317 17.571 129.288 21.960 1.00 56.01 C
ATOM 16 N7 A B 317 17.241 130.000 20.910 1.00 56.10 N
ATOM 17 C5 A B 317 17.818 131.241 21.152 1.00 56.21 C
ATOM 18 C6 A B 317 17.835 132.440 20.415 1.00 55.45 C
ATOM 19 N6 A B 317 17.233 132.596 19.234 1.00 53.70 N
ATOM 20 N1 A B 317 18.504 133.489 20.940 1.00 55.66 N
ATOM 21 C2 A B 317 19.114 133.334 22.121 1.00 55.78 C
ATOM 22 N3 A B 317 19.171 132.264 22.906 1.00 55.97 N
ATOM 23 C4 A B 317 18.494 131.238 22.360 1.00 56.42 C
ATOM 24 P C B 318 20.086 128.602 28.290 1.00 52.43 P
ATOM 25 OP1 C B 318 20.087 129.798 29.168 1.00 50.18 O
ATOM 26 OP2 C B 318 21.376 127.949 27.911 1.00 50.72 O
ATOM 27 O5' C B 318 19.160 127.523 29.006 1.00 52.32 O
TER
Atoms:
C4: (21.965,134.339,24.479)
N3: (21.298,133.172,24.782)
OP1: (29.066,133.373,25.657)
OP2: (27.275,134.499,24.228)
C2: (21.741,132.151,25.591)
C1': (23.515,131.293,27.035)
C3': (25.445,130.342,26.071)
O5': (26.647,132.968,26.080)
O4': (24.636,131.817,27.718)
C5': (26.956,132.061,27.152)
P: (27.730,134.001,25.543)
C4': (25.828,131.086,27.336)
C2': (23.974,130.027,26.306)
O2': (23.755,128.910,27.149)
N1: (22.991,132.344,26.149)
O4: (21.433,135.166,23.735)
O2: (21.075,131.152,25.798)
C6: (23.710,133.488,25.883)
C5: (23.253,134.464,25.091)
O3': (26.261,129.188,25.896)
N3: (21.298,133.172,24.782)
OP1: (29.066,133.373,25.657)
OP2: (27.275,134.499,24.228)
C2: (21.741,132.151,25.591)
C1': (23.515,131.293,27.035)
C3': (25.445,130.342,26.071)
O5': (26.647,132.968,26.080)
O4': (24.636,131.817,27.718)
C5': (26.956,132.061,27.152)
P: (27.730,134.001,25.543)
C4': (25.828,131.086,27.336)
C2': (23.974,130.027,26.306)
O2': (23.755,128.910,27.149)
N1: (22.991,132.344,26.149)
O4: (21.433,135.166,23.735)
O2: (21.075,131.152,25.798)
C6: (23.710,133.488,25.883)
C5: (23.253,134.464,25.091)
O3': (26.261,129.188,25.896)
OP1: (19.475,123.618,23.717)
OP2: (17.134,124.452,23.066)
C3': (18.907,128.033,25.981)
C1': (18.849,129.522,24.172)
C5': (20.086,126.328,24.439)
O4': (19.958,128.683,23.945)
C8: (17.571,129.288,21.960)
O2': (17.010,129.556,25.725)
C6: (17.835,132.440,20.415)
C5: (17.818,131.241,21.152)
C4: (18.494,131.238,22.360)
P: (18.610,124.627,23.051)
C4': (20.058,127.719,25.028)
C2': (17.907,128.703,25.048)
C2: (19.114,133.334,22.121)
N1: (18.504,133.489,20.940)
N3: (19.171,132.264,22.906)
N6: (17.233,132.596,19.234)
N7: (17.241,130.000,20.910)
N9: (18.323,129.977,22.883)
O5': (18.899,126.075,23.660)
O3': (19.315,129.025,26.937)
OP2: (17.134,124.452,23.066)
C3': (18.907,128.033,25.981)
C1': (18.849,129.522,24.172)
C5': (20.086,126.328,24.439)
O4': (19.958,128.683,23.945)
C8: (17.571,129.288,21.960)
O2': (17.010,129.556,25.725)
C6: (17.835,132.440,20.415)
C5: (17.818,131.241,21.152)
C4: (18.494,131.238,22.360)
P: (18.610,124.627,23.051)
C4': (20.058,127.719,25.028)
C2': (17.907,128.703,25.048)
C2: (19.114,133.334,22.121)
N1: (18.504,133.489,20.940)
N3: (19.171,132.264,22.906)
N6: (17.233,132.596,19.234)
N7: (17.241,130.000,20.910)
N9: (18.323,129.977,22.883)
O5': (18.899,126.075,23.660)
O3': (19.315,129.025,26.937)
Image (generated by PyMOL):