ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:02009:02029

Extra

PDB:
ATOM 1 O3' A A2008 34.130 132.691 103.696 1.00 31.25 O
ATOM 2 P U A2009 34.281 134.189 104.256 1.00 32.22 P
ATOM 3 OP1 U A2009 32.945 134.648 104.695 1.00 31.66 O
ATOM 4 OP2 U A2009 35.041 134.991 103.264 1.00 32.75 O
ATOM 5 O5' U A2009 35.183 134.026 105.557 1.00 31.92 O
ATOM 6 C5' U A2009 36.186 134.997 105.885 1.00 31.38 C
ATOM 7 C4' U A2009 36.512 134.935 107.355 1.00 33.13 C
ATOM 8 O4' U A2009 35.399 135.445 108.132 1.00 33.41 O
ATOM 9 C3' U A2009 36.748 133.544 107.912 1.00 33.84 C
ATOM 10 O3' U A2009 38.063 133.078 107.629 1.00 34.39 O
ATOM 11 C2' U A2009 36.482 133.749 109.400 1.00 34.50 C
ATOM 12 O2' U A2009 37.545 134.349 110.110 1.00 34.95 O
ATOM 13 C1' U A2009 35.313 134.735 109.359 1.00 34.92 C
ATOM 14 N1 U A2009 34.007 134.059 109.422 1.00 35.83 N
ATOM 15 C2 U A2009 33.459 133.824 110.670 1.00 35.28 C
ATOM 16 O2 U A2009 34.007 134.146 111.708 1.00 37.18 O
ATOM 17 N3 U A2009 32.244 133.191 110.658 1.00 35.37 N
ATOM 18 C4 U A2009 31.537 132.769 109.555 1.00 36.41 C
ATOM 19 O4 U A2009 30.479 132.162 109.710 1.00 36.58 O
ATOM 20 C5 U A2009 32.166 133.044 108.304 1.00 37.69 C
ATOM 21 C6 U A2009 33.348 133.664 108.279 1.00 36.76 C
ATOM 22 P U A2010 38.271 131.740 106.761 1.00 34.29 P
ATOM 23 OP1 U A2010 38.909 132.146 105.488 1.00 34.92 O
ATOM 24 OP2 U A2010 37.008 130.987 106.732 1.00 37.70 O
ATOM 25 O5' U A2010 39.295 130.875 107.618 1.00 33.72 O
TER

ATOM 1 O3' G B2028 34.143 133.569 120.216 1.00 37.45 O
ATOM 2 P A B2029 32.974 134.637 119.964 1.00 37.60 P
ATOM 3 OP1 A B2029 33.441 135.912 120.551 1.00 37.61 O
ATOM 4 OP2 A B2029 31.693 134.039 120.417 1.00 39.49 O
ATOM 5 O5' A B2029 32.904 134.797 118.381 1.00 38.27 O
ATOM 6 C5' A B2029 33.944 135.474 117.655 1.00 38.81 C
ATOM 7 C4' A B2029 33.596 135.535 116.189 1.00 39.98 C
ATOM 8 O4' A B2029 33.608 134.195 115.626 1.00 39.14 O
ATOM 9 C3' A B2029 32.196 136.041 115.888 1.00 40.59 C
ATOM 10 O3' A B2029 32.100 137.457 115.929 1.00 42.22 O
ATOM 11 C2' A B2029 31.950 135.466 114.503 1.00 40.52 C
ATOM 12 O2' A B2029 32.623 136.185 113.490 1.00 39.82 O
ATOM 13 C1' A B2029 32.579 134.080 114.653 1.00 39.73 C
ATOM 14 N9 A B2029 31.600 133.097 115.123 1.00 40.23 N
ATOM 15 C8 A B2029 31.265 132.787 116.416 1.00 39.98 C
ATOM 16 N7 A B2029 30.333 131.874 116.516 1.00 40.25 N
ATOM 17 C5 A B2029 30.034 131.557 115.198 1.00 40.80 C
ATOM 18 C6 A B2029 29.121 130.652 114.622 1.00 41.98 C
ATOM 19 N6 A B2029 28.318 129.854 115.328 1.00 44.49 N
ATOM 20 N1 A B2029 29.066 130.586 113.275 1.00 41.51 N
ATOM 21 C2 A B2029 29.877 131.367 112.568 1.00 41.23 C
ATOM 22 N3 A B2029 30.778 132.249 112.989 1.00 42.32 N
ATOM 23 C4 A B2029 30.807 132.299 114.331 1.00 40.59 C
ATOM 24 P C B2030 30.797 138.148 116.570 1.00 42.84 P
ATOM 25 OP1 C B2030 31.254 139.265 117.436 1.00 42.47 O
ATOM 26 OP2 C B2030 29.945 137.072 117.145 1.00 42.35 O
ATOM 27 O5' C B2030 30.035 138.780 115.322 1.00 41.83 O
TER

Atoms:
C4: (31.537,132.769,109.555)
N3: (32.244,133.191,110.658)
OP1: (32.945,134.648,104.695)
OP2: (35.041,134.991,103.264)
C2: (33.459,133.824,110.670)
C1': (35.313,134.735,109.359)
C3': (36.748,133.544,107.912)
O5': (35.183,134.026,105.557)
O4': (35.399,135.445,108.132)
C5': (36.186,134.997,105.885)
P: (34.281,134.189,104.256)
C4': (36.512,134.935,107.355)
C2': (36.482,133.749,109.400)
O2': (37.545,134.349,110.110)
N1: (34.007,134.059,109.422)
O4: (30.479,132.162,109.710)
O2: (34.007,134.146,111.708)
C6: (33.348,133.664,108.279)
C5: (32.166,133.044,108.304)
O3': (38.063,133.078,107.629)
OP1: (33.441,135.912,120.551)
OP2: (31.693,134.039,120.417)
C3': (32.196,136.041,115.888)
C1': (32.579,134.080,114.653)
C5': (33.944,135.474,117.655)
O4': (33.608,134.195,115.626)
C8: (31.265,132.787,116.416)
O2': (32.623,136.185,113.490)
C6: (29.121,130.652,114.622)
C5: (30.034,131.557,115.198)
C4: (30.807,132.299,114.331)
P: (32.974,134.637,119.964)
C4': (33.596,135.535,116.189)
C2': (31.950,135.466,114.503)
C2: (29.877,131.367,112.568)
N1: (29.066,130.586,113.275)
N3: (30.778,132.249,112.989)
N6: (28.318,129.854,115.328)
N7: (30.333,131.874,116.516)
N9: (31.600,133.097,115.123)
O5': (32.904,134.797,118.381)
O3': (32.100,137.457,115.929)
Image (generated by PyMOL):
PyMOL image
show in jmol