ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A351:A334

Extra

PDB:
ATOM 1 O3' G A 350 -47.097 -98.226 69.513 1.00 9.48 O
ATOM 2 P U A 351 -47.826 -97.987 70.923 1.00 23.60 P
ATOM 3 OP1 U A 351 -48.250 -96.560 70.998 1.00 55.76 O
ATOM 4 OP2 U A 351 -46.944 -98.543 71.982 1.00 55.76 O
ATOM 5 O5' U A 351 -49.126 -98.891 70.837 1.00 6.99 O
ATOM 6 C5' U A 351 -50.302 -98.412 70.187 1.00 6.99 C
ATOM 7 C4' U A 351 -51.476 -99.309 70.508 1.00 6.99 C
ATOM 8 O4' U A 351 -51.177-100.643 70.034 1.00 6.99 O
ATOM 9 C3' U A 351 -51.787 -99.471 71.991 1.00 6.99 C
ATOM 10 O3' U A 351 -52.688 -98.472 72.453 1.00 6.99 O
ATOM 11 C2' U A 351 -52.419-100.850 72.056 1.00 6.99 C
ATOM 12 O2' U A 351 -53.789-100.800 71.726 1.00 6.99 O
ATOM 13 C1' U A 351 -51.632-101.598 70.974 1.00 6.99 C
ATOM 14 N1 U A 351 -50.444-102.292 71.500 1.00 40.16 N
ATOM 15 C2 U A 351 -50.628-103.486 72.170 1.00 40.16 C
ATOM 16 O2 U A 351 -51.728-103.980 72.350 1.00 40.16 O
ATOM 17 N3 U A 351 -49.475-104.077 72.630 1.00 40.16 N
ATOM 18 C4 U A 351 -48.181-103.604 72.503 1.00 40.16 C
ATOM 19 O4 U A 351 -47.244-104.236 73.010 1.00 40.16 O
ATOM 20 C5 U A 351 -48.074-102.364 71.800 1.00 40.16 C
ATOM 21 C6 U A 351 -49.177-101.766 71.333 1.00 40.16 C
ATOM 22 P A A 352 -52.431 -97.773 73.872 1.00 56.53 P
ATOM 23 OP1 A A 352 -53.386 -96.642 73.950 1.00 38.11 O
ATOM 24 OP2 A A 352 -50.963 -97.521 74.045 1.00 38.11 O
ATOM 25 O5' A A 352 -52.916 -98.873 74.911 1.00 23.27 O
TER

ATOM 1 O3' G B 333 -56.441-105.164 78.616 1.00 37.96 O
ATOM 2 P A B 334 -56.998-105.683 77.207 1.00 25.28 P
ATOM 3 OP1 A B 334 -58.025-104.707 76.774 1.00 35.05 O
ATOM 4 OP2 A B 334 -57.379-107.097 77.398 1.00 34.49 O
ATOM 5 O5' A B 334 -55.744-105.589 76.223 1.00 43.01 O
ATOM 6 C5' A B 334 -55.543-104.425 75.395 1.00 43.01 C
ATOM 7 C4' A B 334 -54.480-104.689 74.354 1.00 43.01 C
ATOM 8 O4' A B 334 -53.220-104.929 75.031 1.00 43.01 O
ATOM 9 C3' A B 334 -54.722-105.885 73.430 1.00 43.01 C
ATOM 10 O3' A B 334 -54.131-105.644 72.135 1.00 43.01 O
ATOM 11 C2' A B 334 -53.872-106.971 74.089 1.00 43.01 C
ATOM 12 O2' A B 334 -53.424-107.960 73.190 1.00 43.01 O
ATOM 13 C1' A B 334 -52.682-106.151 74.585 1.00 43.01 C
ATOM 14 N9 A B 334 -51.860-106.732 75.650 1.00 18.35 N
ATOM 15 C8 A B 334 -52.227-107.395 76.800 1.00 18.27 C
ATOM 16 N7 A B 334 -51.209-107.772 77.539 1.00 18.37 N
ATOM 17 C5 A B 334 -50.102-107.333 76.827 1.00 18.42 C
ATOM 18 C6 A B 334 -48.716-107.418 77.073 1.00 18.40 C
ATOM 19 N6 A B 334 -48.177-108.009 78.144 1.00 18.41 N
ATOM 20 N1 A B 334 -47.886-106.865 76.165 1.00 18.27 N
ATOM 21 C2 A B 334 -48.415-106.271 75.089 1.00 18.29 C
ATOM 22 N3 A B 334 -49.690-106.134 74.746 1.00 18.36 N
ATOM 23 C4 A B 334 -50.490-106.691 75.666 1.00 18.40 C
ATOM 24 P G B 335 -54.920-104.819 70.988 1.00 33.22 P
ATOM 25 OP1 G B 335 -54.164-105.067 69.733 1.00 21.76 O
ATOM 26 OP2 G B 335 -55.150-103.427 71.443 1.00 21.60 O
ATOM 27 O5' G B 335 -56.336-105.522 70.847 1.00 25.73 O
TER

Atoms:
C4: (-48.181,-103.604,72.503)
N3: (-49.475,-104.077,72.630)
OP1: (-48.250,-96.560,70.998)
OP2: (-46.944,-98.543,71.982)
C2: (-50.628,-103.486,72.170)
C1': (-51.632,-101.598,70.974)
C3': (-51.787,-99.471,71.991)
O5': (-49.126,-98.891,70.837)
O4': (-51.177,-100.643,70.034)
C5': (-50.302,-98.412,70.187)
P: (-47.826,-97.987,70.923)
C4': (-51.476,-99.309,70.508)
C2': (-52.419,-100.850,72.056)
O2': (-53.789,-100.800,71.726)
N1: (-50.444,-102.292,71.500)
O4: (-47.244,-104.236,73.010)
O2: (-51.728,-103.980,72.350)
C6: (-49.177,-101.766,71.333)
C5: (-48.074,-102.364,71.800)
O3': (-52.688,-98.472,72.453)
OP1: (-58.025,-104.707,76.774)
OP2: (-57.379,-107.097,77.398)
C3': (-54.722,-105.885,73.430)
C1': (-52.682,-106.151,74.585)
C5': (-55.543,-104.425,75.395)
O4': (-53.220,-104.929,75.031)
C8: (-52.227,-107.395,76.800)
O2': (-53.424,-107.960,73.190)
C6: (-48.716,-107.418,77.073)
C5: (-50.102,-107.333,76.827)
C4: (-50.490,-106.691,75.666)
P: (-56.998,-105.683,77.207)
C4': (-54.480,-104.689,74.354)
C2': (-53.872,-106.971,74.089)
C2: (-48.415,-106.271,75.089)
N1: (-47.886,-106.865,76.165)
N3: (-49.690,-106.134,74.746)
N6: (-48.177,-108.009,78.144)
N7: (-51.209,-107.772,77.539)
N9: (-51.860,-106.732,75.650)
O5': (-55.744,-105.589,76.223)
O3': (-54.131,-105.644,72.135)
Image (generated by PyMOL):
PyMOL image
show in jmol