Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XNZ:A33:A60
Extra
PDB:
ATOM 1 O3' U A 32 3.570 -3.529 22.921 1.00 44.25 O
ATOM 2 P U A 33 4.724 -4.293 22.110 1.00 43.69 P
ATOM 3 OP1 U A 33 4.458 -5.749 22.183 1.00 42.73 O
ATOM 4 OP2 U A 33 6.035 -3.759 22.561 1.00 43.74 O
ATOM 5 O5' U A 33 4.529 -3.791 20.605 1.00 41.66 O
ATOM 6 C5' U A 33 3.434 -4.220 19.794 1.00 38.69 C
ATOM 7 C4' U A 33 3.723 -3.909 18.337 1.00 36.44 C
ATOM 8 O4' U A 33 3.590 -2.491 18.079 1.00 34.94 O
ATOM 9 C3' U A 33 5.131 -4.290 17.900 1.00 36.82 C
ATOM 10 O3' U A 33 5.007 -5.035 16.716 1.00 38.50 O
ATOM 11 C2' U A 33 5.841 -2.948 17.690 1.00 35.15 C
ATOM 12 O2' U A 33 6.841 -2.985 16.685 1.00 35.28 O
ATOM 13 C1' U A 33 4.666 -2.071 17.264 1.00 33.53 C
ATOM 14 N1 U A 33 4.865 -0.593 17.438 1.00 31.01 N
ATOM 15 C2 U A 33 4.509 0.234 16.394 1.00 29.33 C
ATOM 16 O2 U A 33 4.049 -0.190 15.352 1.00 29.28 O
ATOM 17 N3 U A 33 4.719 1.573 16.615 1.00 28.97 N
ATOM 18 C4 U A 33 5.235 2.162 17.759 1.00 28.13 C
ATOM 19 O4 U A 33 5.363 3.383 17.818 1.00 27.23 O
ATOM 20 C5 U A 33 5.585 1.234 18.807 1.00 29.02 C
ATOM 21 C6 U A 33 5.393 -0.081 18.612 1.00 29.67 C
ATOM 22 P C A 34 6.095 -6.145 16.405 1.00 40.31 P
ATOM 23 OP1 C A 34 5.823 -7.306 17.288 1.00 41.68 O
ATOM 24 OP2 C A 34 7.425 -5.486 16.399 1.00 41.18 O
ATOM 25 O5' C A 34 5.782 -6.524 14.893 1.00 40.31 O
TER
ATOM 1 O3' U B 59 5.312 0.087 6.736 1.00 30.44 O
ATOM 2 P A B 60 3.894 0.813 6.889 1.00 30.79 P
ATOM 3 OP1 A B 60 2.946 -0.024 6.117 1.00 31.52 O
ATOM 4 OP2 A B 60 4.015 2.258 6.609 1.00 29.22 O
ATOM 5 O5' A B 60 3.603 0.674 8.451 1.00 31.10 O
ATOM 6 C5' A B 60 3.341 -0.574 9.058 1.00 31.53 C
ATOM 7 C4' A B 60 3.175 -0.377 10.554 1.00 32.13 C
ATOM 8 O4' A B 60 4.421 0.104 11.119 1.00 31.10 O
ATOM 9 C3' A B 60 2.170 0.685 10.981 1.00 32.86 C
ATOM 10 O3' A B 60 0.842 0.203 10.888 1.00 35.23 O
ATOM 11 C2' A B 60 2.619 0.968 12.410 1.00 31.90 C
ATOM 12 O2' A B 60 2.279 -0.081 13.296 1.00 32.03 O
ATOM 13 C1' A B 60 4.135 0.992 12.191 1.00 30.43 C
ATOM 14 N9 A B 60 4.695 2.306 11.888 1.00 28.26 N
ATOM 15 C8 A B 60 5.033 2.816 10.657 1.00 28.42 C
ATOM 16 N7 A B 60 5.530 4.031 10.712 1.00 28.12 N
ATOM 17 C5 A B 60 5.528 4.333 12.069 1.00 27.10 C
ATOM 18 C6 A B 60 5.937 5.473 12.799 1.00 27.69 C
ATOM 19 N6 A B 60 6.450 6.566 12.220 1.00 27.80 N
ATOM 20 N1 A B 60 5.796 5.451 14.149 1.00 25.89 N
ATOM 21 C2 A B 60 5.286 4.352 14.725 1.00 26.79 C
ATOM 22 N3 A B 60 4.874 3.221 14.149 1.00 26.64 N
ATOM 23 C4 A B 60 5.023 3.275 12.808 1.00 28.26 C
ATOM 24 P U B 61 -0.338 1.196 10.471 1.00 36.55 P
ATOM 25 OP1 U B 61 -1.523 0.328 10.245 1.00 38.56 O
ATOM 26 OP2 U B 61 0.107 2.146 9.423 1.00 36.74 O
ATOM 27 O5' U B 61 -0.539 2.072 11.776 1.00 37.47 O
TER
ATOM 2 P U A 33 4.724 -4.293 22.110 1.00 43.69 P
ATOM 3 OP1 U A 33 4.458 -5.749 22.183 1.00 42.73 O
ATOM 4 OP2 U A 33 6.035 -3.759 22.561 1.00 43.74 O
ATOM 5 O5' U A 33 4.529 -3.791 20.605 1.00 41.66 O
ATOM 6 C5' U A 33 3.434 -4.220 19.794 1.00 38.69 C
ATOM 7 C4' U A 33 3.723 -3.909 18.337 1.00 36.44 C
ATOM 8 O4' U A 33 3.590 -2.491 18.079 1.00 34.94 O
ATOM 9 C3' U A 33 5.131 -4.290 17.900 1.00 36.82 C
ATOM 10 O3' U A 33 5.007 -5.035 16.716 1.00 38.50 O
ATOM 11 C2' U A 33 5.841 -2.948 17.690 1.00 35.15 C
ATOM 12 O2' U A 33 6.841 -2.985 16.685 1.00 35.28 O
ATOM 13 C1' U A 33 4.666 -2.071 17.264 1.00 33.53 C
ATOM 14 N1 U A 33 4.865 -0.593 17.438 1.00 31.01 N
ATOM 15 C2 U A 33 4.509 0.234 16.394 1.00 29.33 C
ATOM 16 O2 U A 33 4.049 -0.190 15.352 1.00 29.28 O
ATOM 17 N3 U A 33 4.719 1.573 16.615 1.00 28.97 N
ATOM 18 C4 U A 33 5.235 2.162 17.759 1.00 28.13 C
ATOM 19 O4 U A 33 5.363 3.383 17.818 1.00 27.23 O
ATOM 20 C5 U A 33 5.585 1.234 18.807 1.00 29.02 C
ATOM 21 C6 U A 33 5.393 -0.081 18.612 1.00 29.67 C
ATOM 22 P C A 34 6.095 -6.145 16.405 1.00 40.31 P
ATOM 23 OP1 C A 34 5.823 -7.306 17.288 1.00 41.68 O
ATOM 24 OP2 C A 34 7.425 -5.486 16.399 1.00 41.18 O
ATOM 25 O5' C A 34 5.782 -6.524 14.893 1.00 40.31 O
TER
ATOM 1 O3' U B 59 5.312 0.087 6.736 1.00 30.44 O
ATOM 2 P A B 60 3.894 0.813 6.889 1.00 30.79 P
ATOM 3 OP1 A B 60 2.946 -0.024 6.117 1.00 31.52 O
ATOM 4 OP2 A B 60 4.015 2.258 6.609 1.00 29.22 O
ATOM 5 O5' A B 60 3.603 0.674 8.451 1.00 31.10 O
ATOM 6 C5' A B 60 3.341 -0.574 9.058 1.00 31.53 C
ATOM 7 C4' A B 60 3.175 -0.377 10.554 1.00 32.13 C
ATOM 8 O4' A B 60 4.421 0.104 11.119 1.00 31.10 O
ATOM 9 C3' A B 60 2.170 0.685 10.981 1.00 32.86 C
ATOM 10 O3' A B 60 0.842 0.203 10.888 1.00 35.23 O
ATOM 11 C2' A B 60 2.619 0.968 12.410 1.00 31.90 C
ATOM 12 O2' A B 60 2.279 -0.081 13.296 1.00 32.03 O
ATOM 13 C1' A B 60 4.135 0.992 12.191 1.00 30.43 C
ATOM 14 N9 A B 60 4.695 2.306 11.888 1.00 28.26 N
ATOM 15 C8 A B 60 5.033 2.816 10.657 1.00 28.42 C
ATOM 16 N7 A B 60 5.530 4.031 10.712 1.00 28.12 N
ATOM 17 C5 A B 60 5.528 4.333 12.069 1.00 27.10 C
ATOM 18 C6 A B 60 5.937 5.473 12.799 1.00 27.69 C
ATOM 19 N6 A B 60 6.450 6.566 12.220 1.00 27.80 N
ATOM 20 N1 A B 60 5.796 5.451 14.149 1.00 25.89 N
ATOM 21 C2 A B 60 5.286 4.352 14.725 1.00 26.79 C
ATOM 22 N3 A B 60 4.874 3.221 14.149 1.00 26.64 N
ATOM 23 C4 A B 60 5.023 3.275 12.808 1.00 28.26 C
ATOM 24 P U B 61 -0.338 1.196 10.471 1.00 36.55 P
ATOM 25 OP1 U B 61 -1.523 0.328 10.245 1.00 38.56 O
ATOM 26 OP2 U B 61 0.107 2.146 9.423 1.00 36.74 O
ATOM 27 O5' U B 61 -0.539 2.072 11.776 1.00 37.47 O
TER
Atoms:
C4: (5.235,2.162,17.759)
N3: (4.719,1.573,16.615)
OP1: (4.458,-5.749,22.183)
OP2: (6.035,-3.759,22.561)
C2: (4.509,0.234,16.394)
C1': (4.666,-2.071,17.264)
C3': (5.131,-4.290,17.900)
O5': (4.529,-3.791,20.605)
O4': (3.590,-2.491,18.079)
C5': (3.434,-4.220,19.794)
P: (4.724,-4.293,22.110)
C4': (3.723,-3.909,18.337)
C2': (5.841,-2.948,17.690)
O2': (6.841,-2.985,16.685)
N1: (4.865,-0.593,17.438)
O4: (5.363,3.383,17.818)
O2: (4.049,-0.190,15.352)
C6: (5.393,-0.081,18.612)
C5: (5.585,1.234,18.807)
O3': (5.007,-5.035,16.716)
N3: (4.719,1.573,16.615)
OP1: (4.458,-5.749,22.183)
OP2: (6.035,-3.759,22.561)
C2: (4.509,0.234,16.394)
C1': (4.666,-2.071,17.264)
C3': (5.131,-4.290,17.900)
O5': (4.529,-3.791,20.605)
O4': (3.590,-2.491,18.079)
C5': (3.434,-4.220,19.794)
P: (4.724,-4.293,22.110)
C4': (3.723,-3.909,18.337)
C2': (5.841,-2.948,17.690)
O2': (6.841,-2.985,16.685)
N1: (4.865,-0.593,17.438)
O4: (5.363,3.383,17.818)
O2: (4.049,-0.190,15.352)
C6: (5.393,-0.081,18.612)
C5: (5.585,1.234,18.807)
O3': (5.007,-5.035,16.716)
OP1: (2.946,-0.024,6.117)
OP2: (4.015,2.258,6.609)
C3': (2.170,0.685,10.981)
C1': (4.135,0.992,12.191)
C5': (3.341,-0.574,9.058)
O4': (4.421,0.104,11.119)
C8: (5.033,2.816,10.657)
O2': (2.279,-0.081,13.296)
C6: (5.937,5.473,12.799)
C5: (5.528,4.333,12.069)
C4: (5.023,3.275,12.808)
P: (3.894,0.813,6.889)
C4': (3.175,-0.377,10.554)
C2': (2.619,0.968,12.410)
C2: (5.286,4.352,14.725)
N1: (5.796,5.451,14.149)
N3: (4.874,3.221,14.149)
N6: (6.450,6.566,12.220)
N7: (5.530,4.031,10.712)
N9: (4.695,2.306,11.888)
O5': (3.603,0.674,8.451)
O3': (0.842,0.203,10.888)
OP2: (4.015,2.258,6.609)
C3': (2.170,0.685,10.981)
C1': (4.135,0.992,12.191)
C5': (3.341,-0.574,9.058)
O4': (4.421,0.104,11.119)
C8: (5.033,2.816,10.657)
O2': (2.279,-0.081,13.296)
C6: (5.937,5.473,12.799)
C5: (5.528,4.333,12.069)
C4: (5.023,3.275,12.808)
P: (3.894,0.813,6.889)
C4': (3.175,-0.377,10.554)
C2': (2.619,0.968,12.410)
C2: (5.286,4.352,14.725)
N1: (5.796,5.451,14.149)
N3: (4.874,3.221,14.149)
N6: (6.450,6.566,12.220)
N7: (5.530,4.031,10.712)
N9: (4.695,2.306,11.888)
O5': (3.603,0.674,8.451)
O3': (0.842,0.203,10.888)
Image (generated by PyMOL):