Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GER:A34:A61
Extra
PDB:
ATOM 1 O3' U A 33 3.091 15.875 -1.813 1.00 35.28 O
ATOM 2 P U A 34 4.379 16.620 -1.198 1.00 35.33 P
ATOM 3 OP1 U A 34 4.099 18.076 -1.256 1.00 34.88 O
ATOM 4 OP2 U A 34 5.592 16.079 -1.863 1.00 35.03 O
ATOM 5 O5' U A 34 4.419 16.180 0.336 1.00 33.92 O
ATOM 6 C5' U A 34 3.231 16.147 1.125 1.00 33.76 C
ATOM 7 C4' U A 34 3.538 16.447 2.578 1.00 32.15 C
ATOM 8 O4' U A 34 3.423 15.216 3.344 1.00 31.97 O
ATOM 9 C3' U A 34 4.952 16.953 2.856 1.00 32.73 C
ATOM 10 O3' U A 34 4.963 17.727 4.053 1.00 33.64 O
ATOM 11 C2' U A 34 5.738 15.659 3.048 1.00 31.84 C
ATOM 12 O2' U A 34 6.877 15.798 3.875 1.00 31.75 O
ATOM 13 C1' U A 34 4.707 14.794 3.765 1.00 30.92 C
ATOM 14 N1 U A 34 4.844 13.344 3.562 1.00 29.14 N
ATOM 15 C2 U A 34 4.533 12.530 4.632 1.00 28.30 C
ATOM 16 O2 U A 34 4.133 12.966 5.697 1.00 28.80 O
ATOM 17 N3 U A 34 4.706 11.189 4.410 1.00 27.58 N
ATOM 18 C4 U A 34 5.143 10.589 3.249 1.00 27.44 C
ATOM 19 O4 U A 34 5.246 9.362 3.206 1.00 27.28 O
ATOM 20 C5 U A 34 5.435 11.498 2.181 1.00 27.45 C
ATOM 21 C6 U A 34 5.276 12.813 2.369 1.00 28.06 C
ATOM 22 P C A 35 6.113 18.825 4.286 1.00 35.01 P
ATOM 23 OP1 C A 35 5.848 19.990 3.404 1.00 35.44 O
ATOM 24 OP2 C A 35 7.425 18.130 4.208 1.00 35.05 O
ATOM 25 O5' C A 35 5.896 19.289 5.792 1.00 34.48 O
TER
ATOM 1 O3' U B 60 5.294 12.980 14.329 1.00 29.47 O
ATOM 2 P A B 61 3.878 12.221 14.259 1.00 30.19 P
ATOM 3 OP1 A B 61 2.885 13.072 14.963 1.00 29.89 O
ATOM 4 OP2 A B 61 4.066 10.812 14.682 1.00 29.67 O
ATOM 5 O5' A B 61 3.525 12.210 12.707 1.00 30.07 O
ATOM 6 C5' A B 61 3.365 13.429 11.994 1.00 29.57 C
ATOM 7 C4' A B 61 3.046 13.154 10.543 1.00 29.66 C
ATOM 8 O4' A B 61 4.259 12.741 9.856 1.00 28.92 O
ATOM 9 C3' A B 61 2.074 12.014 10.286 1.00 30.14 C
ATOM 10 O3' A B 61 0.724 12.434 10.426 1.00 32.43 O
ATOM 11 C2' A B 61 2.420 11.626 8.854 1.00 29.28 C
ATOM 12 O2' A B 61 1.888 12.534 7.912 1.00 29.37 O
ATOM 13 C1' A B 61 3.941 11.770 8.868 1.00 28.28 C
ATOM 14 N9 A B 61 4.614 10.517 9.208 1.00 27.16 N
ATOM 15 C8 A B 61 4.983 10.060 10.449 1.00 26.66 C
ATOM 16 N7 A B 61 5.556 8.880 10.429 1.00 26.51 N
ATOM 17 C5 A B 61 5.571 8.539 9.083 1.00 26.35 C
ATOM 18 C6 A B 61 6.049 7.407 8.396 1.00 26.04 C
ATOM 19 N6 A B 61 6.633 6.362 8.996 1.00 25.94 N
ATOM 20 N1 A B 61 5.907 7.383 7.053 1.00 26.09 N
ATOM 21 C2 A B 61 5.330 8.430 6.450 1.00 26.09 C
ATOM 22 N3 A B 61 4.846 9.548 6.983 1.00 26.38 N
ATOM 23 C4 A B 61 4.997 9.540 8.319 1.00 26.82 C
ATOM 24 P U B 62 -0.378 11.393 10.960 1.00 33.49 P
ATOM 25 OP1 U B 62 -1.630 12.148 11.218 1.00 34.35 O
ATOM 26 OP2 U B 62 0.222 10.581 12.048 1.00 33.26 O
ATOM 27 O5' U B 62 -0.620 10.429 9.718 1.00 34.39 O
TER
ATOM 2 P U A 34 4.379 16.620 -1.198 1.00 35.33 P
ATOM 3 OP1 U A 34 4.099 18.076 -1.256 1.00 34.88 O
ATOM 4 OP2 U A 34 5.592 16.079 -1.863 1.00 35.03 O
ATOM 5 O5' U A 34 4.419 16.180 0.336 1.00 33.92 O
ATOM 6 C5' U A 34 3.231 16.147 1.125 1.00 33.76 C
ATOM 7 C4' U A 34 3.538 16.447 2.578 1.00 32.15 C
ATOM 8 O4' U A 34 3.423 15.216 3.344 1.00 31.97 O
ATOM 9 C3' U A 34 4.952 16.953 2.856 1.00 32.73 C
ATOM 10 O3' U A 34 4.963 17.727 4.053 1.00 33.64 O
ATOM 11 C2' U A 34 5.738 15.659 3.048 1.00 31.84 C
ATOM 12 O2' U A 34 6.877 15.798 3.875 1.00 31.75 O
ATOM 13 C1' U A 34 4.707 14.794 3.765 1.00 30.92 C
ATOM 14 N1 U A 34 4.844 13.344 3.562 1.00 29.14 N
ATOM 15 C2 U A 34 4.533 12.530 4.632 1.00 28.30 C
ATOM 16 O2 U A 34 4.133 12.966 5.697 1.00 28.80 O
ATOM 17 N3 U A 34 4.706 11.189 4.410 1.00 27.58 N
ATOM 18 C4 U A 34 5.143 10.589 3.249 1.00 27.44 C
ATOM 19 O4 U A 34 5.246 9.362 3.206 1.00 27.28 O
ATOM 20 C5 U A 34 5.435 11.498 2.181 1.00 27.45 C
ATOM 21 C6 U A 34 5.276 12.813 2.369 1.00 28.06 C
ATOM 22 P C A 35 6.113 18.825 4.286 1.00 35.01 P
ATOM 23 OP1 C A 35 5.848 19.990 3.404 1.00 35.44 O
ATOM 24 OP2 C A 35 7.425 18.130 4.208 1.00 35.05 O
ATOM 25 O5' C A 35 5.896 19.289 5.792 1.00 34.48 O
TER
ATOM 1 O3' U B 60 5.294 12.980 14.329 1.00 29.47 O
ATOM 2 P A B 61 3.878 12.221 14.259 1.00 30.19 P
ATOM 3 OP1 A B 61 2.885 13.072 14.963 1.00 29.89 O
ATOM 4 OP2 A B 61 4.066 10.812 14.682 1.00 29.67 O
ATOM 5 O5' A B 61 3.525 12.210 12.707 1.00 30.07 O
ATOM 6 C5' A B 61 3.365 13.429 11.994 1.00 29.57 C
ATOM 7 C4' A B 61 3.046 13.154 10.543 1.00 29.66 C
ATOM 8 O4' A B 61 4.259 12.741 9.856 1.00 28.92 O
ATOM 9 C3' A B 61 2.074 12.014 10.286 1.00 30.14 C
ATOM 10 O3' A B 61 0.724 12.434 10.426 1.00 32.43 O
ATOM 11 C2' A B 61 2.420 11.626 8.854 1.00 29.28 C
ATOM 12 O2' A B 61 1.888 12.534 7.912 1.00 29.37 O
ATOM 13 C1' A B 61 3.941 11.770 8.868 1.00 28.28 C
ATOM 14 N9 A B 61 4.614 10.517 9.208 1.00 27.16 N
ATOM 15 C8 A B 61 4.983 10.060 10.449 1.00 26.66 C
ATOM 16 N7 A B 61 5.556 8.880 10.429 1.00 26.51 N
ATOM 17 C5 A B 61 5.571 8.539 9.083 1.00 26.35 C
ATOM 18 C6 A B 61 6.049 7.407 8.396 1.00 26.04 C
ATOM 19 N6 A B 61 6.633 6.362 8.996 1.00 25.94 N
ATOM 20 N1 A B 61 5.907 7.383 7.053 1.00 26.09 N
ATOM 21 C2 A B 61 5.330 8.430 6.450 1.00 26.09 C
ATOM 22 N3 A B 61 4.846 9.548 6.983 1.00 26.38 N
ATOM 23 C4 A B 61 4.997 9.540 8.319 1.00 26.82 C
ATOM 24 P U B 62 -0.378 11.393 10.960 1.00 33.49 P
ATOM 25 OP1 U B 62 -1.630 12.148 11.218 1.00 34.35 O
ATOM 26 OP2 U B 62 0.222 10.581 12.048 1.00 33.26 O
ATOM 27 O5' U B 62 -0.620 10.429 9.718 1.00 34.39 O
TER
Atoms:
C4: (5.143,10.589,3.249)
N3: (4.706,11.189,4.410)
OP1: (4.099,18.076,-1.256)
OP2: (5.592,16.079,-1.863)
C2: (4.533,12.530,4.632)
C1': (4.707,14.794,3.765)
C3': (4.952,16.953,2.856)
O5': (4.419,16.180,0.336)
O4': (3.423,15.216,3.344)
C5': (3.231,16.147,1.125)
P: (4.379,16.620,-1.198)
C4': (3.538,16.447,2.578)
C2': (5.738,15.659,3.048)
O2': (6.877,15.798,3.875)
N1: (4.844,13.344,3.562)
O4: (5.246,9.362,3.206)
O2: (4.133,12.966,5.697)
C6: (5.276,12.813,2.369)
C5: (5.435,11.498,2.181)
O3': (4.963,17.727,4.053)
N3: (4.706,11.189,4.410)
OP1: (4.099,18.076,-1.256)
OP2: (5.592,16.079,-1.863)
C2: (4.533,12.530,4.632)
C1': (4.707,14.794,3.765)
C3': (4.952,16.953,2.856)
O5': (4.419,16.180,0.336)
O4': (3.423,15.216,3.344)
C5': (3.231,16.147,1.125)
P: (4.379,16.620,-1.198)
C4': (3.538,16.447,2.578)
C2': (5.738,15.659,3.048)
O2': (6.877,15.798,3.875)
N1: (4.844,13.344,3.562)
O4: (5.246,9.362,3.206)
O2: (4.133,12.966,5.697)
C6: (5.276,12.813,2.369)
C5: (5.435,11.498,2.181)
O3': (4.963,17.727,4.053)
OP1: (2.885,13.072,14.963)
OP2: (4.066,10.812,14.682)
C3': (2.074,12.014,10.286)
C1': (3.941,11.770,8.868)
C5': (3.365,13.429,11.994)
O4': (4.259,12.741,9.856)
C8: (4.983,10.060,10.449)
O2': (1.888,12.534,7.912)
C6: (6.049,7.407,8.396)
C5: (5.571,8.539,9.083)
C4: (4.997,9.540,8.319)
P: (3.878,12.221,14.259)
C4': (3.046,13.154,10.543)
C2': (2.420,11.626,8.854)
C2: (5.330,8.430,6.450)
N1: (5.907,7.383,7.053)
N3: (4.846,9.548,6.983)
N6: (6.633,6.362,8.996)
N7: (5.556,8.880,10.429)
N9: (4.614,10.517,9.208)
O5': (3.525,12.210,12.707)
O3': (0.724,12.434,10.426)
OP2: (4.066,10.812,14.682)
C3': (2.074,12.014,10.286)
C1': (3.941,11.770,8.868)
C5': (3.365,13.429,11.994)
O4': (4.259,12.741,9.856)
C8: (4.983,10.060,10.449)
O2': (1.888,12.534,7.912)
C6: (6.049,7.407,8.396)
C5: (5.571,8.539,9.083)
C4: (4.997,9.540,8.319)
P: (3.878,12.221,14.259)
C4': (3.046,13.154,10.543)
C2': (2.420,11.626,8.854)
C2: (5.330,8.430,6.450)
N1: (5.907,7.383,7.053)
N3: (4.846,9.548,6.983)
N6: (6.633,6.362,8.996)
N7: (5.556,8.880,10.429)
N9: (4.614,10.517,9.208)
O5': (3.525,12.210,12.707)
O3': (0.724,12.434,10.426)
Image (generated by PyMOL):