Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A338:A321
Extra
PDB:
ATOM 1 O3' G A 337 -9.675 185.995 204.547 1.00 18.76 O
ATOM 2 P U A 338 -10.143 187.484 204.172 1.00 25.15 P
ATOM 3 OP1 U A 338 -10.251 187.560 202.697 1.00 25.15 O
ATOM 4 OP2 U A 338 -9.225 188.422 204.863 1.00 25.15 O
ATOM 5 O5' U A 338 -11.574 187.553 204.814 1.00 25.15 O
ATOM 6 C5' U A 338 -12.600 186.720 204.347 1.00 25.15 C
ATOM 7 C4' U A 338 -13.905 187.148 204.913 1.00 25.15 C
ATOM 8 O4' U A 338 -13.994 186.703 206.291 1.00 25.15 O
ATOM 9 C3' U A 338 -14.114 188.653 204.982 1.00 25.15 C
ATOM 10 O3' U A 338 -14.581 189.199 203.764 1.00 25.15 O
ATOM 11 C2' U A 338 -15.100 188.782 206.113 1.00 25.15 C
ATOM 12 O2' U A 338 -16.398 188.404 205.665 1.00 25.15 O
ATOM 13 C1' U A 338 -14.575 187.711 207.074 1.00 25.15 C
ATOM 14 N1 U A 338 -13.527 188.226 207.985 1.00 25.01 N
ATOM 15 C2 U A 338 -13.864 188.947 209.126 1.00 25.01 C
ATOM 16 O2 U A 338 -15.013 189.239 209.455 1.00 25.01 O
ATOM 17 N3 U A 338 -12.783 189.337 209.888 1.00 25.01 N
ATOM 18 C4 U A 338 -11.451 189.090 209.668 1.00 25.01 C
ATOM 19 O4 U A 338 -10.629 189.520 210.475 1.00 25.01 O
ATOM 20 C5 U A 338 -11.186 188.341 208.484 1.00 25.01 C
ATOM 21 C6 U A 338 -12.208 187.937 207.713 1.00 25.01 C
ATOM 22 P A A 339 -14.129 190.669 203.308 1.00 34.35 P
ATOM 23 OP1 A A 339 -14.791 190.943 202.018 1.00 34.35 O
ATOM 24 OP2 A A 339 -12.644 190.718 203.376 1.00 34.35 O
ATOM 25 O5' A A 339 -14.757 191.593 204.441 1.00 34.35 O
TER
ATOM 1 O3' U B 320 -18.947 195.664 209.536 1.00 41.27 O
ATOM 2 P A B 321 -20.017 194.509 209.847 1.00 30.74 P
ATOM 3 OP1 A B 321 -20.851 194.350 208.631 1.00 30.74 O
ATOM 4 OP2 A B 321 -20.680 194.835 211.132 1.00 30.74 O
ATOM 5 O5' A B 321 -19.087 193.250 210.020 1.00 30.74 O
ATOM 6 C5' A B 321 -18.378 192.754 208.906 1.00 30.74 C
ATOM 7 C4' A B 321 -17.497 191.612 209.288 1.00 30.74 C
ATOM 8 O4' A B 321 -16.268 192.139 209.860 1.00 30.74 O
ATOM 9 C3' A B 321 -18.084 190.686 210.349 1.00 30.74 C
ATOM 10 O3' A B 321 -17.517 189.369 210.200 1.00 30.74 O
ATOM 11 C2' A B 321 -17.556 191.331 211.619 1.00 30.74 C
ATOM 12 O2' A B 321 -17.585 190.503 212.760 1.00 30.74 O
ATOM 13 C1' A B 321 -16.133 191.649 211.170 1.00 30.74 C
ATOM 14 N9 A B 321 -15.443 192.650 211.958 1.00 30.98 N
ATOM 15 C8 A B 321 -15.889 193.815 212.519 1.00 30.98 C
ATOM 16 N7 A B 321 -14.932 194.458 213.156 1.00 30.98 N
ATOM 17 C5 A B 321 -13.798 193.650 212.979 1.00 30.98 C
ATOM 18 C6 A B 321 -12.454 193.750 213.395 1.00 30.98 C
ATOM 19 N6 A B 321 -11.979 194.766 214.126 1.00 30.98 N
ATOM 20 N1 A B 321 -11.605 192.760 213.036 1.00 30.98 N
ATOM 21 C2 A B 321 -12.077 191.744 212.318 1.00 30.98 C
ATOM 22 N3 A B 321 -13.312 191.548 211.868 1.00 30.98 N
ATOM 23 C4 A B 321 -14.119 192.539 212.238 1.00 30.98 C
ATOM 24 P C B 322 -18.242 188.267 209.273 1.00 18.03 P
ATOM 25 OP1 C B 322 -17.641 186.937 209.612 1.00 18.03 O
ATOM 26 OP2 C B 322 -18.186 188.752 207.871 1.00 18.03 O
ATOM 27 O5' C B 322 -19.729 188.319 209.800 1.00 18.03 O
TER
ATOM 2 P U A 338 -10.143 187.484 204.172 1.00 25.15 P
ATOM 3 OP1 U A 338 -10.251 187.560 202.697 1.00 25.15 O
ATOM 4 OP2 U A 338 -9.225 188.422 204.863 1.00 25.15 O
ATOM 5 O5' U A 338 -11.574 187.553 204.814 1.00 25.15 O
ATOM 6 C5' U A 338 -12.600 186.720 204.347 1.00 25.15 C
ATOM 7 C4' U A 338 -13.905 187.148 204.913 1.00 25.15 C
ATOM 8 O4' U A 338 -13.994 186.703 206.291 1.00 25.15 O
ATOM 9 C3' U A 338 -14.114 188.653 204.982 1.00 25.15 C
ATOM 10 O3' U A 338 -14.581 189.199 203.764 1.00 25.15 O
ATOM 11 C2' U A 338 -15.100 188.782 206.113 1.00 25.15 C
ATOM 12 O2' U A 338 -16.398 188.404 205.665 1.00 25.15 O
ATOM 13 C1' U A 338 -14.575 187.711 207.074 1.00 25.15 C
ATOM 14 N1 U A 338 -13.527 188.226 207.985 1.00 25.01 N
ATOM 15 C2 U A 338 -13.864 188.947 209.126 1.00 25.01 C
ATOM 16 O2 U A 338 -15.013 189.239 209.455 1.00 25.01 O
ATOM 17 N3 U A 338 -12.783 189.337 209.888 1.00 25.01 N
ATOM 18 C4 U A 338 -11.451 189.090 209.668 1.00 25.01 C
ATOM 19 O4 U A 338 -10.629 189.520 210.475 1.00 25.01 O
ATOM 20 C5 U A 338 -11.186 188.341 208.484 1.00 25.01 C
ATOM 21 C6 U A 338 -12.208 187.937 207.713 1.00 25.01 C
ATOM 22 P A A 339 -14.129 190.669 203.308 1.00 34.35 P
ATOM 23 OP1 A A 339 -14.791 190.943 202.018 1.00 34.35 O
ATOM 24 OP2 A A 339 -12.644 190.718 203.376 1.00 34.35 O
ATOM 25 O5' A A 339 -14.757 191.593 204.441 1.00 34.35 O
TER
ATOM 1 O3' U B 320 -18.947 195.664 209.536 1.00 41.27 O
ATOM 2 P A B 321 -20.017 194.509 209.847 1.00 30.74 P
ATOM 3 OP1 A B 321 -20.851 194.350 208.631 1.00 30.74 O
ATOM 4 OP2 A B 321 -20.680 194.835 211.132 1.00 30.74 O
ATOM 5 O5' A B 321 -19.087 193.250 210.020 1.00 30.74 O
ATOM 6 C5' A B 321 -18.378 192.754 208.906 1.00 30.74 C
ATOM 7 C4' A B 321 -17.497 191.612 209.288 1.00 30.74 C
ATOM 8 O4' A B 321 -16.268 192.139 209.860 1.00 30.74 O
ATOM 9 C3' A B 321 -18.084 190.686 210.349 1.00 30.74 C
ATOM 10 O3' A B 321 -17.517 189.369 210.200 1.00 30.74 O
ATOM 11 C2' A B 321 -17.556 191.331 211.619 1.00 30.74 C
ATOM 12 O2' A B 321 -17.585 190.503 212.760 1.00 30.74 O
ATOM 13 C1' A B 321 -16.133 191.649 211.170 1.00 30.74 C
ATOM 14 N9 A B 321 -15.443 192.650 211.958 1.00 30.98 N
ATOM 15 C8 A B 321 -15.889 193.815 212.519 1.00 30.98 C
ATOM 16 N7 A B 321 -14.932 194.458 213.156 1.00 30.98 N
ATOM 17 C5 A B 321 -13.798 193.650 212.979 1.00 30.98 C
ATOM 18 C6 A B 321 -12.454 193.750 213.395 1.00 30.98 C
ATOM 19 N6 A B 321 -11.979 194.766 214.126 1.00 30.98 N
ATOM 20 N1 A B 321 -11.605 192.760 213.036 1.00 30.98 N
ATOM 21 C2 A B 321 -12.077 191.744 212.318 1.00 30.98 C
ATOM 22 N3 A B 321 -13.312 191.548 211.868 1.00 30.98 N
ATOM 23 C4 A B 321 -14.119 192.539 212.238 1.00 30.98 C
ATOM 24 P C B 322 -18.242 188.267 209.273 1.00 18.03 P
ATOM 25 OP1 C B 322 -17.641 186.937 209.612 1.00 18.03 O
ATOM 26 OP2 C B 322 -18.186 188.752 207.871 1.00 18.03 O
ATOM 27 O5' C B 322 -19.729 188.319 209.800 1.00 18.03 O
TER
Atoms:
C4: (-11.451,189.090,209.668)
N3: (-12.783,189.337,209.888)
OP1: (-10.251,187.560,202.697)
OP2: (-9.225,188.422,204.863)
C2: (-13.864,188.947,209.126)
C1': (-14.575,187.711,207.074)
C3': (-14.114,188.653,204.982)
O5': (-11.574,187.553,204.814)
O4': (-13.994,186.703,206.291)
C5': (-12.600,186.720,204.347)
P: (-10.143,187.484,204.172)
C4': (-13.905,187.148,204.913)
C2': (-15.100,188.782,206.113)
O2': (-16.398,188.404,205.665)
N1: (-13.527,188.226,207.985)
O4: (-10.629,189.520,210.475)
O2: (-15.013,189.239,209.455)
C6: (-12.208,187.937,207.713)
C5: (-11.186,188.341,208.484)
O3': (-14.581,189.199,203.764)
N3: (-12.783,189.337,209.888)
OP1: (-10.251,187.560,202.697)
OP2: (-9.225,188.422,204.863)
C2: (-13.864,188.947,209.126)
C1': (-14.575,187.711,207.074)
C3': (-14.114,188.653,204.982)
O5': (-11.574,187.553,204.814)
O4': (-13.994,186.703,206.291)
C5': (-12.600,186.720,204.347)
P: (-10.143,187.484,204.172)
C4': (-13.905,187.148,204.913)
C2': (-15.100,188.782,206.113)
O2': (-16.398,188.404,205.665)
N1: (-13.527,188.226,207.985)
O4: (-10.629,189.520,210.475)
O2: (-15.013,189.239,209.455)
C6: (-12.208,187.937,207.713)
C5: (-11.186,188.341,208.484)
O3': (-14.581,189.199,203.764)
OP1: (-20.851,194.350,208.631)
OP2: (-20.680,194.835,211.132)
C3': (-18.084,190.686,210.349)
C1': (-16.133,191.649,211.170)
C5': (-18.378,192.754,208.906)
O4': (-16.268,192.139,209.860)
C8: (-15.889,193.815,212.519)
O2': (-17.585,190.503,212.760)
C6: (-12.454,193.750,213.395)
C5: (-13.798,193.650,212.979)
C4: (-14.119,192.539,212.238)
P: (-20.017,194.509,209.847)
C4': (-17.497,191.612,209.288)
C2': (-17.556,191.331,211.619)
C2: (-12.077,191.744,212.318)
N1: (-11.605,192.760,213.036)
N3: (-13.312,191.548,211.868)
N6: (-11.979,194.766,214.126)
N7: (-14.932,194.458,213.156)
N9: (-15.443,192.650,211.958)
O5': (-19.087,193.250,210.020)
O3': (-17.517,189.369,210.200)
OP2: (-20.680,194.835,211.132)
C3': (-18.084,190.686,210.349)
C1': (-16.133,191.649,211.170)
C5': (-18.378,192.754,208.906)
O4': (-16.268,192.139,209.860)
C8: (-15.889,193.815,212.519)
O2': (-17.585,190.503,212.760)
C6: (-12.454,193.750,213.395)
C5: (-13.798,193.650,212.979)
C4: (-14.119,192.539,212.238)
P: (-20.017,194.509,209.847)
C4': (-17.497,191.612,209.288)
C2': (-17.556,191.331,211.619)
C2: (-12.077,191.744,212.318)
N1: (-11.605,192.760,213.036)
N3: (-13.312,191.548,211.868)
N6: (-11.979,194.766,214.126)
N7: (-14.932,194.458,213.156)
N9: (-15.443,192.650,211.958)
O5': (-19.087,193.250,210.020)
O3': (-17.517,189.369,210.200)
Image (generated by PyMOL):