Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:B34:B61
Extra
PDB:
ATOM 1 O3' U A 33 38.574 -23.348 -37.980 1.00 52.06 O
ATOM 2 P U A 34 38.764 -22.421 -36.678 1.00 49.76 P
ATOM 3 OP1 U A 34 39.639 -23.163 -35.740 1.00 57.37 O
ATOM 4 OP2 U A 34 37.412 -22.026 -36.222 1.00 48.49 O
ATOM 5 O5' U A 34 39.540 -21.154 -37.249 1.00 53.84 O
ATOM 6 C5' U A 34 40.956 -21.179 -37.402 1.00 52.91 C
ATOM 7 C4' U A 34 41.571 -19.811 -37.216 1.00 52.24 C
ATOM 8 O4' U A 34 41.345 -19.015 -38.411 1.00 53.23 O
ATOM 9 C3' U A 34 41.023 -18.992 -36.044 1.00 49.92 C
ATOM 10 O3' U A 34 42.084 -18.228 -35.464 1.00 50.84 O
ATOM 11 C2' U A 34 40.034 -18.050 -36.726 1.00 48.70 C
ATOM 12 O2' U A 34 39.784 -16.850 -36.025 1.00 47.78 O
ATOM 13 C1' U A 34 40.733 -17.792 -38.057 1.00 47.31 C
ATOM 14 N1 U A 34 39.824 -17.396 -39.150 1.00 47.74 N
ATOM 15 C2 U A 34 40.323 -16.506 -40.078 1.00 47.50 C
ATOM 16 O2 U A 34 41.459 -16.067 -40.016 1.00 45.35 O
ATOM 17 N3 U A 34 39.447 -16.158 -41.077 1.00 45.05 N
ATOM 18 C4 U A 34 38.148 -16.603 -41.229 1.00 45.63 C
ATOM 19 O4 U A 34 37.472 -16.205 -42.180 1.00 43.18 O
ATOM 20 C5 U A 34 37.710 -17.520 -40.221 1.00 45.08 C
ATOM 21 C6 U A 34 38.541 -17.877 -39.238 1.00 44.72 C
ATOM 22 P C A 35 42.093 -17.917 -33.886 1.00 49.19 P
ATOM 23 OP1 C A 35 42.397 -19.191 -33.190 1.00 51.24 O
ATOM 24 OP2 C A 35 40.823 -17.221 -33.572 1.00 56.99 O
ATOM 25 O5' C A 35 43.317 -16.907 -33.729 1.00 47.93 O
TER
ATOM 1 O3' U B 60 46.087 -8.255 -40.113 1.00 52.28 O
ATOM 2 P A B 61 46.344 -9.018 -41.505 1.00 50.07 P
ATOM 3 OP1 A B 61 47.794 -9.333 -41.571 1.00 59.94 O
ATOM 4 OP2 A B 61 45.747 -8.184 -42.576 1.00 46.30 O
ATOM 5 O5' A B 61 45.506 -10.361 -41.335 1.00 46.78 O
ATOM 6 C5' A B 61 45.997 -11.433 -40.542 1.00 46.80 C
ATOM 7 C4' A B 61 45.160 -12.677 -40.715 1.00 43.02 C
ATOM 8 O4' A B 61 43.796 -12.414 -40.291 1.00 39.29 O
ATOM 9 C3' A B 61 45.017 -13.185 -42.141 1.00 41.06 C
ATOM 10 O3' A B 61 46.117 -13.968 -42.561 1.00 38.86 O
ATOM 11 C2' A B 61 43.704 -13.952 -42.096 1.00 42.29 C
ATOM 12 O2' A B 61 43.891 -15.231 -41.511 1.00 39.02 O
ATOM 13 C1' A B 61 42.889 -13.095 -41.132 1.00 38.25 C
ATOM 14 N9 A B 61 42.073 -12.093 -41.839 1.00 35.74 N
ATOM 15 C8 A B 61 42.410 -10.787 -42.088 1.00 40.81 C
ATOM 16 N7 A B 61 41.485 -10.119 -42.730 1.00 39.77 N
ATOM 17 C5 A B 61 40.470 -11.048 -42.911 1.00 39.98 C
ATOM 18 C6 A B 61 39.209 -10.965 -43.525 1.00 37.24 C
ATOM 19 N6 A B 61 38.734 -9.856 -44.097 1.00 38.59 N
ATOM 20 N1 A B 61 38.441 -12.077 -43.535 1.00 34.95 N
ATOM 21 C2 A B 61 38.913 -13.193 -42.964 1.00 37.13 C
ATOM 22 N3 A B 61 40.078 -13.394 -42.355 1.00 37.98 N
ATOM 23 C4 A B 61 40.817 -12.270 -42.363 1.00 39.06 C
ATOM 24 P U B 62 46.465 -14.092 -44.123 1.00 44.53 P
ATOM 25 OP1 U B 62 47.687 -14.922 -44.234 1.00 47.73 O
ATOM 26 OP2 U B 62 46.484 -12.716 -44.676 1.00 36.42 O
ATOM 27 O5' U B 62 45.215 -14.892 -44.700 1.00 44.80 O
TER
ATOM 2 P U A 34 38.764 -22.421 -36.678 1.00 49.76 P
ATOM 3 OP1 U A 34 39.639 -23.163 -35.740 1.00 57.37 O
ATOM 4 OP2 U A 34 37.412 -22.026 -36.222 1.00 48.49 O
ATOM 5 O5' U A 34 39.540 -21.154 -37.249 1.00 53.84 O
ATOM 6 C5' U A 34 40.956 -21.179 -37.402 1.00 52.91 C
ATOM 7 C4' U A 34 41.571 -19.811 -37.216 1.00 52.24 C
ATOM 8 O4' U A 34 41.345 -19.015 -38.411 1.00 53.23 O
ATOM 9 C3' U A 34 41.023 -18.992 -36.044 1.00 49.92 C
ATOM 10 O3' U A 34 42.084 -18.228 -35.464 1.00 50.84 O
ATOM 11 C2' U A 34 40.034 -18.050 -36.726 1.00 48.70 C
ATOM 12 O2' U A 34 39.784 -16.850 -36.025 1.00 47.78 O
ATOM 13 C1' U A 34 40.733 -17.792 -38.057 1.00 47.31 C
ATOM 14 N1 U A 34 39.824 -17.396 -39.150 1.00 47.74 N
ATOM 15 C2 U A 34 40.323 -16.506 -40.078 1.00 47.50 C
ATOM 16 O2 U A 34 41.459 -16.067 -40.016 1.00 45.35 O
ATOM 17 N3 U A 34 39.447 -16.158 -41.077 1.00 45.05 N
ATOM 18 C4 U A 34 38.148 -16.603 -41.229 1.00 45.63 C
ATOM 19 O4 U A 34 37.472 -16.205 -42.180 1.00 43.18 O
ATOM 20 C5 U A 34 37.710 -17.520 -40.221 1.00 45.08 C
ATOM 21 C6 U A 34 38.541 -17.877 -39.238 1.00 44.72 C
ATOM 22 P C A 35 42.093 -17.917 -33.886 1.00 49.19 P
ATOM 23 OP1 C A 35 42.397 -19.191 -33.190 1.00 51.24 O
ATOM 24 OP2 C A 35 40.823 -17.221 -33.572 1.00 56.99 O
ATOM 25 O5' C A 35 43.317 -16.907 -33.729 1.00 47.93 O
TER
ATOM 1 O3' U B 60 46.087 -8.255 -40.113 1.00 52.28 O
ATOM 2 P A B 61 46.344 -9.018 -41.505 1.00 50.07 P
ATOM 3 OP1 A B 61 47.794 -9.333 -41.571 1.00 59.94 O
ATOM 4 OP2 A B 61 45.747 -8.184 -42.576 1.00 46.30 O
ATOM 5 O5' A B 61 45.506 -10.361 -41.335 1.00 46.78 O
ATOM 6 C5' A B 61 45.997 -11.433 -40.542 1.00 46.80 C
ATOM 7 C4' A B 61 45.160 -12.677 -40.715 1.00 43.02 C
ATOM 8 O4' A B 61 43.796 -12.414 -40.291 1.00 39.29 O
ATOM 9 C3' A B 61 45.017 -13.185 -42.141 1.00 41.06 C
ATOM 10 O3' A B 61 46.117 -13.968 -42.561 1.00 38.86 O
ATOM 11 C2' A B 61 43.704 -13.952 -42.096 1.00 42.29 C
ATOM 12 O2' A B 61 43.891 -15.231 -41.511 1.00 39.02 O
ATOM 13 C1' A B 61 42.889 -13.095 -41.132 1.00 38.25 C
ATOM 14 N9 A B 61 42.073 -12.093 -41.839 1.00 35.74 N
ATOM 15 C8 A B 61 42.410 -10.787 -42.088 1.00 40.81 C
ATOM 16 N7 A B 61 41.485 -10.119 -42.730 1.00 39.77 N
ATOM 17 C5 A B 61 40.470 -11.048 -42.911 1.00 39.98 C
ATOM 18 C6 A B 61 39.209 -10.965 -43.525 1.00 37.24 C
ATOM 19 N6 A B 61 38.734 -9.856 -44.097 1.00 38.59 N
ATOM 20 N1 A B 61 38.441 -12.077 -43.535 1.00 34.95 N
ATOM 21 C2 A B 61 38.913 -13.193 -42.964 1.00 37.13 C
ATOM 22 N3 A B 61 40.078 -13.394 -42.355 1.00 37.98 N
ATOM 23 C4 A B 61 40.817 -12.270 -42.363 1.00 39.06 C
ATOM 24 P U B 62 46.465 -14.092 -44.123 1.00 44.53 P
ATOM 25 OP1 U B 62 47.687 -14.922 -44.234 1.00 47.73 O
ATOM 26 OP2 U B 62 46.484 -12.716 -44.676 1.00 36.42 O
ATOM 27 O5' U B 62 45.215 -14.892 -44.700 1.00 44.80 O
TER
Atoms:
C4: (38.148,-16.603,-41.229)
N3: (39.447,-16.158,-41.077)
OP1: (39.639,-23.163,-35.740)
OP2: (37.412,-22.026,-36.222)
C2: (40.323,-16.506,-40.078)
C1': (40.733,-17.792,-38.057)
C3': (41.023,-18.992,-36.044)
O5': (39.540,-21.154,-37.249)
O4': (41.345,-19.015,-38.411)
C5': (40.956,-21.179,-37.402)
P: (38.764,-22.421,-36.678)
C4': (41.571,-19.811,-37.216)
C2': (40.034,-18.050,-36.726)
O2': (39.784,-16.850,-36.025)
N1: (39.824,-17.396,-39.150)
O4: (37.472,-16.205,-42.180)
O2: (41.459,-16.067,-40.016)
C6: (38.541,-17.877,-39.238)
C5: (37.710,-17.520,-40.221)
O3': (42.084,-18.228,-35.464)
N3: (39.447,-16.158,-41.077)
OP1: (39.639,-23.163,-35.740)
OP2: (37.412,-22.026,-36.222)
C2: (40.323,-16.506,-40.078)
C1': (40.733,-17.792,-38.057)
C3': (41.023,-18.992,-36.044)
O5': (39.540,-21.154,-37.249)
O4': (41.345,-19.015,-38.411)
C5': (40.956,-21.179,-37.402)
P: (38.764,-22.421,-36.678)
C4': (41.571,-19.811,-37.216)
C2': (40.034,-18.050,-36.726)
O2': (39.784,-16.850,-36.025)
N1: (39.824,-17.396,-39.150)
O4: (37.472,-16.205,-42.180)
O2: (41.459,-16.067,-40.016)
C6: (38.541,-17.877,-39.238)
C5: (37.710,-17.520,-40.221)
O3': (42.084,-18.228,-35.464)
OP1: (47.794,-9.333,-41.571)
OP2: (45.747,-8.184,-42.576)
C3': (45.017,-13.185,-42.141)
C1': (42.889,-13.095,-41.132)
C5': (45.997,-11.433,-40.542)
O4': (43.796,-12.414,-40.291)
C8: (42.410,-10.787,-42.088)
O2': (43.891,-15.231,-41.511)
C6: (39.209,-10.965,-43.525)
C5: (40.470,-11.048,-42.911)
C4: (40.817,-12.270,-42.363)
P: (46.344,-9.018,-41.505)
C4': (45.160,-12.677,-40.715)
C2': (43.704,-13.952,-42.096)
C2: (38.913,-13.193,-42.964)
N1: (38.441,-12.077,-43.535)
N3: (40.078,-13.394,-42.355)
N6: (38.734,-9.856,-44.097)
N7: (41.485,-10.119,-42.730)
N9: (42.073,-12.093,-41.839)
O5': (45.506,-10.361,-41.335)
O3': (46.117,-13.968,-42.561)
OP2: (45.747,-8.184,-42.576)
C3': (45.017,-13.185,-42.141)
C1': (42.889,-13.095,-41.132)
C5': (45.997,-11.433,-40.542)
O4': (43.796,-12.414,-40.291)
C8: (42.410,-10.787,-42.088)
O2': (43.891,-15.231,-41.511)
C6: (39.209,-10.965,-43.525)
C5: (40.470,-11.048,-42.911)
C4: (40.817,-12.270,-42.363)
P: (46.344,-9.018,-41.505)
C4': (45.160,-12.677,-40.715)
C2': (43.704,-13.952,-42.096)
C2: (38.913,-13.193,-42.964)
N1: (38.441,-12.077,-43.535)
N3: (40.078,-13.394,-42.355)
N6: (38.734,-9.856,-44.097)
N7: (41.485,-10.119,-42.730)
N9: (42.073,-12.093,-41.839)
O5': (45.506,-10.361,-41.335)
O3': (46.117,-13.968,-42.561)
Image (generated by PyMOL):