Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:D34:D61
Extra
PDB:
ATOM 1 O3' U A 33 41.205 -7.253 -78.947 1.00 65.86 O
ATOM 2 P U A 34 40.451 -6.561 -77.704 1.00 74.68 P
ATOM 3 OP1 U A 34 41.502 -6.041 -76.795 1.00 68.84 O
ATOM 4 OP2 U A 34 39.484 -7.551 -77.174 1.00 64.02 O
ATOM 5 O5' U A 34 39.674 -5.342 -78.380 1.00 65.53 O
ATOM 6 C5' U A 34 40.358 -4.132 -78.695 1.00 62.57 C
ATOM 7 C4' U A 34 39.437 -2.932 -78.692 1.00 56.79 C
ATOM 8 O4' U A 34 38.717 -2.870 -79.954 1.00 49.65 O
ATOM 9 C3' U A 34 38.377 -2.907 -77.589 1.00 58.81 C
ATOM 10 O3' U A 34 38.190 -1.562 -77.146 1.00 54.09 O
ATOM 11 C2' U A 34 37.122 -3.377 -78.319 1.00 51.76 C
ATOM 12 O2' U A 34 35.909 -2.948 -77.738 1.00 49.32 O
ATOM 13 C1' U A 34 37.331 -2.768 -79.701 1.00 50.19 C
ATOM 14 N1 U A 34 36.605 -3.459 -80.787 1.00 47.98 N
ATOM 15 C2 U A 34 36.028 -2.660 -81.753 1.00 50.45 C
ATOM 16 O2 U A 34 36.105 -1.445 -81.732 1.00 55.85 O
ATOM 17 N3 U A 34 35.363 -3.331 -82.747 1.00 49.66 N
ATOM 18 C4 U A 34 35.217 -4.695 -82.869 1.00 50.43 C
ATOM 19 O4 U A 34 34.586 -5.153 -83.823 1.00 51.28 O
ATOM 20 C5 U A 34 35.842 -5.454 -81.831 1.00 50.48 C
ATOM 21 C6 U A 34 36.499 -4.829 -80.848 1.00 52.67 C
ATOM 22 P C A 35 37.768 -1.257 -75.624 1.00 63.19 P
ATOM 23 OP1 C A 35 38.935 -1.589 -74.769 1.00 65.55 O
ATOM 24 OP2 C A 35 36.483 -1.956 -75.378 1.00 57.83 O
ATOM 25 O5' C A 35 37.532 0.319 -75.632 1.00 53.20 O
TER
ATOM 1 O3' U B 60 32.138 6.122 -82.426 1.00 62.23 O
ATOM 2 P A B 61 33.051 5.879 -83.729 1.00 62.35 P
ATOM 3 OP1 A B 61 34.024 6.992 -83.795 1.00 58.26 O
ATOM 4 OP2 A B 61 32.131 5.669 -84.874 1.00 44.92 O
ATOM 5 O5' A B 61 33.806 4.520 -83.386 1.00 57.34 O
ATOM 6 C5' A B 61 34.945 4.508 -82.536 1.00 55.32 C
ATOM 7 C4' A B 61 35.669 3.188 -82.611 1.00 54.29 C
ATOM 8 O4' A B 61 34.809 2.131 -82.104 1.00 54.89 O
ATOM 9 C3' A B 61 36.045 2.719 -84.010 1.00 57.93 C
ATOM 10 O3' A B 61 37.244 3.298 -84.491 1.00 59.62 O
ATOM 11 C2' A B 61 36.113 1.210 -83.848 1.00 57.74 C
ATOM 12 O2' A B 61 37.307 0.831 -83.178 1.00 52.63 O
ATOM 13 C1' A B 61 34.940 0.975 -82.905 1.00 54.12 C
ATOM 14 N9 A B 61 33.679 0.785 -83.644 1.00 48.96 N
ATOM 15 C8 A B 61 32.767 1.753 -83.984 1.00 45.54 C
ATOM 16 N7 A B 61 31.732 1.298 -84.643 1.00 44.68 N
ATOM 17 C5 A B 61 31.982 -0.063 -84.743 1.00 45.00 C
ATOM 18 C6 A B 61 31.258 -1.110 -85.333 1.00 43.50 C
ATOM 19 N6 A B 61 30.090 -0.938 -85.955 1.00 38.28 N
ATOM 20 N1 A B 61 31.780 -2.354 -85.261 1.00 44.75 N
ATOM 21 C2 A B 61 32.952 -2.521 -84.636 1.00 46.92 C
ATOM 22 N3 A B 61 33.725 -1.616 -84.043 1.00 48.26 N
ATOM 23 C4 A B 61 33.177 -0.394 -84.132 1.00 47.69 C
ATOM 24 P U B 62 37.402 3.633 -86.054 1.00 66.21 P
ATOM 25 OP1 U B 62 38.604 4.491 -86.199 1.00 71.65 O
ATOM 26 OP2 U B 62 36.094 4.150 -86.523 1.00 52.37 O
ATOM 27 O5' U B 62 37.674 2.203 -86.696 1.00 57.42 O
TER
ATOM 2 P U A 34 40.451 -6.561 -77.704 1.00 74.68 P
ATOM 3 OP1 U A 34 41.502 -6.041 -76.795 1.00 68.84 O
ATOM 4 OP2 U A 34 39.484 -7.551 -77.174 1.00 64.02 O
ATOM 5 O5' U A 34 39.674 -5.342 -78.380 1.00 65.53 O
ATOM 6 C5' U A 34 40.358 -4.132 -78.695 1.00 62.57 C
ATOM 7 C4' U A 34 39.437 -2.932 -78.692 1.00 56.79 C
ATOM 8 O4' U A 34 38.717 -2.870 -79.954 1.00 49.65 O
ATOM 9 C3' U A 34 38.377 -2.907 -77.589 1.00 58.81 C
ATOM 10 O3' U A 34 38.190 -1.562 -77.146 1.00 54.09 O
ATOM 11 C2' U A 34 37.122 -3.377 -78.319 1.00 51.76 C
ATOM 12 O2' U A 34 35.909 -2.948 -77.738 1.00 49.32 O
ATOM 13 C1' U A 34 37.331 -2.768 -79.701 1.00 50.19 C
ATOM 14 N1 U A 34 36.605 -3.459 -80.787 1.00 47.98 N
ATOM 15 C2 U A 34 36.028 -2.660 -81.753 1.00 50.45 C
ATOM 16 O2 U A 34 36.105 -1.445 -81.732 1.00 55.85 O
ATOM 17 N3 U A 34 35.363 -3.331 -82.747 1.00 49.66 N
ATOM 18 C4 U A 34 35.217 -4.695 -82.869 1.00 50.43 C
ATOM 19 O4 U A 34 34.586 -5.153 -83.823 1.00 51.28 O
ATOM 20 C5 U A 34 35.842 -5.454 -81.831 1.00 50.48 C
ATOM 21 C6 U A 34 36.499 -4.829 -80.848 1.00 52.67 C
ATOM 22 P C A 35 37.768 -1.257 -75.624 1.00 63.19 P
ATOM 23 OP1 C A 35 38.935 -1.589 -74.769 1.00 65.55 O
ATOM 24 OP2 C A 35 36.483 -1.956 -75.378 1.00 57.83 O
ATOM 25 O5' C A 35 37.532 0.319 -75.632 1.00 53.20 O
TER
ATOM 1 O3' U B 60 32.138 6.122 -82.426 1.00 62.23 O
ATOM 2 P A B 61 33.051 5.879 -83.729 1.00 62.35 P
ATOM 3 OP1 A B 61 34.024 6.992 -83.795 1.00 58.26 O
ATOM 4 OP2 A B 61 32.131 5.669 -84.874 1.00 44.92 O
ATOM 5 O5' A B 61 33.806 4.520 -83.386 1.00 57.34 O
ATOM 6 C5' A B 61 34.945 4.508 -82.536 1.00 55.32 C
ATOM 7 C4' A B 61 35.669 3.188 -82.611 1.00 54.29 C
ATOM 8 O4' A B 61 34.809 2.131 -82.104 1.00 54.89 O
ATOM 9 C3' A B 61 36.045 2.719 -84.010 1.00 57.93 C
ATOM 10 O3' A B 61 37.244 3.298 -84.491 1.00 59.62 O
ATOM 11 C2' A B 61 36.113 1.210 -83.848 1.00 57.74 C
ATOM 12 O2' A B 61 37.307 0.831 -83.178 1.00 52.63 O
ATOM 13 C1' A B 61 34.940 0.975 -82.905 1.00 54.12 C
ATOM 14 N9 A B 61 33.679 0.785 -83.644 1.00 48.96 N
ATOM 15 C8 A B 61 32.767 1.753 -83.984 1.00 45.54 C
ATOM 16 N7 A B 61 31.732 1.298 -84.643 1.00 44.68 N
ATOM 17 C5 A B 61 31.982 -0.063 -84.743 1.00 45.00 C
ATOM 18 C6 A B 61 31.258 -1.110 -85.333 1.00 43.50 C
ATOM 19 N6 A B 61 30.090 -0.938 -85.955 1.00 38.28 N
ATOM 20 N1 A B 61 31.780 -2.354 -85.261 1.00 44.75 N
ATOM 21 C2 A B 61 32.952 -2.521 -84.636 1.00 46.92 C
ATOM 22 N3 A B 61 33.725 -1.616 -84.043 1.00 48.26 N
ATOM 23 C4 A B 61 33.177 -0.394 -84.132 1.00 47.69 C
ATOM 24 P U B 62 37.402 3.633 -86.054 1.00 66.21 P
ATOM 25 OP1 U B 62 38.604 4.491 -86.199 1.00 71.65 O
ATOM 26 OP2 U B 62 36.094 4.150 -86.523 1.00 52.37 O
ATOM 27 O5' U B 62 37.674 2.203 -86.696 1.00 57.42 O
TER
Atoms:
C4: (35.217,-4.695,-82.869)
N3: (35.363,-3.331,-82.747)
OP1: (41.502,-6.041,-76.795)
OP2: (39.484,-7.551,-77.174)
C2: (36.028,-2.660,-81.753)
C1': (37.331,-2.768,-79.701)
C3': (38.377,-2.907,-77.589)
O5': (39.674,-5.342,-78.380)
O4': (38.717,-2.870,-79.954)
C5': (40.358,-4.132,-78.695)
P: (40.451,-6.561,-77.704)
C4': (39.437,-2.932,-78.692)
C2': (37.122,-3.377,-78.319)
O2': (35.909,-2.948,-77.738)
N1: (36.605,-3.459,-80.787)
O4: (34.586,-5.153,-83.823)
O2: (36.105,-1.445,-81.732)
C6: (36.499,-4.829,-80.848)
C5: (35.842,-5.454,-81.831)
O3': (38.190,-1.562,-77.146)
N3: (35.363,-3.331,-82.747)
OP1: (41.502,-6.041,-76.795)
OP2: (39.484,-7.551,-77.174)
C2: (36.028,-2.660,-81.753)
C1': (37.331,-2.768,-79.701)
C3': (38.377,-2.907,-77.589)
O5': (39.674,-5.342,-78.380)
O4': (38.717,-2.870,-79.954)
C5': (40.358,-4.132,-78.695)
P: (40.451,-6.561,-77.704)
C4': (39.437,-2.932,-78.692)
C2': (37.122,-3.377,-78.319)
O2': (35.909,-2.948,-77.738)
N1: (36.605,-3.459,-80.787)
O4: (34.586,-5.153,-83.823)
O2: (36.105,-1.445,-81.732)
C6: (36.499,-4.829,-80.848)
C5: (35.842,-5.454,-81.831)
O3': (38.190,-1.562,-77.146)
OP1: (34.024,6.992,-83.795)
OP2: (32.131,5.669,-84.874)
C3': (36.045,2.719,-84.010)
C1': (34.940,0.975,-82.905)
C5': (34.945,4.508,-82.536)
O4': (34.809,2.131,-82.104)
C8: (32.767,1.753,-83.984)
O2': (37.307,0.831,-83.178)
C6: (31.258,-1.110,-85.333)
C5: (31.982,-0.063,-84.743)
C4: (33.177,-0.394,-84.132)
P: (33.051,5.879,-83.729)
C4': (35.669,3.188,-82.611)
C2': (36.113,1.210,-83.848)
C2: (32.952,-2.521,-84.636)
N1: (31.780,-2.354,-85.261)
N3: (33.725,-1.616,-84.043)
N6: (30.090,-0.938,-85.955)
N7: (31.732,1.298,-84.643)
N9: (33.679,0.785,-83.644)
O5': (33.806,4.520,-83.386)
O3': (37.244,3.298,-84.491)
OP2: (32.131,5.669,-84.874)
C3': (36.045,2.719,-84.010)
C1': (34.940,0.975,-82.905)
C5': (34.945,4.508,-82.536)
O4': (34.809,2.131,-82.104)
C8: (32.767,1.753,-83.984)
O2': (37.307,0.831,-83.178)
C6: (31.258,-1.110,-85.333)
C5: (31.982,-0.063,-84.743)
C4: (33.177,-0.394,-84.132)
P: (33.051,5.879,-83.729)
C4': (35.669,3.188,-82.611)
C2': (36.113,1.210,-83.848)
C2: (32.952,-2.521,-84.636)
N1: (31.780,-2.354,-85.261)
N3: (33.725,-1.616,-84.043)
N6: (30.090,-0.938,-85.955)
N7: (31.732,1.298,-84.643)
N9: (33.679,0.785,-83.644)
O5': (33.806,4.520,-83.386)
O3': (37.244,3.298,-84.491)
Image (generated by PyMOL):