ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K9M:A622:A2378

Extra

PDB:
ATOM 1 O3' C A 621 52.101 121.028 88.161 1.00 32.34 O
ATOM 2 P G A 622 51.365 122.449 88.157 1.00 34.63 P
ATOM 3 OP1 G A 622 52.322 123.460 87.688 1.00 33.54 O
ATOM 4 OP2 G A 622 50.654 122.661 89.450 1.00 33.40 O
ATOM 5 O5' G A 622 50.242 122.215 87.058 1.00 34.44 O
ATOM 6 C5' G A 622 50.580 122.043 85.673 1.00 32.75 C
ATOM 7 C4' G A 622 49.339 122.191 84.848 1.00 30.11 C
ATOM 8 O4' G A 622 48.445 121.093 85.120 1.00 29.30 O
ATOM 9 C3' G A 622 48.526 123.410 85.228 1.00 29.34 C
ATOM 10 O3' G A 622 49.055 124.561 84.578 1.00 30.85 O
ATOM 11 C2' G A 622 47.153 123.027 84.718 1.00 30.15 C
ATOM 12 O2' G A 622 47.152 123.121 83.308 1.00 32.57 O
ATOM 13 C1' G A 622 47.105 121.549 85.108 1.00 28.92 C
ATOM 14 N9 G A 622 46.531 121.333 86.434 1.00 27.19 N
ATOM 15 C8 G A 622 47.152 121.539 87.634 1.00 28.55 C
ATOM 16 N7 G A 622 46.384 121.306 88.658 1.00 28.17 N
ATOM 17 C5 G A 622 45.184 120.907 88.098 1.00 26.82 C
ATOM 18 C6 G A 622 43.980 120.528 88.711 1.00 26.90 C
ATOM 19 O6 G A 622 43.718 120.496 89.905 1.00 29.00 O
ATOM 20 N1 G A 622 43.013 120.165 87.780 1.00 25.20 N
ATOM 21 C2 G A 622 43.183 120.174 86.427 1.00 25.81 C
ATOM 22 N2 G A 622 42.139 119.730 85.693 1.00 26.02 N
ATOM 23 N3 G A 622 44.305 120.569 85.833 1.00 26.72 N
ATOM 24 C4 G A 622 45.259 120.909 86.727 1.00 26.15 C
ATOM 25 P A A 623 48.780 126.021 85.178 1.00 31.12 P
ATOM 26 OP1 A A 623 49.770 126.943 84.583 1.00 30.70 O
ATOM 27 OP2 A A 623 48.686 125.918 86.649 1.00 32.27 O
ATOM 28 O5' A A 623 47.314 126.377 84.672 1.00 30.53 O
TER

ATOM 1 O3' C B2377 60.494 118.155 90.367 1.00 33.42 O
ATOM 2 P G B2378 59.466 118.572 89.206 1.00 33.72 P
ATOM 3 OP1 G B2378 58.247 117.739 89.275 1.00 34.04 O
ATOM 4 OP2 G B2378 60.230 118.641 87.949 1.00 33.96 O
ATOM 5 O5' G B2378 59.086 120.052 89.620 1.00 32.79 O
ATOM 6 C5' G B2378 59.374 121.149 88.764 1.00 34.20 C
ATOM 7 C4' G B2378 58.089 121.749 88.288 1.00 36.45 C
ATOM 8 O4' G B2378 57.529 120.925 87.263 1.00 37.02 O
ATOM 9 C3' G B2378 56.961 121.784 89.306 1.00 36.82 C
ATOM 10 O3' G B2378 57.122 122.911 90.169 1.00 38.21 O
ATOM 11 C2' G B2378 55.737 121.982 88.419 1.00 36.96 C
ATOM 12 O2' G B2378 55.524 123.347 88.117 1.00 38.32 O
ATOM 13 C1' G B2378 56.174 121.281 87.129 1.00 37.22 C
ATOM 14 N9 G B2378 55.399 120.117 86.726 1.00 36.13 N
ATOM 15 C8 G B2378 55.368 118.869 87.297 1.00 34.80 C
ATOM 16 N7 G B2378 54.600 118.034 86.653 1.00 34.24 N
ATOM 17 C5 G B2378 54.093 118.784 85.602 1.00 34.52 C
ATOM 18 C6 G B2378 53.220 118.427 84.545 1.00 33.74 C
ATOM 19 O6 G B2378 52.707 117.341 84.313 1.00 31.88 O
ATOM 20 N1 G B2378 52.964 119.510 83.705 1.00 34.10 N
ATOM 21 C2 G B2378 53.479 120.775 83.858 1.00 34.01 C
ATOM 22 N2 G B2378 53.110 121.691 82.948 1.00 32.28 N
ATOM 23 N3 G B2378 54.293 121.114 84.829 1.00 35.39 N
ATOM 24 C4 G B2378 54.561 120.076 85.654 1.00 35.22 C
ATOM 25 P A B2379 56.686 122.816 91.716 1.00 39.09 P
ATOM 26 OP1 A B2379 55.274 122.346 91.793 1.00 38.33 O
ATOM 27 OP2 A B2379 57.064 124.107 92.322 1.00 39.27 O
ATOM 28 O5' A B2379 57.635 121.699 92.345 1.00 40.02 O
TER

Atoms:
OP1: (52.322,123.460,87.688)
OP2: (50.654,122.661,89.450)
C3': (48.526,123.410,85.228)
C1': (47.105,121.549,85.108)
C5': (50.580,122.043,85.673)
O6: (43.718,120.496,89.905)
O4': (48.445,121.093,85.120)
C8: (47.152,121.539,87.634)
C2: (43.183,120.174,86.427)
C6: (43.980,120.528,88.711)
C5: (45.184,120.907,88.098)
C4: (45.259,120.909,86.727)
P: (51.365,122.449,88.157)
C4': (49.339,122.191,84.848)
C2': (47.153,123.027,84.718)
O2': (47.152,123.121,83.308)
N1: (43.013,120.165,87.780)
N2: (42.139,119.730,85.693)
N3: (44.305,120.569,85.833)
N7: (46.384,121.306,88.658)
N9: (46.531,121.333,86.434)
O5': (50.242,122.215,87.058)
O3': (49.055,124.561,84.578)
OP1: (58.247,117.739,89.275)
OP2: (60.230,118.641,87.949)
C3': (56.961,121.784,89.306)
C1': (56.174,121.281,87.129)
C5': (59.374,121.149,88.764)
O6: (52.707,117.341,84.313)
O4': (57.529,120.925,87.263)
C8: (55.368,118.869,87.297)
C2: (53.479,120.775,83.858)
C6: (53.220,118.427,84.545)
C5: (54.093,118.784,85.602)
C4: (54.561,120.076,85.654)
P: (59.466,118.572,89.206)
C4': (58.089,121.749,88.288)
C2': (55.737,121.982,88.419)
O2': (55.524,123.347,88.117)
N1: (52.964,119.510,83.705)
N2: (53.110,121.691,82.948)
N3: (54.293,121.114,84.829)
N7: (54.600,118.034,86.653)
N9: (55.399,120.117,86.726)
O5': (59.086,120.052,89.620)
O3': (57.122,122.911,90.169)
Image (generated by PyMOL):
PyMOL image
show in jmol