Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A622:A2378
Extra
PDB:
ATOM 1 O3' C A 621 52.119 121.354 88.088 1.00 33.86 O
ATOM 2 P G A 622 51.470 122.813 88.098 1.00 34.21 P
ATOM 3 OP1 G A 622 52.526 123.746 87.683 1.00 35.02 O
ATOM 4 OP2 G A 622 50.759 123.036 89.395 1.00 34.33 O
ATOM 5 O5' G A 622 50.350 122.684 86.975 1.00 35.57 O
ATOM 6 C5' G A 622 50.675 122.425 85.595 1.00 36.16 C
ATOM 7 C4' G A 622 49.422 122.526 84.774 1.00 36.20 C
ATOM 8 O4' G A 622 48.510 121.452 85.126 1.00 35.55 O
ATOM 9 C3' G A 622 48.658 123.766 85.171 1.00 36.73 C
ATOM 10 O3' G A 622 49.165 124.902 84.506 1.00 36.89 O
ATOM 11 C2' G A 622 47.223 123.436 84.806 1.00 37.28 C
ATOM 12 O2' G A 622 47.005 123.708 83.441 1.00 39.98 O
ATOM 13 C1' G A 622 47.166 121.938 85.136 1.00 36.63 C
ATOM 14 N9 G A 622 46.575 121.666 86.448 1.00 36.40 N
ATOM 15 C8 G A 622 47.208 121.791 87.658 1.00 38.34 C
ATOM 16 N7 G A 622 46.436 121.526 88.674 1.00 38.28 N
ATOM 17 C5 G A 622 45.214 121.190 88.109 1.00 36.99 C
ATOM 18 C6 G A 622 43.987 120.823 88.729 1.00 36.80 C
ATOM 19 O6 G A 622 43.729 120.750 89.939 1.00 38.34 O
ATOM 20 N1 G A 622 42.998 120.539 87.792 1.00 33.95 N
ATOM 21 C2 G A 622 43.155 120.611 86.437 1.00 33.91 C
ATOM 22 N2 G A 622 42.082 120.253 85.707 1.00 34.38 N
ATOM 23 N3 G A 622 44.289 120.990 85.839 1.00 35.49 N
ATOM 24 C4 G A 622 45.275 121.256 86.735 1.00 36.16 C
ATOM 25 P A A 623 48.889 126.345 85.121 1.00 37.97 P
ATOM 26 OP1 A A 623 49.842 127.297 84.513 1.00 38.32 O
ATOM 27 OP2 A A 623 48.857 126.201 86.583 1.00 39.13 O
ATOM 28 O5' A A 623 47.397 126.670 84.670 1.00 37.44 O
TER
ATOM 1 O3' C B2377 60.562 118.441 90.331 1.00 36.18 O
ATOM 2 P G B2378 59.541 118.851 89.160 1.00 35.83 P
ATOM 3 OP1 G B2378 58.364 117.966 89.235 1.00 36.18 O
ATOM 4 OP2 G B2378 60.268 118.991 87.884 1.00 36.17 O
ATOM 5 O5' G B2378 59.098 120.316 89.571 1.00 36.19 O
ATOM 6 C5' G B2378 59.383 121.434 88.724 1.00 38.70 C
ATOM 7 C4' G B2378 58.094 122.049 88.251 1.00 41.31 C
ATOM 8 O4' G B2378 57.509 121.252 87.212 1.00 42.08 O
ATOM 9 C3' G B2378 56.985 122.074 89.288 1.00 43.42 C
ATOM 10 O3' G B2378 57.174 123.203 90.129 1.00 46.45 O
ATOM 11 C2' G B2378 55.724 122.241 88.440 1.00 42.90 C
ATOM 12 O2' G B2378 55.396 123.583 88.155 1.00 44.78 O
ATOM 13 C1' G B2378 56.141 121.591 87.122 1.00 42.69 C
ATOM 14 N9 G B2378 55.365 120.420 86.735 1.00 41.39 N
ATOM 15 C8 G B2378 55.357 119.175 87.317 1.00 40.91 C
ATOM 16 N7 G B2378 54.603 118.319 86.683 1.00 41.02 N
ATOM 17 C5 G B2378 54.073 119.050 85.625 1.00 40.23 C
ATOM 18 C6 G B2378 53.214 118.663 84.563 1.00 38.80 C
ATOM 19 O6 G B2378 52.736 117.554 84.326 1.00 38.00 O
ATOM 20 N1 G B2378 52.934 119.736 83.711 1.00 37.58 N
ATOM 21 C2 G B2378 53.420 121.012 83.848 1.00 36.99 C
ATOM 22 N2 G B2378 53.065 121.898 82.912 1.00 32.00 N
ATOM 23 N3 G B2378 54.212 121.385 84.827 1.00 39.32 N
ATOM 24 C4 G B2378 54.508 120.358 85.668 1.00 40.64 C
ATOM 25 P A B2379 56.778 123.137 91.688 1.00 49.00 P
ATOM 26 OP1 A B2379 55.355 122.718 91.849 1.00 47.31 O
ATOM 27 OP2 A B2379 57.231 124.446 92.216 1.00 49.89 O
ATOM 28 O5' A B2379 57.701 122.004 92.331 1.00 48.01 O
TER
ATOM 2 P G A 622 51.470 122.813 88.098 1.00 34.21 P
ATOM 3 OP1 G A 622 52.526 123.746 87.683 1.00 35.02 O
ATOM 4 OP2 G A 622 50.759 123.036 89.395 1.00 34.33 O
ATOM 5 O5' G A 622 50.350 122.684 86.975 1.00 35.57 O
ATOM 6 C5' G A 622 50.675 122.425 85.595 1.00 36.16 C
ATOM 7 C4' G A 622 49.422 122.526 84.774 1.00 36.20 C
ATOM 8 O4' G A 622 48.510 121.452 85.126 1.00 35.55 O
ATOM 9 C3' G A 622 48.658 123.766 85.171 1.00 36.73 C
ATOM 10 O3' G A 622 49.165 124.902 84.506 1.00 36.89 O
ATOM 11 C2' G A 622 47.223 123.436 84.806 1.00 37.28 C
ATOM 12 O2' G A 622 47.005 123.708 83.441 1.00 39.98 O
ATOM 13 C1' G A 622 47.166 121.938 85.136 1.00 36.63 C
ATOM 14 N9 G A 622 46.575 121.666 86.448 1.00 36.40 N
ATOM 15 C8 G A 622 47.208 121.791 87.658 1.00 38.34 C
ATOM 16 N7 G A 622 46.436 121.526 88.674 1.00 38.28 N
ATOM 17 C5 G A 622 45.214 121.190 88.109 1.00 36.99 C
ATOM 18 C6 G A 622 43.987 120.823 88.729 1.00 36.80 C
ATOM 19 O6 G A 622 43.729 120.750 89.939 1.00 38.34 O
ATOM 20 N1 G A 622 42.998 120.539 87.792 1.00 33.95 N
ATOM 21 C2 G A 622 43.155 120.611 86.437 1.00 33.91 C
ATOM 22 N2 G A 622 42.082 120.253 85.707 1.00 34.38 N
ATOM 23 N3 G A 622 44.289 120.990 85.839 1.00 35.49 N
ATOM 24 C4 G A 622 45.275 121.256 86.735 1.00 36.16 C
ATOM 25 P A A 623 48.889 126.345 85.121 1.00 37.97 P
ATOM 26 OP1 A A 623 49.842 127.297 84.513 1.00 38.32 O
ATOM 27 OP2 A A 623 48.857 126.201 86.583 1.00 39.13 O
ATOM 28 O5' A A 623 47.397 126.670 84.670 1.00 37.44 O
TER
ATOM 1 O3' C B2377 60.562 118.441 90.331 1.00 36.18 O
ATOM 2 P G B2378 59.541 118.851 89.160 1.00 35.83 P
ATOM 3 OP1 G B2378 58.364 117.966 89.235 1.00 36.18 O
ATOM 4 OP2 G B2378 60.268 118.991 87.884 1.00 36.17 O
ATOM 5 O5' G B2378 59.098 120.316 89.571 1.00 36.19 O
ATOM 6 C5' G B2378 59.383 121.434 88.724 1.00 38.70 C
ATOM 7 C4' G B2378 58.094 122.049 88.251 1.00 41.31 C
ATOM 8 O4' G B2378 57.509 121.252 87.212 1.00 42.08 O
ATOM 9 C3' G B2378 56.985 122.074 89.288 1.00 43.42 C
ATOM 10 O3' G B2378 57.174 123.203 90.129 1.00 46.45 O
ATOM 11 C2' G B2378 55.724 122.241 88.440 1.00 42.90 C
ATOM 12 O2' G B2378 55.396 123.583 88.155 1.00 44.78 O
ATOM 13 C1' G B2378 56.141 121.591 87.122 1.00 42.69 C
ATOM 14 N9 G B2378 55.365 120.420 86.735 1.00 41.39 N
ATOM 15 C8 G B2378 55.357 119.175 87.317 1.00 40.91 C
ATOM 16 N7 G B2378 54.603 118.319 86.683 1.00 41.02 N
ATOM 17 C5 G B2378 54.073 119.050 85.625 1.00 40.23 C
ATOM 18 C6 G B2378 53.214 118.663 84.563 1.00 38.80 C
ATOM 19 O6 G B2378 52.736 117.554 84.326 1.00 38.00 O
ATOM 20 N1 G B2378 52.934 119.736 83.711 1.00 37.58 N
ATOM 21 C2 G B2378 53.420 121.012 83.848 1.00 36.99 C
ATOM 22 N2 G B2378 53.065 121.898 82.912 1.00 32.00 N
ATOM 23 N3 G B2378 54.212 121.385 84.827 1.00 39.32 N
ATOM 24 C4 G B2378 54.508 120.358 85.668 1.00 40.64 C
ATOM 25 P A B2379 56.778 123.137 91.688 1.00 49.00 P
ATOM 26 OP1 A B2379 55.355 122.718 91.849 1.00 47.31 O
ATOM 27 OP2 A B2379 57.231 124.446 92.216 1.00 49.89 O
ATOM 28 O5' A B2379 57.701 122.004 92.331 1.00 48.01 O
TER
Atoms:
OP1: (52.526,123.746,87.683)
OP2: (50.759,123.036,89.395)
C3': (48.658,123.766,85.171)
C1': (47.166,121.938,85.136)
C5': (50.675,122.425,85.595)
O6: (43.729,120.750,89.939)
O4': (48.510,121.452,85.126)
C8: (47.208,121.791,87.658)
C2: (43.155,120.611,86.437)
C6: (43.987,120.823,88.729)
C5: (45.214,121.190,88.109)
C4: (45.275,121.256,86.735)
P: (51.470,122.813,88.098)
C4': (49.422,122.526,84.774)
C2': (47.223,123.436,84.806)
O2': (47.005,123.708,83.441)
N1: (42.998,120.539,87.792)
N2: (42.082,120.253,85.707)
N3: (44.289,120.990,85.839)
N7: (46.436,121.526,88.674)
N9: (46.575,121.666,86.448)
O5': (50.350,122.684,86.975)
O3': (49.165,124.902,84.506)
OP2: (50.759,123.036,89.395)
C3': (48.658,123.766,85.171)
C1': (47.166,121.938,85.136)
C5': (50.675,122.425,85.595)
O6: (43.729,120.750,89.939)
O4': (48.510,121.452,85.126)
C8: (47.208,121.791,87.658)
C2: (43.155,120.611,86.437)
C6: (43.987,120.823,88.729)
C5: (45.214,121.190,88.109)
C4: (45.275,121.256,86.735)
P: (51.470,122.813,88.098)
C4': (49.422,122.526,84.774)
C2': (47.223,123.436,84.806)
O2': (47.005,123.708,83.441)
N1: (42.998,120.539,87.792)
N2: (42.082,120.253,85.707)
N3: (44.289,120.990,85.839)
N7: (46.436,121.526,88.674)
N9: (46.575,121.666,86.448)
O5': (50.350,122.684,86.975)
O3': (49.165,124.902,84.506)
OP1: (58.364,117.966,89.235)
OP2: (60.268,118.991,87.884)
C3': (56.985,122.074,89.288)
C1': (56.141,121.591,87.122)
C5': (59.383,121.434,88.724)
O6: (52.736,117.554,84.326)
O4': (57.509,121.252,87.212)
C8: (55.357,119.175,87.317)
C2: (53.420,121.012,83.848)
C6: (53.214,118.663,84.563)
C5: (54.073,119.050,85.625)
C4: (54.508,120.358,85.668)
P: (59.541,118.851,89.160)
C4': (58.094,122.049,88.251)
C2': (55.724,122.241,88.440)
O2': (55.396,123.583,88.155)
N1: (52.934,119.736,83.711)
N2: (53.065,121.898,82.912)
N3: (54.212,121.385,84.827)
N7: (54.603,118.319,86.683)
N9: (55.365,120.420,86.735)
O5': (59.098,120.316,89.571)
O3': (57.174,123.203,90.129)
OP2: (60.268,118.991,87.884)
C3': (56.985,122.074,89.288)
C1': (56.141,121.591,87.122)
C5': (59.383,121.434,88.724)
O6: (52.736,117.554,84.326)
O4': (57.509,121.252,87.212)
C8: (55.357,119.175,87.317)
C2: (53.420,121.012,83.848)
C6: (53.214,118.663,84.563)
C5: (54.073,119.050,85.625)
C4: (54.508,120.358,85.668)
P: (59.541,118.851,89.160)
C4': (58.094,122.049,88.251)
C2': (55.724,122.241,88.440)
O2': (55.396,123.583,88.155)
N1: (52.934,119.736,83.711)
N2: (53.065,121.898,82.912)
N3: (54.212,121.385,84.827)
N7: (54.603,118.319,86.683)
N9: (55.365,120.420,86.735)
O5': (59.098,120.316,89.571)
O3': (57.174,123.203,90.129)
Image (generated by PyMOL):