Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0622:02378
Extra
PDB:
ATOM 1 O3' C A 621 52.198 121.534 87.833 1.00 32.23 O
ATOM 2 P G A 622 51.550 123.002 87.794 1.00 34.65 P
ATOM 3 OP1 G A 622 52.573 123.931 87.233 1.00 34.74 O
ATOM 4 OP2 G A 622 50.927 123.301 89.106 1.00 32.23 O
ATOM 5 O5' G A 622 50.361 122.857 86.750 1.00 33.32 O
ATOM 6 C5' G A 622 50.616 122.488 85.390 1.00 31.84 C
ATOM 7 C4' G A 622 49.342 122.563 84.594 1.00 32.55 C
ATOM 8 O4' G A 622 48.471 121.442 84.897 1.00 32.55 O
ATOM 9 C3' G A 622 48.488 123.784 84.872 1.00 31.75 C
ATOM 10 O3' G A 622 48.985 124.898 84.147 1.00 33.09 O
ATOM 11 C2' G A 622 47.133 123.322 84.367 1.00 31.80 C
ATOM 12 O2' G A 622 47.132 123.322 82.958 1.00 32.71 O
ATOM 13 C1' G A 622 47.117 121.866 84.841 1.00 31.47 C
ATOM 14 N9 G A 622 46.523 121.672 86.164 1.00 31.97 N
ATOM 15 C8 G A 622 47.150 121.840 87.377 1.00 32.23 C
ATOM 16 N7 G A 622 46.381 121.573 88.395 1.00 31.98 N
ATOM 17 C5 G A 622 45.167 121.215 87.825 1.00 33.53 C
ATOM 18 C6 G A 622 43.945 120.821 88.437 1.00 34.86 C
ATOM 19 O6 G A 622 43.685 120.714 89.643 1.00 36.36 O
ATOM 20 N1 G A 622 42.966 120.540 87.490 1.00 34.57 N
ATOM 21 C2 G A 622 43.132 120.629 86.137 1.00 33.11 C
ATOM 22 N2 G A 622 42.069 120.313 85.403 1.00 33.05 N
ATOM 23 N3 G A 622 44.261 120.998 85.550 1.00 34.61 N
ATOM 24 C4 G A 622 45.233 121.273 86.450 1.00 32.92 C
ATOM 25 P A A 623 48.830 126.376 84.744 1.00 32.35 P
ATOM 26 OP1 A A 623 49.782 127.234 84.008 1.00 34.32 O
ATOM 27 OP2 A A 623 48.864 126.331 86.228 1.00 33.48 O
ATOM 28 O5' A A 623 47.362 126.820 84.337 1.00 35.30 O
TER
ATOM 1 O3' C B2377 60.399 118.424 89.984 1.00 37.80 O
ATOM 2 P G B2378 59.428 118.808 88.766 1.00 36.54 P
ATOM 3 OP1 G B2378 58.199 117.980 88.885 1.00 37.30 O
ATOM 4 OP2 G B2378 60.204 118.788 87.502 1.00 37.05 O
ATOM 5 O5' G B2378 59.046 120.314 89.099 1.00 37.50 O
ATOM 6 C5' G B2378 59.393 121.392 88.221 1.00 38.68 C
ATOM 7 C4' G B2378 58.139 121.991 87.643 1.00 41.84 C
ATOM 8 O4' G B2378 57.553 121.062 86.713 1.00 43.10 O
ATOM 9 C3' G B2378 57.006 122.193 88.639 1.00 43.43 C
ATOM 10 O3' G B2378 57.240 123.421 89.335 1.00 47.39 O
ATOM 11 C2' G B2378 55.762 122.248 87.741 1.00 42.00 C
ATOM 12 O2' G B2378 55.440 123.552 87.306 1.00 40.15 O
ATOM 13 C1' G B2378 56.215 121.442 86.514 1.00 43.17 C
ATOM 14 N9 G B2378 55.439 120.283 86.082 1.00 42.93 N
ATOM 15 C8 G B2378 55.434 119.019 86.622 1.00 42.14 C
ATOM 16 N7 G B2378 54.653 118.192 85.978 1.00 41.44 N
ATOM 17 C5 G B2378 54.104 118.958 84.957 1.00 42.14 C
ATOM 18 C6 G B2378 53.180 118.608 83.932 1.00 41.82 C
ATOM 19 O6 G B2378 52.636 117.518 83.726 1.00 41.75 O
ATOM 20 N1 G B2378 52.899 119.691 83.103 1.00 41.38 N
ATOM 21 C2 G B2378 53.428 120.951 83.241 1.00 42.24 C
ATOM 22 N2 G B2378 53.036 121.865 82.341 1.00 38.70 N
ATOM 23 N3 G B2378 54.282 121.292 84.194 1.00 43.21 N
ATOM 24 C4 G B2378 54.575 120.252 85.010 1.00 42.55 C
ATOM 25 P A B2379 56.736 123.616 90.851 1.00 49.26 P
ATOM 26 OP1 A B2379 55.277 123.354 90.906 1.00 51.76 O
ATOM 27 OP2 A B2379 57.260 124.948 91.255 1.00 50.58 O
ATOM 28 O5' A B2379 57.438 122.465 91.707 1.00 46.93 O
TER
ATOM 2 P G A 622 51.550 123.002 87.794 1.00 34.65 P
ATOM 3 OP1 G A 622 52.573 123.931 87.233 1.00 34.74 O
ATOM 4 OP2 G A 622 50.927 123.301 89.106 1.00 32.23 O
ATOM 5 O5' G A 622 50.361 122.857 86.750 1.00 33.32 O
ATOM 6 C5' G A 622 50.616 122.488 85.390 1.00 31.84 C
ATOM 7 C4' G A 622 49.342 122.563 84.594 1.00 32.55 C
ATOM 8 O4' G A 622 48.471 121.442 84.897 1.00 32.55 O
ATOM 9 C3' G A 622 48.488 123.784 84.872 1.00 31.75 C
ATOM 10 O3' G A 622 48.985 124.898 84.147 1.00 33.09 O
ATOM 11 C2' G A 622 47.133 123.322 84.367 1.00 31.80 C
ATOM 12 O2' G A 622 47.132 123.322 82.958 1.00 32.71 O
ATOM 13 C1' G A 622 47.117 121.866 84.841 1.00 31.47 C
ATOM 14 N9 G A 622 46.523 121.672 86.164 1.00 31.97 N
ATOM 15 C8 G A 622 47.150 121.840 87.377 1.00 32.23 C
ATOM 16 N7 G A 622 46.381 121.573 88.395 1.00 31.98 N
ATOM 17 C5 G A 622 45.167 121.215 87.825 1.00 33.53 C
ATOM 18 C6 G A 622 43.945 120.821 88.437 1.00 34.86 C
ATOM 19 O6 G A 622 43.685 120.714 89.643 1.00 36.36 O
ATOM 20 N1 G A 622 42.966 120.540 87.490 1.00 34.57 N
ATOM 21 C2 G A 622 43.132 120.629 86.137 1.00 33.11 C
ATOM 22 N2 G A 622 42.069 120.313 85.403 1.00 33.05 N
ATOM 23 N3 G A 622 44.261 120.998 85.550 1.00 34.61 N
ATOM 24 C4 G A 622 45.233 121.273 86.450 1.00 32.92 C
ATOM 25 P A A 623 48.830 126.376 84.744 1.00 32.35 P
ATOM 26 OP1 A A 623 49.782 127.234 84.008 1.00 34.32 O
ATOM 27 OP2 A A 623 48.864 126.331 86.228 1.00 33.48 O
ATOM 28 O5' A A 623 47.362 126.820 84.337 1.00 35.30 O
TER
ATOM 1 O3' C B2377 60.399 118.424 89.984 1.00 37.80 O
ATOM 2 P G B2378 59.428 118.808 88.766 1.00 36.54 P
ATOM 3 OP1 G B2378 58.199 117.980 88.885 1.00 37.30 O
ATOM 4 OP2 G B2378 60.204 118.788 87.502 1.00 37.05 O
ATOM 5 O5' G B2378 59.046 120.314 89.099 1.00 37.50 O
ATOM 6 C5' G B2378 59.393 121.392 88.221 1.00 38.68 C
ATOM 7 C4' G B2378 58.139 121.991 87.643 1.00 41.84 C
ATOM 8 O4' G B2378 57.553 121.062 86.713 1.00 43.10 O
ATOM 9 C3' G B2378 57.006 122.193 88.639 1.00 43.43 C
ATOM 10 O3' G B2378 57.240 123.421 89.335 1.00 47.39 O
ATOM 11 C2' G B2378 55.762 122.248 87.741 1.00 42.00 C
ATOM 12 O2' G B2378 55.440 123.552 87.306 1.00 40.15 O
ATOM 13 C1' G B2378 56.215 121.442 86.514 1.00 43.17 C
ATOM 14 N9 G B2378 55.439 120.283 86.082 1.00 42.93 N
ATOM 15 C8 G B2378 55.434 119.019 86.622 1.00 42.14 C
ATOM 16 N7 G B2378 54.653 118.192 85.978 1.00 41.44 N
ATOM 17 C5 G B2378 54.104 118.958 84.957 1.00 42.14 C
ATOM 18 C6 G B2378 53.180 118.608 83.932 1.00 41.82 C
ATOM 19 O6 G B2378 52.636 117.518 83.726 1.00 41.75 O
ATOM 20 N1 G B2378 52.899 119.691 83.103 1.00 41.38 N
ATOM 21 C2 G B2378 53.428 120.951 83.241 1.00 42.24 C
ATOM 22 N2 G B2378 53.036 121.865 82.341 1.00 38.70 N
ATOM 23 N3 G B2378 54.282 121.292 84.194 1.00 43.21 N
ATOM 24 C4 G B2378 54.575 120.252 85.010 1.00 42.55 C
ATOM 25 P A B2379 56.736 123.616 90.851 1.00 49.26 P
ATOM 26 OP1 A B2379 55.277 123.354 90.906 1.00 51.76 O
ATOM 27 OP2 A B2379 57.260 124.948 91.255 1.00 50.58 O
ATOM 28 O5' A B2379 57.438 122.465 91.707 1.00 46.93 O
TER
Atoms:
OP1: (52.573,123.931,87.233)
OP2: (50.927,123.301,89.106)
C3': (48.488,123.784,84.872)
C1': (47.117,121.866,84.841)
C5': (50.616,122.488,85.390)
O6: (43.685,120.714,89.643)
O4': (48.471,121.442,84.897)
C8: (47.150,121.840,87.377)
C2: (43.132,120.629,86.137)
C6: (43.945,120.821,88.437)
C5: (45.167,121.215,87.825)
C4: (45.233,121.273,86.450)
P: (51.550,123.002,87.794)
C4': (49.342,122.563,84.594)
C2': (47.133,123.322,84.367)
O2': (47.132,123.322,82.958)
N1: (42.966,120.540,87.490)
N2: (42.069,120.313,85.403)
N3: (44.261,120.998,85.550)
N7: (46.381,121.573,88.395)
N9: (46.523,121.672,86.164)
O5': (50.361,122.857,86.750)
O3': (48.985,124.898,84.147)
OP2: (50.927,123.301,89.106)
C3': (48.488,123.784,84.872)
C1': (47.117,121.866,84.841)
C5': (50.616,122.488,85.390)
O6: (43.685,120.714,89.643)
O4': (48.471,121.442,84.897)
C8: (47.150,121.840,87.377)
C2: (43.132,120.629,86.137)
C6: (43.945,120.821,88.437)
C5: (45.167,121.215,87.825)
C4: (45.233,121.273,86.450)
P: (51.550,123.002,87.794)
C4': (49.342,122.563,84.594)
C2': (47.133,123.322,84.367)
O2': (47.132,123.322,82.958)
N1: (42.966,120.540,87.490)
N2: (42.069,120.313,85.403)
N3: (44.261,120.998,85.550)
N7: (46.381,121.573,88.395)
N9: (46.523,121.672,86.164)
O5': (50.361,122.857,86.750)
O3': (48.985,124.898,84.147)
OP1: (58.199,117.980,88.885)
OP2: (60.204,118.788,87.502)
C3': (57.006,122.193,88.639)
C1': (56.215,121.442,86.514)
C5': (59.393,121.392,88.221)
O6: (52.636,117.518,83.726)
O4': (57.553,121.062,86.713)
C8: (55.434,119.019,86.622)
C2: (53.428,120.951,83.241)
C6: (53.180,118.608,83.932)
C5: (54.104,118.958,84.957)
C4: (54.575,120.252,85.010)
P: (59.428,118.808,88.766)
C4': (58.139,121.991,87.643)
C2': (55.762,122.248,87.741)
O2': (55.440,123.552,87.306)
N1: (52.899,119.691,83.103)
N2: (53.036,121.865,82.341)
N3: (54.282,121.292,84.194)
N7: (54.653,118.192,85.978)
N9: (55.439,120.283,86.082)
O5': (59.046,120.314,89.099)
O3': (57.240,123.421,89.335)
OP2: (60.204,118.788,87.502)
C3': (57.006,122.193,88.639)
C1': (56.215,121.442,86.514)
C5': (59.393,121.392,88.221)
O6: (52.636,117.518,83.726)
O4': (57.553,121.062,86.713)
C8: (55.434,119.019,86.622)
C2: (53.428,120.951,83.241)
C6: (53.180,118.608,83.932)
C5: (54.104,118.958,84.957)
C4: (54.575,120.252,85.010)
P: (59.428,118.808,88.766)
C4': (58.139,121.991,87.643)
C2': (55.762,122.248,87.741)
O2': (55.440,123.552,87.306)
N1: (52.899,119.691,83.103)
N2: (53.036,121.865,82.341)
N3: (54.282,121.292,84.194)
N7: (54.653,118.192,85.978)
N9: (55.439,120.283,86.082)
O5': (59.046,120.314,89.099)
O3': (57.240,123.421,89.335)
Image (generated by PyMOL):