Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0622:02378
Extra
PDB:
ATOM 1 O3' C A 621 52.394 121.529 88.062 1.00 36.21 O
ATOM 2 P G A 622 51.740 122.989 88.079 1.00 39.38 P
ATOM 3 OP1 G A 622 52.719 123.957 87.531 1.00 39.18 O
ATOM 4 OP2 G A 622 51.142 123.219 89.411 1.00 40.08 O
ATOM 5 O5' G A 622 50.553 122.867 87.038 1.00 38.45 O
ATOM 6 C5' G A 622 50.815 122.527 85.671 1.00 38.80 C
ATOM 7 C4' G A 622 49.585 122.766 84.844 1.00 38.56 C
ATOM 8 O4' G A 622 48.631 121.686 85.008 1.00 37.85 O
ATOM 9 C3' G A 622 48.816 124.011 85.233 1.00 37.46 C
ATOM 10 O3' G A 622 49.419 125.159 84.661 1.00 39.42 O
ATOM 11 C2' G A 622 47.447 123.702 84.661 1.00 38.59 C
ATOM 12 O2' G A 622 47.486 123.846 83.257 1.00 38.47 O
ATOM 13 C1' G A 622 47.314 122.213 84.999 1.00 38.19 C
ATOM 14 N9 G A 622 46.723 121.948 86.310 1.00 38.14 N
ATOM 15 C8 G A 622 47.360 122.060 87.520 1.00 39.57 C
ATOM 16 N7 G A 622 46.606 121.742 88.532 1.00 38.70 N
ATOM 17 C5 G A 622 45.391 121.401 87.961 1.00 40.02 C
ATOM 18 C6 G A 622 44.203 120.966 88.567 1.00 39.26 C
ATOM 19 O6 G A 622 43.987 120.783 89.760 1.00 43.18 O
ATOM 20 N1 G A 622 43.202 120.733 87.637 1.00 37.15 N
ATOM 21 C2 G A 622 43.333 120.891 86.291 1.00 38.64 C
ATOM 22 N2 G A 622 42.246 120.612 85.566 1.00 37.50 N
ATOM 23 N3 G A 622 44.450 121.293 85.698 1.00 39.99 N
ATOM 24 C4 G A 622 45.436 121.528 86.592 1.00 39.40 C
ATOM 25 P A A 623 49.049 126.611 85.217 1.00 41.07 P
ATOM 26 OP1 A A 623 49.922 127.583 84.527 1.00 41.76 O
ATOM 27 OP2 A A 623 48.993 126.604 86.697 1.00 43.22 O
ATOM 28 O5' A A 623 47.565 126.823 84.708 1.00 41.25 O
TER
ATOM 1 O3' C B2377 60.689 118.457 90.304 1.00 38.53 O
ATOM 2 P G B2378 59.716 118.825 89.086 1.00 39.63 P
ATOM 3 OP1 G B2378 58.611 117.839 89.086 1.00 42.38 O
ATOM 4 OP2 G B2378 60.518 119.027 87.853 1.00 39.19 O
ATOM 5 O5' G B2378 59.109 120.224 89.513 1.00 39.38 O
ATOM 6 C5' G B2378 59.508 121.431 88.860 1.00 42.02 C
ATOM 7 C4' G B2378 58.295 122.123 88.307 1.00 44.49 C
ATOM 8 O4' G B2378 57.758 121.339 87.226 1.00 45.06 O
ATOM 9 C3' G B2378 57.130 122.202 89.275 1.00 44.56 C
ATOM 10 O3' G B2378 57.330 123.350 90.095 1.00 47.43 O
ATOM 11 C2' G B2378 55.936 122.387 88.342 1.00 43.22 C
ATOM 12 O2' G B2378 55.762 123.736 87.997 1.00 44.52 O
ATOM 13 C1' G B2378 56.403 121.666 87.072 1.00 43.50 C
ATOM 14 N9 G B2378 55.679 120.478 86.635 1.00 42.66 N
ATOM 15 C8 G B2378 55.730 119.216 87.170 1.00 41.80 C
ATOM 16 N7 G B2378 54.994 118.357 86.520 1.00 41.58 N
ATOM 17 C5 G B2378 54.416 119.102 85.502 1.00 41.64 C
ATOM 18 C6 G B2378 53.527 118.712 84.473 1.00 41.49 C
ATOM 19 O6 G B2378 53.041 117.599 84.263 1.00 43.72 O
ATOM 20 N1 G B2378 53.206 119.780 83.641 1.00 41.00 N
ATOM 21 C2 G B2378 53.672 121.064 83.790 1.00 41.63 C
ATOM 22 N2 G B2378 53.259 121.963 82.884 1.00 40.14 N
ATOM 23 N3 G B2378 54.489 121.441 84.755 1.00 41.86 N
ATOM 24 C4 G B2378 54.823 120.413 85.565 1.00 41.94 C
ATOM 25 P A B2379 57.013 123.295 91.667 1.00 49.48 P
ATOM 26 OP1 A B2379 55.622 122.807 91.844 1.00 51.04 O
ATOM 27 OP2 A B2379 57.408 124.617 92.214 1.00 49.25 O
ATOM 28 O5' A B2379 57.988 122.185 92.257 1.00 49.90 O
TER
ATOM 2 P G A 622 51.740 122.989 88.079 1.00 39.38 P
ATOM 3 OP1 G A 622 52.719 123.957 87.531 1.00 39.18 O
ATOM 4 OP2 G A 622 51.142 123.219 89.411 1.00 40.08 O
ATOM 5 O5' G A 622 50.553 122.867 87.038 1.00 38.45 O
ATOM 6 C5' G A 622 50.815 122.527 85.671 1.00 38.80 C
ATOM 7 C4' G A 622 49.585 122.766 84.844 1.00 38.56 C
ATOM 8 O4' G A 622 48.631 121.686 85.008 1.00 37.85 O
ATOM 9 C3' G A 622 48.816 124.011 85.233 1.00 37.46 C
ATOM 10 O3' G A 622 49.419 125.159 84.661 1.00 39.42 O
ATOM 11 C2' G A 622 47.447 123.702 84.661 1.00 38.59 C
ATOM 12 O2' G A 622 47.486 123.846 83.257 1.00 38.47 O
ATOM 13 C1' G A 622 47.314 122.213 84.999 1.00 38.19 C
ATOM 14 N9 G A 622 46.723 121.948 86.310 1.00 38.14 N
ATOM 15 C8 G A 622 47.360 122.060 87.520 1.00 39.57 C
ATOM 16 N7 G A 622 46.606 121.742 88.532 1.00 38.70 N
ATOM 17 C5 G A 622 45.391 121.401 87.961 1.00 40.02 C
ATOM 18 C6 G A 622 44.203 120.966 88.567 1.00 39.26 C
ATOM 19 O6 G A 622 43.987 120.783 89.760 1.00 43.18 O
ATOM 20 N1 G A 622 43.202 120.733 87.637 1.00 37.15 N
ATOM 21 C2 G A 622 43.333 120.891 86.291 1.00 38.64 C
ATOM 22 N2 G A 622 42.246 120.612 85.566 1.00 37.50 N
ATOM 23 N3 G A 622 44.450 121.293 85.698 1.00 39.99 N
ATOM 24 C4 G A 622 45.436 121.528 86.592 1.00 39.40 C
ATOM 25 P A A 623 49.049 126.611 85.217 1.00 41.07 P
ATOM 26 OP1 A A 623 49.922 127.583 84.527 1.00 41.76 O
ATOM 27 OP2 A A 623 48.993 126.604 86.697 1.00 43.22 O
ATOM 28 O5' A A 623 47.565 126.823 84.708 1.00 41.25 O
TER
ATOM 1 O3' C B2377 60.689 118.457 90.304 1.00 38.53 O
ATOM 2 P G B2378 59.716 118.825 89.086 1.00 39.63 P
ATOM 3 OP1 G B2378 58.611 117.839 89.086 1.00 42.38 O
ATOM 4 OP2 G B2378 60.518 119.027 87.853 1.00 39.19 O
ATOM 5 O5' G B2378 59.109 120.224 89.513 1.00 39.38 O
ATOM 6 C5' G B2378 59.508 121.431 88.860 1.00 42.02 C
ATOM 7 C4' G B2378 58.295 122.123 88.307 1.00 44.49 C
ATOM 8 O4' G B2378 57.758 121.339 87.226 1.00 45.06 O
ATOM 9 C3' G B2378 57.130 122.202 89.275 1.00 44.56 C
ATOM 10 O3' G B2378 57.330 123.350 90.095 1.00 47.43 O
ATOM 11 C2' G B2378 55.936 122.387 88.342 1.00 43.22 C
ATOM 12 O2' G B2378 55.762 123.736 87.997 1.00 44.52 O
ATOM 13 C1' G B2378 56.403 121.666 87.072 1.00 43.50 C
ATOM 14 N9 G B2378 55.679 120.478 86.635 1.00 42.66 N
ATOM 15 C8 G B2378 55.730 119.216 87.170 1.00 41.80 C
ATOM 16 N7 G B2378 54.994 118.357 86.520 1.00 41.58 N
ATOM 17 C5 G B2378 54.416 119.102 85.502 1.00 41.64 C
ATOM 18 C6 G B2378 53.527 118.712 84.473 1.00 41.49 C
ATOM 19 O6 G B2378 53.041 117.599 84.263 1.00 43.72 O
ATOM 20 N1 G B2378 53.206 119.780 83.641 1.00 41.00 N
ATOM 21 C2 G B2378 53.672 121.064 83.790 1.00 41.63 C
ATOM 22 N2 G B2378 53.259 121.963 82.884 1.00 40.14 N
ATOM 23 N3 G B2378 54.489 121.441 84.755 1.00 41.86 N
ATOM 24 C4 G B2378 54.823 120.413 85.565 1.00 41.94 C
ATOM 25 P A B2379 57.013 123.295 91.667 1.00 49.48 P
ATOM 26 OP1 A B2379 55.622 122.807 91.844 1.00 51.04 O
ATOM 27 OP2 A B2379 57.408 124.617 92.214 1.00 49.25 O
ATOM 28 O5' A B2379 57.988 122.185 92.257 1.00 49.90 O
TER
Atoms:
OP1: (52.719,123.957,87.531)
OP2: (51.142,123.219,89.411)
C3': (48.816,124.011,85.233)
C1': (47.314,122.213,84.999)
C5': (50.815,122.527,85.671)
O6: (43.987,120.783,89.760)
O4': (48.631,121.686,85.008)
C8: (47.360,122.060,87.520)
C2: (43.333,120.891,86.291)
C6: (44.203,120.966,88.567)
C5: (45.391,121.401,87.961)
C4: (45.436,121.528,86.592)
P: (51.740,122.989,88.079)
C4': (49.585,122.766,84.844)
C2': (47.447,123.702,84.661)
O2': (47.486,123.846,83.257)
N1: (43.202,120.733,87.637)
N2: (42.246,120.612,85.566)
N3: (44.450,121.293,85.698)
N7: (46.606,121.742,88.532)
N9: (46.723,121.948,86.310)
O5': (50.553,122.867,87.038)
O3': (49.419,125.159,84.661)
OP2: (51.142,123.219,89.411)
C3': (48.816,124.011,85.233)
C1': (47.314,122.213,84.999)
C5': (50.815,122.527,85.671)
O6: (43.987,120.783,89.760)
O4': (48.631,121.686,85.008)
C8: (47.360,122.060,87.520)
C2: (43.333,120.891,86.291)
C6: (44.203,120.966,88.567)
C5: (45.391,121.401,87.961)
C4: (45.436,121.528,86.592)
P: (51.740,122.989,88.079)
C4': (49.585,122.766,84.844)
C2': (47.447,123.702,84.661)
O2': (47.486,123.846,83.257)
N1: (43.202,120.733,87.637)
N2: (42.246,120.612,85.566)
N3: (44.450,121.293,85.698)
N7: (46.606,121.742,88.532)
N9: (46.723,121.948,86.310)
O5': (50.553,122.867,87.038)
O3': (49.419,125.159,84.661)
OP1: (58.611,117.839,89.086)
OP2: (60.518,119.027,87.853)
C3': (57.130,122.202,89.275)
C1': (56.403,121.666,87.072)
C5': (59.508,121.431,88.860)
O6: (53.041,117.599,84.263)
O4': (57.758,121.339,87.226)
C8: (55.730,119.216,87.170)
C2: (53.672,121.064,83.790)
C6: (53.527,118.712,84.473)
C5: (54.416,119.102,85.502)
C4: (54.823,120.413,85.565)
P: (59.716,118.825,89.086)
C4': (58.295,122.123,88.307)
C2': (55.936,122.387,88.342)
O2': (55.762,123.736,87.997)
N1: (53.206,119.780,83.641)
N2: (53.259,121.963,82.884)
N3: (54.489,121.441,84.755)
N7: (54.994,118.357,86.520)
N9: (55.679,120.478,86.635)
O5': (59.109,120.224,89.513)
O3': (57.330,123.350,90.095)
OP2: (60.518,119.027,87.853)
C3': (57.130,122.202,89.275)
C1': (56.403,121.666,87.072)
C5': (59.508,121.431,88.860)
O6: (53.041,117.599,84.263)
O4': (57.758,121.339,87.226)
C8: (55.730,119.216,87.170)
C2: (53.672,121.064,83.790)
C6: (53.527,118.712,84.473)
C5: (54.416,119.102,85.502)
C4: (54.823,120.413,85.565)
P: (59.716,118.825,89.086)
C4': (58.295,122.123,88.307)
C2': (55.936,122.387,88.342)
O2': (55.762,123.736,87.997)
N1: (53.206,119.780,83.641)
N2: (53.259,121.963,82.884)
N3: (54.489,121.441,84.755)
N7: (54.994,118.357,86.520)
N9: (55.679,120.478,86.635)
O5': (59.109,120.224,89.513)
O3': (57.330,123.350,90.095)
Image (generated by PyMOL):