Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0622:02378
Extra
PDB:
ATOM 1 O3' C A 621 52.181 121.397 87.756 1.00 35.92 O
ATOM 2 P G A 622 51.554 122.866 87.694 1.00 37.48 P
ATOM 3 OP1 G A 622 52.575 123.766 87.105 1.00 37.87 O
ATOM 4 OP2 G A 622 50.996 123.171 89.026 1.00 37.44 O
ATOM 5 O5' G A 622 50.348 122.702 86.669 1.00 36.60 O
ATOM 6 C5' G A 622 50.592 122.335 85.297 1.00 37.63 C
ATOM 7 C4' G A 622 49.347 122.545 84.472 1.00 37.84 C
ATOM 8 O4' G A 622 48.419 121.450 84.662 1.00 38.86 O
ATOM 9 C3' G A 622 48.546 123.785 84.819 1.00 37.12 C
ATOM 10 O3' G A 622 49.097 124.934 84.196 1.00 37.60 O
ATOM 11 C2' G A 622 47.169 123.427 84.286 1.00 38.43 C
ATOM 12 O2' G A 622 47.129 123.521 82.880 1.00 39.92 O
ATOM 13 C1' G A 622 47.085 121.947 84.657 1.00 39.41 C
ATOM 14 N9 G A 622 46.510 121.702 85.978 1.00 40.61 N
ATOM 15 C8 G A 622 47.166 121.818 87.179 1.00 42.50 C
ATOM 16 N7 G A 622 46.425 121.509 88.204 1.00 42.80 N
ATOM 17 C5 G A 622 45.198 121.173 87.654 1.00 43.36 C
ATOM 18 C6 G A 622 44.008 120.748 88.284 1.00 44.16 C
ATOM 19 O6 G A 622 43.800 120.582 89.491 1.00 47.24 O
ATOM 20 N1 G A 622 42.994 120.509 87.361 1.00 41.73 N
ATOM 21 C2 G A 622 43.113 120.665 86.011 1.00 39.98 C
ATOM 22 N2 G A 622 42.025 120.391 85.309 1.00 39.46 N
ATOM 23 N3 G A 622 44.221 121.061 85.401 1.00 41.32 N
ATOM 24 C4 G A 622 45.224 121.295 86.281 1.00 42.14 C
ATOM 25 P A A 623 48.808 126.385 84.810 1.00 39.13 P
ATOM 26 OP1 A A 623 49.685 127.373 84.130 1.00 37.89 O
ATOM 27 OP2 A A 623 48.814 126.293 86.293 1.00 37.46 O
ATOM 28 O5' A A 623 47.318 126.681 84.357 1.00 38.23 O
TER
ATOM 1 O3' C B2377 60.237 118.418 90.182 1.00 39.96 O
ATOM 2 P G B2378 59.476 118.551 88.781 1.00 40.19 P
ATOM 3 OP1 G B2378 58.471 117.467 88.705 1.00 41.55 O
ATOM 4 OP2 G B2378 60.482 118.695 87.708 1.00 38.86 O
ATOM 5 O5' G B2378 58.668 119.910 88.923 1.00 40.06 O
ATOM 6 C5' G B2378 59.182 121.145 88.421 1.00 40.40 C
ATOM 7 C4' G B2378 58.044 121.979 87.906 1.00 43.18 C
ATOM 8 O4' G B2378 57.463 121.312 86.768 1.00 42.62 O
ATOM 9 C3' G B2378 56.879 122.112 88.875 1.00 44.70 C
ATOM 10 O3' G B2378 57.151 123.196 89.766 1.00 48.89 O
ATOM 11 C2' G B2378 55.698 122.412 87.950 1.00 43.85 C
ATOM 12 O2' G B2378 55.584 123.787 87.643 1.00 44.20 O
ATOM 13 C1' G B2378 56.103 121.669 86.671 1.00 44.40 C
ATOM 14 N9 G B2378 55.346 120.494 86.254 1.00 45.62 N
ATOM 15 C8 G B2378 55.361 119.242 86.820 1.00 45.66 C
ATOM 16 N7 G B2378 54.642 118.373 86.160 1.00 45.85 N
ATOM 17 C5 G B2378 54.103 119.100 85.106 1.00 45.93 C
ATOM 18 C6 G B2378 53.256 118.691 84.046 1.00 45.09 C
ATOM 19 O6 G B2378 52.790 117.570 83.824 1.00 44.46 O
ATOM 20 N1 G B2378 52.959 119.748 83.191 1.00 45.12 N
ATOM 21 C2 G B2378 53.410 121.036 83.338 1.00 44.61 C
ATOM 22 N2 G B2378 53.007 121.916 82.415 1.00 43.82 N
ATOM 23 N3 G B2378 54.198 121.431 84.319 1.00 45.23 N
ATOM 24 C4 G B2378 54.508 120.416 85.161 1.00 46.07 C
ATOM 25 P A B2379 56.692 123.123 91.306 1.00 50.58 P
ATOM 26 OP1 A B2379 55.292 122.635 91.369 1.00 52.88 O
ATOM 27 OP2 A B2379 57.034 124.440 91.893 1.00 51.66 O
ATOM 28 O5' A B2379 57.609 122.000 91.964 1.00 49.49 O
TER
ATOM 2 P G A 622 51.554 122.866 87.694 1.00 37.48 P
ATOM 3 OP1 G A 622 52.575 123.766 87.105 1.00 37.87 O
ATOM 4 OP2 G A 622 50.996 123.171 89.026 1.00 37.44 O
ATOM 5 O5' G A 622 50.348 122.702 86.669 1.00 36.60 O
ATOM 6 C5' G A 622 50.592 122.335 85.297 1.00 37.63 C
ATOM 7 C4' G A 622 49.347 122.545 84.472 1.00 37.84 C
ATOM 8 O4' G A 622 48.419 121.450 84.662 1.00 38.86 O
ATOM 9 C3' G A 622 48.546 123.785 84.819 1.00 37.12 C
ATOM 10 O3' G A 622 49.097 124.934 84.196 1.00 37.60 O
ATOM 11 C2' G A 622 47.169 123.427 84.286 1.00 38.43 C
ATOM 12 O2' G A 622 47.129 123.521 82.880 1.00 39.92 O
ATOM 13 C1' G A 622 47.085 121.947 84.657 1.00 39.41 C
ATOM 14 N9 G A 622 46.510 121.702 85.978 1.00 40.61 N
ATOM 15 C8 G A 622 47.166 121.818 87.179 1.00 42.50 C
ATOM 16 N7 G A 622 46.425 121.509 88.204 1.00 42.80 N
ATOM 17 C5 G A 622 45.198 121.173 87.654 1.00 43.36 C
ATOM 18 C6 G A 622 44.008 120.748 88.284 1.00 44.16 C
ATOM 19 O6 G A 622 43.800 120.582 89.491 1.00 47.24 O
ATOM 20 N1 G A 622 42.994 120.509 87.361 1.00 41.73 N
ATOM 21 C2 G A 622 43.113 120.665 86.011 1.00 39.98 C
ATOM 22 N2 G A 622 42.025 120.391 85.309 1.00 39.46 N
ATOM 23 N3 G A 622 44.221 121.061 85.401 1.00 41.32 N
ATOM 24 C4 G A 622 45.224 121.295 86.281 1.00 42.14 C
ATOM 25 P A A 623 48.808 126.385 84.810 1.00 39.13 P
ATOM 26 OP1 A A 623 49.685 127.373 84.130 1.00 37.89 O
ATOM 27 OP2 A A 623 48.814 126.293 86.293 1.00 37.46 O
ATOM 28 O5' A A 623 47.318 126.681 84.357 1.00 38.23 O
TER
ATOM 1 O3' C B2377 60.237 118.418 90.182 1.00 39.96 O
ATOM 2 P G B2378 59.476 118.551 88.781 1.00 40.19 P
ATOM 3 OP1 G B2378 58.471 117.467 88.705 1.00 41.55 O
ATOM 4 OP2 G B2378 60.482 118.695 87.708 1.00 38.86 O
ATOM 5 O5' G B2378 58.668 119.910 88.923 1.00 40.06 O
ATOM 6 C5' G B2378 59.182 121.145 88.421 1.00 40.40 C
ATOM 7 C4' G B2378 58.044 121.979 87.906 1.00 43.18 C
ATOM 8 O4' G B2378 57.463 121.312 86.768 1.00 42.62 O
ATOM 9 C3' G B2378 56.879 122.112 88.875 1.00 44.70 C
ATOM 10 O3' G B2378 57.151 123.196 89.766 1.00 48.89 O
ATOM 11 C2' G B2378 55.698 122.412 87.950 1.00 43.85 C
ATOM 12 O2' G B2378 55.584 123.787 87.643 1.00 44.20 O
ATOM 13 C1' G B2378 56.103 121.669 86.671 1.00 44.40 C
ATOM 14 N9 G B2378 55.346 120.494 86.254 1.00 45.62 N
ATOM 15 C8 G B2378 55.361 119.242 86.820 1.00 45.66 C
ATOM 16 N7 G B2378 54.642 118.373 86.160 1.00 45.85 N
ATOM 17 C5 G B2378 54.103 119.100 85.106 1.00 45.93 C
ATOM 18 C6 G B2378 53.256 118.691 84.046 1.00 45.09 C
ATOM 19 O6 G B2378 52.790 117.570 83.824 1.00 44.46 O
ATOM 20 N1 G B2378 52.959 119.748 83.191 1.00 45.12 N
ATOM 21 C2 G B2378 53.410 121.036 83.338 1.00 44.61 C
ATOM 22 N2 G B2378 53.007 121.916 82.415 1.00 43.82 N
ATOM 23 N3 G B2378 54.198 121.431 84.319 1.00 45.23 N
ATOM 24 C4 G B2378 54.508 120.416 85.161 1.00 46.07 C
ATOM 25 P A B2379 56.692 123.123 91.306 1.00 50.58 P
ATOM 26 OP1 A B2379 55.292 122.635 91.369 1.00 52.88 O
ATOM 27 OP2 A B2379 57.034 124.440 91.893 1.00 51.66 O
ATOM 28 O5' A B2379 57.609 122.000 91.964 1.00 49.49 O
TER
Atoms:
OP1: (52.575,123.766,87.105)
OP2: (50.996,123.171,89.026)
C3': (48.546,123.785,84.819)
C1': (47.085,121.947,84.657)
C5': (50.592,122.335,85.297)
O6: (43.800,120.582,89.491)
O4': (48.419,121.450,84.662)
C8: (47.166,121.818,87.179)
C2: (43.113,120.665,86.011)
C6: (44.008,120.748,88.284)
C5: (45.198,121.173,87.654)
C4: (45.224,121.295,86.281)
P: (51.554,122.866,87.694)
C4': (49.347,122.545,84.472)
C2': (47.169,123.427,84.286)
O2': (47.129,123.521,82.880)
N1: (42.994,120.509,87.361)
N2: (42.025,120.391,85.309)
N3: (44.221,121.061,85.401)
N7: (46.425,121.509,88.204)
N9: (46.510,121.702,85.978)
O5': (50.348,122.702,86.669)
O3': (49.097,124.934,84.196)
OP2: (50.996,123.171,89.026)
C3': (48.546,123.785,84.819)
C1': (47.085,121.947,84.657)
C5': (50.592,122.335,85.297)
O6: (43.800,120.582,89.491)
O4': (48.419,121.450,84.662)
C8: (47.166,121.818,87.179)
C2: (43.113,120.665,86.011)
C6: (44.008,120.748,88.284)
C5: (45.198,121.173,87.654)
C4: (45.224,121.295,86.281)
P: (51.554,122.866,87.694)
C4': (49.347,122.545,84.472)
C2': (47.169,123.427,84.286)
O2': (47.129,123.521,82.880)
N1: (42.994,120.509,87.361)
N2: (42.025,120.391,85.309)
N3: (44.221,121.061,85.401)
N7: (46.425,121.509,88.204)
N9: (46.510,121.702,85.978)
O5': (50.348,122.702,86.669)
O3': (49.097,124.934,84.196)
OP1: (58.471,117.467,88.705)
OP2: (60.482,118.695,87.708)
C3': (56.879,122.112,88.875)
C1': (56.103,121.669,86.671)
C5': (59.182,121.145,88.421)
O6: (52.790,117.570,83.824)
O4': (57.463,121.312,86.768)
C8: (55.361,119.242,86.820)
C2: (53.410,121.036,83.338)
C6: (53.256,118.691,84.046)
C5: (54.103,119.100,85.106)
C4: (54.508,120.416,85.161)
P: (59.476,118.551,88.781)
C4': (58.044,121.979,87.906)
C2': (55.698,122.412,87.950)
O2': (55.584,123.787,87.643)
N1: (52.959,119.748,83.191)
N2: (53.007,121.916,82.415)
N3: (54.198,121.431,84.319)
N7: (54.642,118.373,86.160)
N9: (55.346,120.494,86.254)
O5': (58.668,119.910,88.923)
O3': (57.151,123.196,89.766)
OP2: (60.482,118.695,87.708)
C3': (56.879,122.112,88.875)
C1': (56.103,121.669,86.671)
C5': (59.182,121.145,88.421)
O6: (52.790,117.570,83.824)
O4': (57.463,121.312,86.768)
C8: (55.361,119.242,86.820)
C2: (53.410,121.036,83.338)
C6: (53.256,118.691,84.046)
C5: (54.103,119.100,85.106)
C4: (54.508,120.416,85.161)
P: (59.476,118.551,88.781)
C4': (58.044,121.979,87.906)
C2': (55.698,122.412,87.950)
O2': (55.584,123.787,87.643)
N1: (52.959,119.748,83.191)
N2: (53.007,121.916,82.415)
N3: (54.198,121.431,84.319)
N7: (54.642,118.373,86.160)
N9: (55.346,120.494,86.254)
O5': (58.668,119.910,88.923)
O3': (57.151,123.196,89.766)
Image (generated by PyMOL):