ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:5601:52624

Extra

PDB:
ATOM 1 O3' C A 600 131.525 4.370 229.030 1.00 35.01 O
ATOM 2 P G A 601 130.936 5.661 228.339 1.00 38.82 P
ATOM 3 OP1 G A 601 131.892 6.064 227.279 1.00 38.87 O
ATOM 4 OP2 G A 601 130.618 6.638 229.412 1.00 38.68 O
ATOM 5 O5' G A 601 129.609 5.088 227.697 1.00 39.05 O
ATOM 6 C5' G A 601 129.654 4.072 226.705 1.00 39.21 C
ATOM 7 C4' G A 601 128.268 3.734 226.244 1.00 39.43 C
ATOM 8 O4' G A 601 127.594 2.981 227.293 1.00 39.38 O
ATOM 9 C3' G A 601 127.344 4.922 225.993 1.00 39.52 C
ATOM 10 O3' G A 601 127.509 5.485 224.694 1.00 39.69 O
ATOM 11 C2' G A 601 125.981 4.306 226.213 1.00 39.66 C
ATOM 12 O2' G A 601 125.664 3.486 225.107 1.00 39.89 O
ATOM 13 C1' G A 601 126.258 3.374 227.393 1.00 39.49 C
ATOM 14 N9 G A 601 126.060 4.002 228.729 1.00 39.31 N
ATOM 15 C8 G A 601 127.036 4.575 229.493 1.00 39.08 C
ATOM 16 N7 G A 601 126.634 5.021 230.643 1.00 38.97 N
ATOM 17 C5 G A 601 125.308 4.694 230.681 1.00 39.13 C
ATOM 18 C6 G A 601 124.357 4.927 231.694 1.00 39.11 C
ATOM 19 O6 G A 601 124.491 5.474 232.784 1.00 38.96 O
ATOM 20 N1 G A 601 123.113 4.455 231.327 1.00 39.32 N
ATOM 21 C2 G A 601 122.835 3.833 230.144 1.00 39.52 C
ATOM 22 N2 G A 601 121.571 3.433 229.953 1.00 39.72 N
ATOM 23 N3 G A 601 123.725 3.616 229.200 1.00 39.54 N
ATOM 24 C4 G A 601 124.942 4.059 229.527 1.00 39.33 C
ATOM 25 P G A 602 127.328 7.078 224.442 1.00 35.33 P
ATOM 26 OP1 G A 602 127.643 7.337 223.016 1.00 35.52 O
ATOM 27 OP2 G A 602 128.089 7.791 225.489 1.00 35.08 O
ATOM 28 O5' G A 602 125.798 7.323 224.731 1.00 35.45 O
TER

ATOM 1 O3' C B2623 140.120 1.091 231.183 1.00 54.80 O
ATOM 2 P G B2624 138.910 0.490 230.254 1.00104.48 P
ATOM 3 OP1 G B2624 137.646 0.581 231.043 1.00104.45 O
ATOM 4 OP2 G B2624 139.349 -0.858 229.741 1.00104.60 O
ATOM 5 O5' G B2624 138.866 1.516 229.040 1.00104.59 O
ATOM 6 C5' G B2624 138.506 2.871 229.236 1.00104.53 C
ATOM 7 C4' G B2624 137.554 3.361 228.164 1.00104.71 C
ATOM 8 O4' G B2624 136.837 2.251 227.565 1.00104.88 O
ATOM 9 C3' G B2624 136.481 4.319 228.641 1.00104.68 C
ATOM 10 O3' G B2624 136.955 5.651 228.646 1.00104.61 O
ATOM 11 C2' G B2624 135.285 4.074 227.690 1.00104.90 C
ATOM 12 O2' G B2624 135.302 4.992 226.600 1.00105.03 O
ATOM 13 C1' G B2624 135.553 2.659 227.145 1.00105.01 C
ATOM 14 N9 G B2624 134.563 1.635 227.575 1.00105.07 N
ATOM 15 C8 G B2624 134.651 0.837 228.699 1.00104.94 C
ATOM 16 N7 G B2624 133.698 -0.044 228.833 1.00105.05 N
ATOM 17 C5 G B2624 132.922 0.159 227.694 1.00105.25 C
ATOM 18 C6 G B2624 131.728 -0.508 227.276 1.00105.45 C
ATOM 19 O6 G B2624 131.117 -1.423 227.843 1.00105.48 O
ATOM 20 N1 G B2624 131.238 -0.019 226.066 1.00105.64 N
ATOM 21 C2 G B2624 131.818 0.996 225.343 1.00105.65 C
ATOM 22 N2 G B2624 131.169 1.313 224.205 1.00105.87 N
ATOM 23 N3 G B2624 132.939 1.627 225.719 1.00105.47 N
ATOM 24 C4 G B2624 133.444 1.172 226.899 1.00105.27 C
ATOM 25 P A B2625 136.281 6.753 229.576 1.00126.37 P
ATOM 26 OP1 A B2625 136.150 6.162 230.929 1.00126.22 O
ATOM 27 OP2 A B2625 135.046 7.226 228.874 1.00126.54 O
ATOM 28 O5' A B2625 137.367 7.911 229.581 1.00126.28 O
TER

Atoms:
OP1: (131.892,6.064,227.279)
OP2: (130.618,6.638,229.412)
C3': (127.344,4.922,225.993)
C1': (126.258,3.374,227.393)
C5': (129.654,4.072,226.705)
O6: (124.491,5.474,232.784)
O4': (127.594,2.981,227.293)
C8: (127.036,4.575,229.493)
C2: (122.835,3.833,230.144)
C6: (124.357,4.927,231.694)
C5: (125.308,4.694,230.681)
C4: (124.942,4.059,229.527)
P: (130.936,5.661,228.339)
C4': (128.268,3.734,226.244)
C2': (125.981,4.306,226.213)
O2': (125.664,3.486,225.107)
N1: (123.113,4.455,231.327)
N2: (121.571,3.433,229.953)
N3: (123.725,3.616,229.200)
N7: (126.634,5.021,230.643)
N9: (126.060,4.002,228.729)
O5': (129.609,5.088,227.697)
O3': (127.509,5.485,224.694)
OP1: (137.646,0.581,231.043)
OP2: (139.349,-0.858,229.741)
C3': (136.481,4.319,228.641)
C1': (135.553,2.659,227.145)
C5': (138.506,2.871,229.236)
O6: (131.117,-1.423,227.843)
O4': (136.837,2.251,227.565)
C8: (134.651,0.837,228.699)
C2: (131.818,0.996,225.343)
C6: (131.728,-0.508,227.276)
C5: (132.922,0.159,227.694)
C4: (133.444,1.172,226.899)
P: (138.910,0.490,230.254)
C4': (137.554,3.361,228.164)
C2': (135.285,4.074,227.690)
O2': (135.302,4.992,226.600)
N1: (131.238,-0.019,226.066)
N2: (131.169,1.313,224.205)
N3: (132.939,1.627,225.719)
N7: (133.698,-0.044,228.833)
N9: (134.563,1.635,227.575)
O5': (138.866,1.516,229.040)
O3': (136.955,5.651,228.646)
Image (generated by PyMOL):
PyMOL image
show in jmol