Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0260:0357
Extra
PDB:
ATOM 1 O3' C A 259 74.790 97.503 7.178 1.00 79.33 O
ATOM 2 P A A 260 73.309 98.121 7.079 1.00 82.79 P
ATOM 3 OP1 A A 260 73.379 99.520 6.581 1.00 82.92 O
ATOM 4 OP2 A A 260 72.616 97.836 8.364 1.00 84.19 O
ATOM 5 O5' A A 260 72.638 97.226 5.948 1.00 83.81 O
ATOM 6 C5' A A 260 73.446 96.680 4.891 1.00 86.97 C
ATOM 7 C4' A A 260 72.578 96.184 3.767 1.00 88.29 C
ATOM 8 O4' A A 260 71.631 97.222 3.428 1.00 90.07 O
ATOM 9 C3' A A 260 73.318 95.925 2.463 1.00 87.99 C
ATOM 10 O3' A A 260 73.874 94.605 2.425 1.00 83.67 O
ATOM 11 C2' A A 260 72.200 96.051 1.422 1.00 91.10 C
ATOM 12 O2' A A 260 71.465 94.854 1.232 1.00 92.62 O
ATOM 13 C1' A A 260 71.270 97.085 2.071 1.00 92.51 C
ATOM 14 N9 A A 260 71.214 98.411 1.461 1.00 94.86 N
ATOM 15 C8 A A 260 72.000 99.510 1.711 1.00 96.31 C
ATOM 16 N7 A A 260 71.662 100.570 1.018 1.00 97.61 N
ATOM 17 C5 A A 260 70.587 100.138 0.252 1.00 98.00 C
ATOM 18 C6 A A 260 69.772 100.790 -0.694 1.00 99.32 C
ATOM 19 N6 A A 260 69.916 102.075 -1.040 1.00 99.43 N
ATOM 20 N1 A A 260 68.790 100.067 -1.280 1.00 99.68 N
ATOM 21 C2 A A 260 68.642 98.781 -0.929 1.00 99.01 C
ATOM 22 N3 A A 260 69.340 98.061 -0.052 1.00 97.29 N
ATOM 23 C4 A A 260 70.307 98.807 0.510 1.00 96.75 C
ATOM 24 P G A 261 75.330 94.308 3.048 1.00 80.89 P
ATOM 25 OP1 G A 261 75.736 92.938 2.634 1.00 80.57 O
ATOM 26 OP2 G A 261 75.309 94.653 4.492 1.00 82.20 O
ATOM 27 O5' G A 261 76.312 95.328 2.325 1.00 77.65 O
TER
ATOM 1 O3' C B 356 71.480 102.501 -3.359 1.00104.00 O
ATOM 2 P G B 357 72.751 101.520 -3.283 1.00104.13 P
ATOM 3 OP1 G B 357 73.012 101.237 -1.845 1.00103.13 O
ATOM 4 OP2 G B 357 73.839 102.078 -4.130 1.00103.57 O
ATOM 5 O5' G B 357 72.230 100.182 -3.975 1.00105.61 O
ATOM 6 C5' G B 357 71.029 99.536 -3.512 1.00107.39 C
ATOM 7 C4' G B 357 70.572 98.494 -4.505 1.00108.31 C
ATOM 8 O4' G B 357 70.273 99.134 -5.775 1.00108.27 O
ATOM 9 C3' G B 357 71.588 97.426 -4.872 1.00108.86 C
ATOM 10 O3' G B 357 71.671 96.392 -3.897 1.00109.95 O
ATOM 11 C2' G B 357 71.048 96.933 -6.206 1.00108.76 C
ATOM 12 O2' G B 357 69.938 96.068 -6.061 1.00109.25 O
ATOM 13 C1' G B 357 70.591 98.249 -6.840 1.00108.24 C
ATOM 14 N9 G B 357 71.647 98.852 -7.650 1.00107.87 N
ATOM 15 C8 G B 357 72.364 99.994 -7.382 1.00107.40 C
ATOM 16 N7 G B 357 73.269 100.255 -8.285 1.00107.05 N
ATOM 17 C5 G B 357 73.139 99.227 -9.209 1.00107.21 C
ATOM 18 C6 G B 357 73.861 98.964 -10.404 1.00106.93 C
ATOM 19 O6 G B 357 74.794 99.608 -10.900 1.00106.18 O
ATOM 20 N1 G B 357 73.401 97.813 -11.036 1.00107.27 N
ATOM 21 C2 G B 357 72.381 97.013 -10.578 1.00107.32 C
ATOM 22 N2 G B 357 72.082 95.939 -11.325 1.00106.76 N
ATOM 23 N3 G B 357 71.704 97.246 -9.467 1.00107.45 N
ATOM 24 C4 G B 357 72.134 98.360 -8.837 1.00107.62 C
ATOM 25 P G B 358 73.013 95.509 -3.787 1.00110.50 P
ATOM 26 OP1 G B 358 72.834 94.562 -2.652 1.00109.90 O
ATOM 27 OP2 G B 358 74.186 96.423 -3.805 1.00110.40 O
ATOM 28 O5' G B 358 73.034 94.673 -5.142 1.00109.55 O
TER
ATOM 2 P A A 260 73.309 98.121 7.079 1.00 82.79 P
ATOM 3 OP1 A A 260 73.379 99.520 6.581 1.00 82.92 O
ATOM 4 OP2 A A 260 72.616 97.836 8.364 1.00 84.19 O
ATOM 5 O5' A A 260 72.638 97.226 5.948 1.00 83.81 O
ATOM 6 C5' A A 260 73.446 96.680 4.891 1.00 86.97 C
ATOM 7 C4' A A 260 72.578 96.184 3.767 1.00 88.29 C
ATOM 8 O4' A A 260 71.631 97.222 3.428 1.00 90.07 O
ATOM 9 C3' A A 260 73.318 95.925 2.463 1.00 87.99 C
ATOM 10 O3' A A 260 73.874 94.605 2.425 1.00 83.67 O
ATOM 11 C2' A A 260 72.200 96.051 1.422 1.00 91.10 C
ATOM 12 O2' A A 260 71.465 94.854 1.232 1.00 92.62 O
ATOM 13 C1' A A 260 71.270 97.085 2.071 1.00 92.51 C
ATOM 14 N9 A A 260 71.214 98.411 1.461 1.00 94.86 N
ATOM 15 C8 A A 260 72.000 99.510 1.711 1.00 96.31 C
ATOM 16 N7 A A 260 71.662 100.570 1.018 1.00 97.61 N
ATOM 17 C5 A A 260 70.587 100.138 0.252 1.00 98.00 C
ATOM 18 C6 A A 260 69.772 100.790 -0.694 1.00 99.32 C
ATOM 19 N6 A A 260 69.916 102.075 -1.040 1.00 99.43 N
ATOM 20 N1 A A 260 68.790 100.067 -1.280 1.00 99.68 N
ATOM 21 C2 A A 260 68.642 98.781 -0.929 1.00 99.01 C
ATOM 22 N3 A A 260 69.340 98.061 -0.052 1.00 97.29 N
ATOM 23 C4 A A 260 70.307 98.807 0.510 1.00 96.75 C
ATOM 24 P G A 261 75.330 94.308 3.048 1.00 80.89 P
ATOM 25 OP1 G A 261 75.736 92.938 2.634 1.00 80.57 O
ATOM 26 OP2 G A 261 75.309 94.653 4.492 1.00 82.20 O
ATOM 27 O5' G A 261 76.312 95.328 2.325 1.00 77.65 O
TER
ATOM 1 O3' C B 356 71.480 102.501 -3.359 1.00104.00 O
ATOM 2 P G B 357 72.751 101.520 -3.283 1.00104.13 P
ATOM 3 OP1 G B 357 73.012 101.237 -1.845 1.00103.13 O
ATOM 4 OP2 G B 357 73.839 102.078 -4.130 1.00103.57 O
ATOM 5 O5' G B 357 72.230 100.182 -3.975 1.00105.61 O
ATOM 6 C5' G B 357 71.029 99.536 -3.512 1.00107.39 C
ATOM 7 C4' G B 357 70.572 98.494 -4.505 1.00108.31 C
ATOM 8 O4' G B 357 70.273 99.134 -5.775 1.00108.27 O
ATOM 9 C3' G B 357 71.588 97.426 -4.872 1.00108.86 C
ATOM 10 O3' G B 357 71.671 96.392 -3.897 1.00109.95 O
ATOM 11 C2' G B 357 71.048 96.933 -6.206 1.00108.76 C
ATOM 12 O2' G B 357 69.938 96.068 -6.061 1.00109.25 O
ATOM 13 C1' G B 357 70.591 98.249 -6.840 1.00108.24 C
ATOM 14 N9 G B 357 71.647 98.852 -7.650 1.00107.87 N
ATOM 15 C8 G B 357 72.364 99.994 -7.382 1.00107.40 C
ATOM 16 N7 G B 357 73.269 100.255 -8.285 1.00107.05 N
ATOM 17 C5 G B 357 73.139 99.227 -9.209 1.00107.21 C
ATOM 18 C6 G B 357 73.861 98.964 -10.404 1.00106.93 C
ATOM 19 O6 G B 357 74.794 99.608 -10.900 1.00106.18 O
ATOM 20 N1 G B 357 73.401 97.813 -11.036 1.00107.27 N
ATOM 21 C2 G B 357 72.381 97.013 -10.578 1.00107.32 C
ATOM 22 N2 G B 357 72.082 95.939 -11.325 1.00106.76 N
ATOM 23 N3 G B 357 71.704 97.246 -9.467 1.00107.45 N
ATOM 24 C4 G B 357 72.134 98.360 -8.837 1.00107.62 C
ATOM 25 P G B 358 73.013 95.509 -3.787 1.00110.50 P
ATOM 26 OP1 G B 358 72.834 94.562 -2.652 1.00109.90 O
ATOM 27 OP2 G B 358 74.186 96.423 -3.805 1.00110.40 O
ATOM 28 O5' G B 358 73.034 94.673 -5.142 1.00109.55 O
TER
Atoms:
OP1: (73.379,99.520,6.581)
OP2: (72.616,97.836,8.364)
C3': (73.318,95.925,2.463)
C1': (71.270,97.085,2.071)
C5': (73.446,96.680,4.891)
O4': (71.631,97.222,3.428)
C8: (72.000,99.510,1.711)
O2': (71.465,94.854,1.232)
C6: (69.772,100.790,-0.694)
C5: (70.587,100.138,0.252)
C4: (70.307,98.807,0.510)
P: (73.309,98.121,7.079)
C4': (72.578,96.184,3.767)
C2': (72.200,96.051,1.422)
C2: (68.642,98.781,-0.929)
N1: (68.790,100.067,-1.280)
N3: (69.340,98.061,-0.052)
N6: (69.916,102.075,-1.040)
N7: (71.662,100.570,1.018)
N9: (71.214,98.411,1.461)
O5': (72.638,97.226,5.948)
O3': (73.874,94.605,2.425)
OP2: (72.616,97.836,8.364)
C3': (73.318,95.925,2.463)
C1': (71.270,97.085,2.071)
C5': (73.446,96.680,4.891)
O4': (71.631,97.222,3.428)
C8: (72.000,99.510,1.711)
O2': (71.465,94.854,1.232)
C6: (69.772,100.790,-0.694)
C5: (70.587,100.138,0.252)
C4: (70.307,98.807,0.510)
P: (73.309,98.121,7.079)
C4': (72.578,96.184,3.767)
C2': (72.200,96.051,1.422)
C2: (68.642,98.781,-0.929)
N1: (68.790,100.067,-1.280)
N3: (69.340,98.061,-0.052)
N6: (69.916,102.075,-1.040)
N7: (71.662,100.570,1.018)
N9: (71.214,98.411,1.461)
O5': (72.638,97.226,5.948)
O3': (73.874,94.605,2.425)
OP1: (73.012,101.237,-1.845)
OP2: (73.839,102.078,-4.130)
C3': (71.588,97.426,-4.872)
C1': (70.591,98.249,-6.840)
C5': (71.029,99.536,-3.512)
O6: (74.794,99.608,-10.900)
O4': (70.273,99.134,-5.775)
C8: (72.364,99.994,-7.382)
C2: (72.381,97.013,-10.578)
C6: (73.861,98.964,-10.404)
C5: (73.139,99.227,-9.209)
C4: (72.134,98.360,-8.837)
P: (72.751,101.520,-3.283)
C4': (70.572,98.494,-4.505)
C2': (71.048,96.933,-6.206)
O2': (69.938,96.068,-6.061)
N1: (73.401,97.813,-11.036)
N2: (72.082,95.939,-11.325)
N3: (71.704,97.246,-9.467)
N7: (73.269,100.255,-8.285)
N9: (71.647,98.852,-7.650)
O5': (72.230,100.182,-3.975)
O3': (71.671,96.392,-3.897)
OP2: (73.839,102.078,-4.130)
C3': (71.588,97.426,-4.872)
C1': (70.591,98.249,-6.840)
C5': (71.029,99.536,-3.512)
O6: (74.794,99.608,-10.900)
O4': (70.273,99.134,-5.775)
C8: (72.364,99.994,-7.382)
C2: (72.381,97.013,-10.578)
C6: (73.861,98.964,-10.404)
C5: (73.139,99.227,-9.209)
C4: (72.134,98.360,-8.837)
P: (72.751,101.520,-3.283)
C4': (70.572,98.494,-4.505)
C2': (71.048,96.933,-6.206)
O2': (69.938,96.068,-6.061)
N1: (73.401,97.813,-11.036)
N2: (72.082,95.939,-11.325)
N3: (71.704,97.246,-9.467)
N7: (73.269,100.255,-8.285)
N9: (71.647,98.852,-7.650)
O5': (72.230,100.182,-3.975)
O3': (71.671,96.392,-3.897)
Image (generated by PyMOL):