Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0260:0357
Extra
PDB:
ATOM 1 O3' C A 259 75.152 97.471 7.344 1.00 92.94 O
ATOM 2 P A A 260 73.664 98.094 7.315 1.00 95.44 P
ATOM 3 OP1 A A 260 73.720 99.536 6.952 1.00 95.13 O
ATOM 4 OP2 A A 260 72.973 97.678 8.563 1.00 96.53 O
ATOM 5 O5' A A 260 72.982 97.313 6.111 1.00 96.49 O
ATOM 6 C5' A A 260 73.779 96.867 5.008 1.00 98.60 C
ATOM 7 C4' A A 260 72.917 96.210 3.969 1.00 99.77 C
ATOM 8 O4' A A 260 71.846 97.117 3.616 1.00101.10 O
ATOM 9 C3' A A 260 73.645 95.924 2.664 1.00 99.95 C
ATOM 10 O3' A A 260 74.285 94.635 2.690 1.00 97.39 O
ATOM 11 C2' A A 260 72.504 95.943 1.642 1.00102.15 C
ATOM 12 O2' A A 260 71.804 94.716 1.549 1.00103.10 O
ATOM 13 C1' A A 260 71.552 96.986 2.241 1.00103.12 C
ATOM 14 N9 A A 260 71.551 98.316 1.633 1.00105.33 N
ATOM 15 C8 A A 260 72.376 99.384 1.895 1.00106.45 C
ATOM 16 N7 A A 260 72.083 100.460 1.203 1.00107.52 N
ATOM 17 C5 A A 260 70.999 100.072 0.426 1.00108.23 C
ATOM 18 C6 A A 260 70.213 100.761 -0.530 1.00109.55 C
ATOM 19 N6 A A 260 70.405 102.043 -0.873 1.00109.13 N
ATOM 20 N1 A A 260 69.208 100.076 -1.126 1.00109.84 N
ATOM 21 C2 A A 260 69.012 98.793 -0.780 1.00108.92 C
ATOM 22 N3 A A 260 69.677 98.043 0.100 1.00107.69 N
ATOM 23 C4 A A 260 70.667 98.750 0.674 1.00106.95 C
ATOM 24 P G A 261 75.731 94.439 3.388 1.00 94.96 P
ATOM 25 OP1 G A 261 76.123 93.006 3.233 1.00 94.51 O
ATOM 26 OP2 G A 261 75.704 95.038 4.744 1.00 94.70 O
ATOM 27 O5' G A 261 76.741 95.295 2.506 1.00 91.41 O
TER
ATOM 1 O3' C B 356 71.842 102.635 -3.327 1.00117.98 O
ATOM 2 P G B 357 73.107 101.638 -3.337 1.00118.08 P
ATOM 3 OP1 G B 357 73.477 101.374 -1.921 1.00116.98 O
ATOM 4 OP2 G B 357 74.134 102.177 -4.274 1.00116.73 O
ATOM 5 O5' G B 357 72.521 100.291 -3.965 1.00118.80 O
ATOM 6 C5' G B 357 71.307 99.694 -3.449 1.00119.23 C
ATOM 7 C4' G B 357 70.783 98.636 -4.399 1.00119.91 C
ATOM 8 O4' G B 357 70.456 99.247 -5.678 1.00119.95 O
ATOM 9 C3' G B 357 71.749 97.521 -4.770 1.00120.28 C
ATOM 10 O3' G B 357 71.833 96.499 -3.781 1.00120.98 O
ATOM 11 C2' G B 357 71.158 97.015 -6.076 1.00120.06 C
ATOM 12 O2' G B 357 70.027 96.190 -5.876 1.00119.62 O
ATOM 13 C1' G B 357 70.732 98.331 -6.732 1.00120.32 C
ATOM 14 N9 G B 357 71.788 98.892 -7.575 1.00120.53 N
ATOM 15 C8 G B 357 72.513 100.042 -7.352 1.00120.38 C
ATOM 16 N7 G B 357 73.413 100.269 -8.270 1.00120.39 N
ATOM 17 C5 G B 357 73.276 99.209 -9.159 1.00120.67 C
ATOM 18 C6 G B 357 73.994 98.905 -10.352 1.00120.31 C
ATOM 19 O6 G B 357 74.925 99.530 -10.876 1.00119.61 O
ATOM 20 N1 G B 357 73.529 97.733 -10.943 1.00120.28 N
ATOM 21 C2 G B 357 72.512 96.948 -10.453 1.00120.04 C
ATOM 22 N2 G B 357 72.216 95.847 -11.165 1.00119.13 N
ATOM 23 N3 G B 357 71.838 97.218 -9.344 1.00120.30 N
ATOM 24 C4 G B 357 72.271 98.355 -8.751 1.00120.67 C
ATOM 25 P G B 358 73.176 95.618 -3.666 1.00121.54 P
ATOM 26 OP1 G B 358 73.022 94.700 -2.503 1.00120.96 O
ATOM 27 OP2 G B 358 74.345 96.536 -3.727 1.00121.25 O
ATOM 28 O5' G B 358 73.181 94.747 -5.001 1.00121.31 O
TER
ATOM 2 P A A 260 73.664 98.094 7.315 1.00 95.44 P
ATOM 3 OP1 A A 260 73.720 99.536 6.952 1.00 95.13 O
ATOM 4 OP2 A A 260 72.973 97.678 8.563 1.00 96.53 O
ATOM 5 O5' A A 260 72.982 97.313 6.111 1.00 96.49 O
ATOM 6 C5' A A 260 73.779 96.867 5.008 1.00 98.60 C
ATOM 7 C4' A A 260 72.917 96.210 3.969 1.00 99.77 C
ATOM 8 O4' A A 260 71.846 97.117 3.616 1.00101.10 O
ATOM 9 C3' A A 260 73.645 95.924 2.664 1.00 99.95 C
ATOM 10 O3' A A 260 74.285 94.635 2.690 1.00 97.39 O
ATOM 11 C2' A A 260 72.504 95.943 1.642 1.00102.15 C
ATOM 12 O2' A A 260 71.804 94.716 1.549 1.00103.10 O
ATOM 13 C1' A A 260 71.552 96.986 2.241 1.00103.12 C
ATOM 14 N9 A A 260 71.551 98.316 1.633 1.00105.33 N
ATOM 15 C8 A A 260 72.376 99.384 1.895 1.00106.45 C
ATOM 16 N7 A A 260 72.083 100.460 1.203 1.00107.52 N
ATOM 17 C5 A A 260 70.999 100.072 0.426 1.00108.23 C
ATOM 18 C6 A A 260 70.213 100.761 -0.530 1.00109.55 C
ATOM 19 N6 A A 260 70.405 102.043 -0.873 1.00109.13 N
ATOM 20 N1 A A 260 69.208 100.076 -1.126 1.00109.84 N
ATOM 21 C2 A A 260 69.012 98.793 -0.780 1.00108.92 C
ATOM 22 N3 A A 260 69.677 98.043 0.100 1.00107.69 N
ATOM 23 C4 A A 260 70.667 98.750 0.674 1.00106.95 C
ATOM 24 P G A 261 75.731 94.439 3.388 1.00 94.96 P
ATOM 25 OP1 G A 261 76.123 93.006 3.233 1.00 94.51 O
ATOM 26 OP2 G A 261 75.704 95.038 4.744 1.00 94.70 O
ATOM 27 O5' G A 261 76.741 95.295 2.506 1.00 91.41 O
TER
ATOM 1 O3' C B 356 71.842 102.635 -3.327 1.00117.98 O
ATOM 2 P G B 357 73.107 101.638 -3.337 1.00118.08 P
ATOM 3 OP1 G B 357 73.477 101.374 -1.921 1.00116.98 O
ATOM 4 OP2 G B 357 74.134 102.177 -4.274 1.00116.73 O
ATOM 5 O5' G B 357 72.521 100.291 -3.965 1.00118.80 O
ATOM 6 C5' G B 357 71.307 99.694 -3.449 1.00119.23 C
ATOM 7 C4' G B 357 70.783 98.636 -4.399 1.00119.91 C
ATOM 8 O4' G B 357 70.456 99.247 -5.678 1.00119.95 O
ATOM 9 C3' G B 357 71.749 97.521 -4.770 1.00120.28 C
ATOM 10 O3' G B 357 71.833 96.499 -3.781 1.00120.98 O
ATOM 11 C2' G B 357 71.158 97.015 -6.076 1.00120.06 C
ATOM 12 O2' G B 357 70.027 96.190 -5.876 1.00119.62 O
ATOM 13 C1' G B 357 70.732 98.331 -6.732 1.00120.32 C
ATOM 14 N9 G B 357 71.788 98.892 -7.575 1.00120.53 N
ATOM 15 C8 G B 357 72.513 100.042 -7.352 1.00120.38 C
ATOM 16 N7 G B 357 73.413 100.269 -8.270 1.00120.39 N
ATOM 17 C5 G B 357 73.276 99.209 -9.159 1.00120.67 C
ATOM 18 C6 G B 357 73.994 98.905 -10.352 1.00120.31 C
ATOM 19 O6 G B 357 74.925 99.530 -10.876 1.00119.61 O
ATOM 20 N1 G B 357 73.529 97.733 -10.943 1.00120.28 N
ATOM 21 C2 G B 357 72.512 96.948 -10.453 1.00120.04 C
ATOM 22 N2 G B 357 72.216 95.847 -11.165 1.00119.13 N
ATOM 23 N3 G B 357 71.838 97.218 -9.344 1.00120.30 N
ATOM 24 C4 G B 357 72.271 98.355 -8.751 1.00120.67 C
ATOM 25 P G B 358 73.176 95.618 -3.666 1.00121.54 P
ATOM 26 OP1 G B 358 73.022 94.700 -2.503 1.00120.96 O
ATOM 27 OP2 G B 358 74.345 96.536 -3.727 1.00121.25 O
ATOM 28 O5' G B 358 73.181 94.747 -5.001 1.00121.31 O
TER
Atoms:
OP1: (73.720,99.536,6.952)
OP2: (72.973,97.678,8.563)
C3': (73.645,95.924,2.664)
C1': (71.552,96.986,2.241)
C5': (73.779,96.867,5.008)
O4': (71.846,97.117,3.616)
C8: (72.376,99.384,1.895)
O2': (71.804,94.716,1.549)
C6: (70.213,100.761,-0.530)
C5: (70.999,100.072,0.426)
C4: (70.667,98.750,0.674)
P: (73.664,98.094,7.315)
C4': (72.917,96.210,3.969)
C2': (72.504,95.943,1.642)
C2: (69.012,98.793,-0.780)
N1: (69.208,100.076,-1.126)
N3: (69.677,98.043,0.100)
N6: (70.405,102.043,-0.873)
N7: (72.083,100.460,1.203)
N9: (71.551,98.316,1.633)
O5': (72.982,97.313,6.111)
O3': (74.285,94.635,2.690)
OP2: (72.973,97.678,8.563)
C3': (73.645,95.924,2.664)
C1': (71.552,96.986,2.241)
C5': (73.779,96.867,5.008)
O4': (71.846,97.117,3.616)
C8: (72.376,99.384,1.895)
O2': (71.804,94.716,1.549)
C6: (70.213,100.761,-0.530)
C5: (70.999,100.072,0.426)
C4: (70.667,98.750,0.674)
P: (73.664,98.094,7.315)
C4': (72.917,96.210,3.969)
C2': (72.504,95.943,1.642)
C2: (69.012,98.793,-0.780)
N1: (69.208,100.076,-1.126)
N3: (69.677,98.043,0.100)
N6: (70.405,102.043,-0.873)
N7: (72.083,100.460,1.203)
N9: (71.551,98.316,1.633)
O5': (72.982,97.313,6.111)
O3': (74.285,94.635,2.690)
OP1: (73.477,101.374,-1.921)
OP2: (74.134,102.177,-4.274)
C3': (71.749,97.521,-4.770)
C1': (70.732,98.331,-6.732)
C5': (71.307,99.694,-3.449)
O6: (74.925,99.530,-10.876)
O4': (70.456,99.247,-5.678)
C8: (72.513,100.042,-7.352)
C2: (72.512,96.948,-10.453)
C6: (73.994,98.905,-10.352)
C5: (73.276,99.209,-9.159)
C4: (72.271,98.355,-8.751)
P: (73.107,101.638,-3.337)
C4': (70.783,98.636,-4.399)
C2': (71.158,97.015,-6.076)
O2': (70.027,96.190,-5.876)
N1: (73.529,97.733,-10.943)
N2: (72.216,95.847,-11.165)
N3: (71.838,97.218,-9.344)
N7: (73.413,100.269,-8.270)
N9: (71.788,98.892,-7.575)
O5': (72.521,100.291,-3.965)
O3': (71.833,96.499,-3.781)
OP2: (74.134,102.177,-4.274)
C3': (71.749,97.521,-4.770)
C1': (70.732,98.331,-6.732)
C5': (71.307,99.694,-3.449)
O6: (74.925,99.530,-10.876)
O4': (70.456,99.247,-5.678)
C8: (72.513,100.042,-7.352)
C2: (72.512,96.948,-10.453)
C6: (73.994,98.905,-10.352)
C5: (73.276,99.209,-9.159)
C4: (72.271,98.355,-8.751)
P: (73.107,101.638,-3.337)
C4': (70.783,98.636,-4.399)
C2': (71.158,97.015,-6.076)
O2': (70.027,96.190,-5.876)
N1: (73.529,97.733,-10.943)
N2: (72.216,95.847,-11.165)
N3: (71.838,97.218,-9.344)
N7: (73.413,100.269,-8.270)
N9: (71.788,98.892,-7.575)
O5': (72.521,100.291,-3.965)
O3': (71.833,96.499,-3.781)
Image (generated by PyMOL):