Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01351:01352
Extra
PDB:
ATOM 1 O3' G A1350 41.956 178.971 83.983 1.00 52.68 O
ATOM 2 P A A1351 42.911 179.985 84.796 1.00 55.10 P
ATOM 3 OP1 A A1351 42.732 179.695 86.238 1.00 53.09 O
ATOM 4 OP2 A A1351 42.694 181.372 84.298 1.00 55.02 O
ATOM 5 O5' A A1351 44.380 179.522 84.386 1.00 54.52 O
ATOM 6 C5' A A1351 44.725 178.128 84.383 1.00 52.37 C
ATOM 7 C4' A A1351 46.209 177.950 84.542 1.00 50.94 C
ATOM 8 O4' A A1351 46.879 178.266 83.291 1.00 52.10 O
ATOM 9 C3' A A1351 46.867 178.812 85.610 1.00 50.88 C
ATOM 10 O3' A A1351 47.822 178.028 86.300 1.00 51.96 O
ATOM 11 C2' A A1351 47.558 179.895 84.784 1.00 51.42 C
ATOM 12 O2' A A1351 48.705 180.442 85.388 1.00 53.57 O
ATOM 13 C1' A A1351 47.984 179.099 83.560 1.00 51.75 C
ATOM 14 N9 A A1351 48.310 179.887 82.365 1.00 50.76 N
ATOM 15 C8 A A1351 48.037 181.207 82.102 1.00 50.23 C
ATOM 16 N7 A A1351 48.492 181.620 80.946 1.00 49.12 N
ATOM 17 C5 A A1351 49.098 180.499 80.405 1.00 48.56 C
ATOM 18 C6 A A1351 49.767 180.280 79.190 1.00 48.42 C
ATOM 19 N6 A A1351 49.940 181.217 78.258 1.00 48.21 N
ATOM 20 N1 A A1351 50.261 179.047 78.957 1.00 48.08 N
ATOM 21 C2 A A1351 50.085 178.104 79.884 1.00 49.25 C
ATOM 22 N3 A A1351 49.470 178.184 81.061 1.00 50.17 N
ATOM 23 C4 A A1351 48.993 179.424 81.264 1.00 49.67 C
ATOM 24 P A A1352 47.382 177.260 87.639 1.00 54.74 P
ATOM 25 OP1 A A1352 46.868 175.933 87.233 1.00 54.38 O
ATOM 26 OP2 A A1352 46.518 178.175 88.435 1.00 52.85 O
ATOM 27 O5' A A1352 48.740 177.034 88.435 1.00 52.49 O
TER
ATOM 1 O3' A B1351 47.822 178.028 86.300 1.00 51.96 O
ATOM 2 P A B1352 47.382 177.260 87.639 1.00 54.74 P
ATOM 3 OP1 A B1352 46.868 175.933 87.233 1.00 54.38 O
ATOM 4 OP2 A B1352 46.518 178.175 88.435 1.00 52.85 O
ATOM 5 O5' A B1352 48.740 177.034 88.435 1.00 52.49 O
ATOM 6 C5' A B1352 49.415 178.134 89.064 1.00 50.70 C
ATOM 7 C4' A B1352 50.880 177.818 89.234 1.00 48.60 C
ATOM 8 O4' A B1352 51.055 176.753 90.200 1.00 48.26 O
ATOM 9 C3' A B1352 51.558 177.310 87.981 1.00 47.37 C
ATOM 10 O3' A B1352 51.947 178.401 87.174 1.00 47.33 O
ATOM 11 C2' A B1352 52.740 176.537 88.540 1.00 46.83 C
ATOM 12 O2' A B1352 53.785 177.398 88.927 1.00 47.93 O
ATOM 13 C1' A B1352 52.124 175.915 89.796 1.00 46.98 C
ATOM 14 N9 A B1352 51.596 174.559 89.626 1.00 45.45 N
ATOM 15 C8 A B1352 50.279 174.177 89.671 1.00 44.73 C
ATOM 16 N7 A B1352 50.096 172.891 89.514 1.00 45.18 N
ATOM 17 C5 A B1352 51.378 172.389 89.351 1.00 44.28 C
ATOM 18 C6 A B1352 51.858 171.092 89.149 1.00 43.44 C
ATOM 19 N6 A B1352 51.075 170.019 89.093 1.00 43.39 N
ATOM 20 N1 A B1352 53.187 170.930 89.011 1.00 43.56 N
ATOM 21 C2 A B1352 53.974 172.005 89.086 1.00 43.91 C
ATOM 22 N3 A B1352 53.644 173.275 89.282 1.00 44.05 N
ATOM 23 C4 A B1352 52.313 173.404 89.409 1.00 44.65 C
ATOM 24 P C B1353 51.615 178.383 85.609 1.00 49.82 P
ATOM 25 OP1 C B1353 51.734 179.777 85.123 1.00 49.70 O
ATOM 26 OP2 C B1353 50.338 177.631 85.404 1.00 46.29 O
ATOM 27 O5' C B1353 52.828 177.562 84.989 1.00 46.51 O
TER
ATOM 2 P A A1351 42.911 179.985 84.796 1.00 55.10 P
ATOM 3 OP1 A A1351 42.732 179.695 86.238 1.00 53.09 O
ATOM 4 OP2 A A1351 42.694 181.372 84.298 1.00 55.02 O
ATOM 5 O5' A A1351 44.380 179.522 84.386 1.00 54.52 O
ATOM 6 C5' A A1351 44.725 178.128 84.383 1.00 52.37 C
ATOM 7 C4' A A1351 46.209 177.950 84.542 1.00 50.94 C
ATOM 8 O4' A A1351 46.879 178.266 83.291 1.00 52.10 O
ATOM 9 C3' A A1351 46.867 178.812 85.610 1.00 50.88 C
ATOM 10 O3' A A1351 47.822 178.028 86.300 1.00 51.96 O
ATOM 11 C2' A A1351 47.558 179.895 84.784 1.00 51.42 C
ATOM 12 O2' A A1351 48.705 180.442 85.388 1.00 53.57 O
ATOM 13 C1' A A1351 47.984 179.099 83.560 1.00 51.75 C
ATOM 14 N9 A A1351 48.310 179.887 82.365 1.00 50.76 N
ATOM 15 C8 A A1351 48.037 181.207 82.102 1.00 50.23 C
ATOM 16 N7 A A1351 48.492 181.620 80.946 1.00 49.12 N
ATOM 17 C5 A A1351 49.098 180.499 80.405 1.00 48.56 C
ATOM 18 C6 A A1351 49.767 180.280 79.190 1.00 48.42 C
ATOM 19 N6 A A1351 49.940 181.217 78.258 1.00 48.21 N
ATOM 20 N1 A A1351 50.261 179.047 78.957 1.00 48.08 N
ATOM 21 C2 A A1351 50.085 178.104 79.884 1.00 49.25 C
ATOM 22 N3 A A1351 49.470 178.184 81.061 1.00 50.17 N
ATOM 23 C4 A A1351 48.993 179.424 81.264 1.00 49.67 C
ATOM 24 P A A1352 47.382 177.260 87.639 1.00 54.74 P
ATOM 25 OP1 A A1352 46.868 175.933 87.233 1.00 54.38 O
ATOM 26 OP2 A A1352 46.518 178.175 88.435 1.00 52.85 O
ATOM 27 O5' A A1352 48.740 177.034 88.435 1.00 52.49 O
TER
ATOM 1 O3' A B1351 47.822 178.028 86.300 1.00 51.96 O
ATOM 2 P A B1352 47.382 177.260 87.639 1.00 54.74 P
ATOM 3 OP1 A B1352 46.868 175.933 87.233 1.00 54.38 O
ATOM 4 OP2 A B1352 46.518 178.175 88.435 1.00 52.85 O
ATOM 5 O5' A B1352 48.740 177.034 88.435 1.00 52.49 O
ATOM 6 C5' A B1352 49.415 178.134 89.064 1.00 50.70 C
ATOM 7 C4' A B1352 50.880 177.818 89.234 1.00 48.60 C
ATOM 8 O4' A B1352 51.055 176.753 90.200 1.00 48.26 O
ATOM 9 C3' A B1352 51.558 177.310 87.981 1.00 47.37 C
ATOM 10 O3' A B1352 51.947 178.401 87.174 1.00 47.33 O
ATOM 11 C2' A B1352 52.740 176.537 88.540 1.00 46.83 C
ATOM 12 O2' A B1352 53.785 177.398 88.927 1.00 47.93 O
ATOM 13 C1' A B1352 52.124 175.915 89.796 1.00 46.98 C
ATOM 14 N9 A B1352 51.596 174.559 89.626 1.00 45.45 N
ATOM 15 C8 A B1352 50.279 174.177 89.671 1.00 44.73 C
ATOM 16 N7 A B1352 50.096 172.891 89.514 1.00 45.18 N
ATOM 17 C5 A B1352 51.378 172.389 89.351 1.00 44.28 C
ATOM 18 C6 A B1352 51.858 171.092 89.149 1.00 43.44 C
ATOM 19 N6 A B1352 51.075 170.019 89.093 1.00 43.39 N
ATOM 20 N1 A B1352 53.187 170.930 89.011 1.00 43.56 N
ATOM 21 C2 A B1352 53.974 172.005 89.086 1.00 43.91 C
ATOM 22 N3 A B1352 53.644 173.275 89.282 1.00 44.05 N
ATOM 23 C4 A B1352 52.313 173.404 89.409 1.00 44.65 C
ATOM 24 P C B1353 51.615 178.383 85.609 1.00 49.82 P
ATOM 25 OP1 C B1353 51.734 179.777 85.123 1.00 49.70 O
ATOM 26 OP2 C B1353 50.338 177.631 85.404 1.00 46.29 O
ATOM 27 O5' C B1353 52.828 177.562 84.989 1.00 46.51 O
TER
Atoms:
OP1: (42.732,179.695,86.238)
OP2: (42.694,181.372,84.298)
C3': (46.867,178.812,85.610)
C1': (47.984,179.099,83.560)
C5': (44.725,178.128,84.383)
O4': (46.879,178.266,83.291)
C8: (48.037,181.207,82.102)
O2': (48.705,180.442,85.388)
C6: (49.767,180.280,79.190)
C5: (49.098,180.499,80.405)
C4: (48.993,179.424,81.264)
P: (42.911,179.985,84.796)
C4': (46.209,177.950,84.542)
C2': (47.558,179.895,84.784)
C2: (50.085,178.104,79.884)
N1: (50.261,179.047,78.957)
N3: (49.470,178.184,81.061)
N6: (49.940,181.217,78.258)
N7: (48.492,181.620,80.946)
N9: (48.310,179.887,82.365)
O5': (44.380,179.522,84.386)
O3': (47.822,178.028,86.300)
OP2: (42.694,181.372,84.298)
C3': (46.867,178.812,85.610)
C1': (47.984,179.099,83.560)
C5': (44.725,178.128,84.383)
O4': (46.879,178.266,83.291)
C8: (48.037,181.207,82.102)
O2': (48.705,180.442,85.388)
C6: (49.767,180.280,79.190)
C5: (49.098,180.499,80.405)
C4: (48.993,179.424,81.264)
P: (42.911,179.985,84.796)
C4': (46.209,177.950,84.542)
C2': (47.558,179.895,84.784)
C2: (50.085,178.104,79.884)
N1: (50.261,179.047,78.957)
N3: (49.470,178.184,81.061)
N6: (49.940,181.217,78.258)
N7: (48.492,181.620,80.946)
N9: (48.310,179.887,82.365)
O5': (44.380,179.522,84.386)
O3': (47.822,178.028,86.300)
OP1: (46.868,175.933,87.233)
OP2: (46.518,178.175,88.435)
C3': (51.558,177.310,87.981)
C1': (52.124,175.915,89.796)
C5': (49.415,178.134,89.064)
O4': (51.055,176.753,90.200)
C8: (50.279,174.177,89.671)
O2': (53.785,177.398,88.927)
C6: (51.858,171.092,89.149)
C5: (51.378,172.389,89.351)
C4: (52.313,173.404,89.409)
P: (47.382,177.260,87.639)
C4': (50.880,177.818,89.234)
C2': (52.740,176.537,88.540)
C2: (53.974,172.005,89.086)
N1: (53.187,170.930,89.011)
N3: (53.644,173.275,89.282)
N6: (51.075,170.019,89.093)
N7: (50.096,172.891,89.514)
N9: (51.596,174.559,89.626)
O5': (48.740,177.034,88.435)
O3': (51.947,178.401,87.174)
OP2: (46.518,178.175,88.435)
C3': (51.558,177.310,87.981)
C1': (52.124,175.915,89.796)
C5': (49.415,178.134,89.064)
O4': (51.055,176.753,90.200)
C8: (50.279,174.177,89.671)
O2': (53.785,177.398,88.927)
C6: (51.858,171.092,89.149)
C5: (51.378,172.389,89.351)
C4: (52.313,173.404,89.409)
P: (47.382,177.260,87.639)
C4': (50.880,177.818,89.234)
C2': (52.740,176.537,88.540)
C2: (53.974,172.005,89.086)
N1: (53.187,170.930,89.011)
N3: (53.644,173.275,89.282)
N6: (51.075,170.019,89.093)
N7: (50.096,172.891,89.514)
N9: (51.596,174.559,89.626)
O5': (48.740,177.034,88.435)
O3': (51.947,178.401,87.174)
Image (generated by PyMOL):