ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A1291:A1292

Extra

PDB:
ATOM 1 O3' U A1290 -9.550 -54.910 32.562 1.00 17.16 O
ATOM 2 P A A1291 -10.166 -53.775 33.526 1.00 19.49 P
ATOM 3 OP1 A A1291 -9.473 -53.951 34.827 1.00 38.49 O
ATOM 4 OP2 A A1291 -11.658 -53.806 33.487 1.00 38.61 O
ATOM 5 O5' A A1291 -9.659 -52.410 32.885 1.00 13.35 O
ATOM 6 C5' A A1291 -8.259 -52.159 32.729 1.00 13.35 C
ATOM 7 C4' A A1291 -8.012 -50.744 32.237 1.00 13.35 C
ATOM 8 O4' A A1291 -8.714 -50.537 30.979 1.00 13.35 O
ATOM 9 C3' A A1291 -8.429 -49.602 33.153 1.00 13.35 C
ATOM 10 O3' A A1291 -7.493 -48.537 33.015 1.00 13.35 O
ATOM 11 C2' A A1291 -9.754 -49.149 32.549 1.00 13.35 C
ATOM 12 O2' A A1291 -10.052 -47.793 32.828 1.00 13.35 O
ATOM 13 C1' A A1291 -9.511 -49.379 31.057 1.00 13.35 C
ATOM 14 N9 A A1291 -10.717 -49.615 30.270 1.00 10.93 N
ATOM 15 C8 A A1291 -11.725 -50.516 30.509 1.00 10.93 C
ATOM 16 N7 A A1291 -12.680 -50.496 29.609 1.00 10.85 N
ATOM 17 C5 A A1291 -12.272 -49.514 28.721 1.00 10.88 C
ATOM 18 C6 A A1291 -12.850 -49.008 27.548 1.00 10.89 C
ATOM 19 N6 A A1291 -14.001 -49.451 27.037 1.00 10.88 N
ATOM 20 N1 A A1291 -12.196 -48.025 26.906 1.00 10.86 N
ATOM 21 C2 A A1291 -11.029 -47.601 27.409 1.00 10.75 C
ATOM 22 N3 A A1291 -10.380 -48.002 28.497 1.00 10.74 N
ATOM 23 C4 A A1291 -11.065 -48.966 29.118 1.00 10.87 C
ATOM 24 P G A1292 -6.363 -48.316 34.130 1.00 28.03 P
ATOM 25 OP1 G A1292 -5.082 -48.295 33.390 1.00 57.67 O
ATOM 26 OP2 G A1292 -6.566 -49.287 35.241 1.00 57.56 O
ATOM 27 O5' G A1292 -6.625 -46.851 34.707 1.00 17.45 O
TER

ATOM 1 O3' A B1291 -7.493 -48.537 33.015 1.00 13.35 O
ATOM 2 P G B1292 -6.363 -48.316 34.130 1.00 28.03 P
ATOM 3 OP1 G B1292 -5.082 -48.295 33.390 1.00 57.67 O
ATOM 4 OP2 G B1292 -6.566 -49.287 35.241 1.00 57.56 O
ATOM 5 O5' G B1292 -6.625 -46.851 34.707 1.00 17.45 O
ATOM 6 C5' G B1292 -7.685 -46.597 35.660 1.00 17.45 C
ATOM 7 C4' G B1292 -7.825 -45.108 35.906 1.00 17.45 C
ATOM 8 O4' G B1292 -6.644 -44.606 36.582 1.00 17.45 O
ATOM 9 C3' G B1292 -7.958 -44.254 34.655 1.00 17.45 C
ATOM 10 O3' G B1292 -9.315 -44.193 34.221 1.00 17.45 O
ATOM 11 C2' G B1292 -7.430 -42.905 35.119 1.00 17.45 C
ATOM 12 O2' G B1292 -8.412 -42.168 35.820 1.00 17.45 O
ATOM 13 C1' G B1292 -6.322 -43.319 36.094 1.00 17.45 C
ATOM 14 N9 G B1292 -4.988 -43.398 35.503 1.00 25.46 N
ATOM 15 C8 G B1292 -4.070 -44.397 35.712 1.00 25.46 C
ATOM 16 N7 G B1292 -2.960 -44.220 35.053 1.00 25.45 N
ATOM 17 C5 G B1292 -3.153 -43.032 34.363 1.00 25.40 C
ATOM 18 C6 G B1292 -2.288 -42.333 33.478 1.00 25.34 C
ATOM 19 O6 G B1292 -1.147 -42.637 33.118 1.00 25.28 O
ATOM 20 N1 G B1292 -2.875 -41.170 33.000 1.00 25.46 N
ATOM 21 C2 G B1292 -4.126 -40.733 33.326 1.00 25.49 C
ATOM 22 N2 G B1292 -4.502 -39.589 32.752 1.00 25.44 N
ATOM 23 N3 G B1292 -4.945 -41.369 34.150 1.00 25.49 N
ATOM 24 C4 G B1292 -4.397 -42.507 34.629 1.00 25.48 C
ATOM 25 P G B1293 -9.689 -44.601 32.712 1.00 31.83 P
ATOM 26 OP1 G B1293 -11.172 -44.766 32.654 1.00 47.24 O
ATOM 27 OP2 G B1293 -8.803 -45.724 32.304 1.00 46.95 O
ATOM 28 O5' G B1293 -9.243 -43.339 31.857 1.00 13.47 O
TER

Atoms:
OP1: (-9.473,-53.951,34.827)
OP2: (-11.658,-53.806,33.487)
C3': (-8.429,-49.602,33.153)
C1': (-9.511,-49.379,31.057)
C5': (-8.259,-52.159,32.729)
O4': (-8.714,-50.537,30.979)
C8: (-11.725,-50.516,30.509)
O2': (-10.052,-47.793,32.828)
C6: (-12.850,-49.008,27.548)
C5: (-12.272,-49.514,28.721)
C4: (-11.065,-48.966,29.118)
P: (-10.166,-53.775,33.526)
C4': (-8.012,-50.744,32.237)
C2': (-9.754,-49.149,32.549)
C2: (-11.029,-47.601,27.409)
N1: (-12.196,-48.025,26.906)
N3: (-10.380,-48.002,28.497)
N6: (-14.001,-49.451,27.037)
N7: (-12.680,-50.496,29.609)
N9: (-10.717,-49.615,30.270)
O5': (-9.659,-52.410,32.885)
O3': (-7.493,-48.537,33.015)
OP1: (-5.082,-48.295,33.390)
OP2: (-6.566,-49.287,35.241)
C3': (-7.958,-44.254,34.655)
C1': (-6.322,-43.319,36.094)
C5': (-7.685,-46.597,35.660)
O6: (-1.147,-42.637,33.118)
O4': (-6.644,-44.606,36.582)
C8: (-4.070,-44.397,35.712)
C2: (-4.126,-40.733,33.326)
C6: (-2.288,-42.333,33.478)
C5: (-3.153,-43.032,34.363)
C4: (-4.397,-42.507,34.629)
P: (-6.363,-48.316,34.130)
C4': (-7.825,-45.108,35.906)
C2': (-7.430,-42.905,35.119)
O2': (-8.412,-42.168,35.820)
N1: (-2.875,-41.170,33.000)
N2: (-4.502,-39.589,32.752)
N3: (-4.945,-41.369,34.150)
N7: (-2.960,-44.220,35.053)
N9: (-4.988,-43.398,35.503)
O5': (-6.625,-46.851,34.707)
O3': (-9.315,-44.193,34.221)
Image (generated by PyMOL):
PyMOL image
show in jmol