Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A1235:A1236
Extra
PDB:
ATOM 1 O3' G A1234 -29.042 -90.101 -0.073 1.00 25.27 O
ATOM 2 P A A1235 -28.568 -89.040 -1.155 1.00 42.96 P
ATOM 3 OP1 A A1235 -29.402 -89.292 -2.357 1.00 12.55 O
ATOM 4 OP2 A A1235 -27.090 -89.011 -1.268 1.00 12.55 O
ATOM 5 O5' A A1235 -29.041 -87.660 -0.554 1.00 71.58 O
ATOM 6 C5' A A1235 -29.253 -86.545 -1.407 1.00 71.58 C
ATOM 7 C4' A A1235 -29.528 -85.348 -0.573 1.00 71.58 C
ATOM 8 O4' A A1235 -28.493 -85.230 0.404 1.00 71.58 O
ATOM 9 C3' A A1235 -29.570 -84.030 -1.306 1.00 71.58 C
ATOM 10 O3' A A1235 -30.944 -83.885 -1.653 1.00 71.58 O
ATOM 11 C2' A A1235 -29.168 -83.026 -0.219 1.00 71.58 C
ATOM 12 O2' A A1235 -30.271 -82.490 0.486 1.00 71.58 O
ATOM 13 C1' A A1235 -28.374 -83.890 0.768 1.00 71.58 C
ATOM 14 N9 A A1235 -26.966 -83.618 0.996 1.00 13.09 N
ATOM 15 C8 A A1235 -25.889 -84.069 0.288 1.00 13.09 C
ATOM 16 N7 A A1235 -24.735 -83.743 0.823 1.00 13.09 N
ATOM 17 C5 A A1235 -25.085 -83.005 1.943 1.00 13.09 C
ATOM 18 C6 A A1235 -24.325 -82.384 2.935 1.00 13.09 C
ATOM 19 N6 A A1235 -22.991 -82.399 2.959 1.00 13.09 N
ATOM 20 N1 A A1235 -24.982 -81.731 3.915 1.00 13.09 N
ATOM 21 C2 A A1235 -26.307 -81.705 3.884 1.00 13.09 C
ATOM 22 N3 A A1235 -27.136 -82.246 3.000 1.00 13.09 N
ATOM 23 C4 A A1235 -26.452 -82.896 2.045 1.00 13.09 C
ATOM 24 P A A1236 -31.382 -83.695 -3.179 1.00 19.62 P
ATOM 25 OP1 A A1236 -32.858 -83.703 -3.177 1.00 13.49 O
ATOM 26 OP2 A A1236 -30.652 -84.639 -4.064 1.00 13.49 O
ATOM 27 O5' A A1236 -30.920 -82.204 -3.468 1.00 25.16 O
TER
ATOM 1 O3' A B1235 -30.944 -83.885 -1.653 1.00 71.58 O
ATOM 2 P A B1236 -31.382 -83.695 -3.179 1.00 19.62 P
ATOM 3 OP1 A B1236 -32.858 -83.703 -3.177 1.00 13.49 O
ATOM 4 OP2 A B1236 -30.652 -84.639 -4.064 1.00 13.49 O
ATOM 5 O5' A B1236 -30.920 -82.204 -3.468 1.00 25.16 O
ATOM 6 C5' A B1236 -30.154 -81.853 -4.627 1.00 25.16 C
ATOM 7 C4' A B1236 -30.322 -80.383 -4.901 1.00 25.16 C
ATOM 8 O4' A B1236 -31.659 -80.173 -5.384 1.00 25.16 O
ATOM 9 C3' A B1236 -30.201 -79.524 -3.653 1.00 25.16 C
ATOM 10 O3' A B1236 -28.851 -79.107 -3.485 1.00 25.16 O
ATOM 11 C2' A B1236 -31.107 -78.344 -3.954 1.00 25.16 C
ATOM 12 O2' A B1236 -30.416 -77.390 -4.725 1.00 25.16 O
ATOM 13 C1' A B1236 -32.177 -78.981 -4.842 1.00 25.16 C
ATOM 14 N9 A B1236 -33.503 -79.258 -4.277 1.00 24.97 N
ATOM 15 C8 A B1236 -34.320 -80.328 -4.584 1.00 24.97 C
ATOM 16 N7 A B1236 -35.494 -80.280 -4.009 1.00 24.97 N
ATOM 17 C5 A B1236 -35.448 -79.112 -3.255 1.00 24.97 C
ATOM 18 C6 A B1236 -36.391 -78.488 -2.410 1.00 24.97 C
ATOM 19 N6 A B1236 -37.620 -78.954 -2.189 1.00 24.97 N
ATOM 20 N1 A B1236 -36.019 -77.353 -1.796 1.00 24.97 N
ATOM 21 C2 A B1236 -34.788 -76.876 -2.020 1.00 24.97 C
ATOM 22 N3 A B1236 -33.819 -77.358 -2.792 1.00 24.97 N
ATOM 23 C4 A B1236 -34.216 -78.488 -3.391 1.00 24.97 C
ATOM 24 P U B1237 -28.031 -79.569 -2.179 1.00 14.67 P
ATOM 25 OP1 U B1237 -26.627 -79.112 -2.382 1.00 35.76 O
ATOM 26 OP2 U B1237 -28.322 -81.004 -1.933 1.00 35.76 O
ATOM 27 O5' U B1237 -28.666 -78.700 -1.010 1.00 2.45 O
TER
ATOM 2 P A A1235 -28.568 -89.040 -1.155 1.00 42.96 P
ATOM 3 OP1 A A1235 -29.402 -89.292 -2.357 1.00 12.55 O
ATOM 4 OP2 A A1235 -27.090 -89.011 -1.268 1.00 12.55 O
ATOM 5 O5' A A1235 -29.041 -87.660 -0.554 1.00 71.58 O
ATOM 6 C5' A A1235 -29.253 -86.545 -1.407 1.00 71.58 C
ATOM 7 C4' A A1235 -29.528 -85.348 -0.573 1.00 71.58 C
ATOM 8 O4' A A1235 -28.493 -85.230 0.404 1.00 71.58 O
ATOM 9 C3' A A1235 -29.570 -84.030 -1.306 1.00 71.58 C
ATOM 10 O3' A A1235 -30.944 -83.885 -1.653 1.00 71.58 O
ATOM 11 C2' A A1235 -29.168 -83.026 -0.219 1.00 71.58 C
ATOM 12 O2' A A1235 -30.271 -82.490 0.486 1.00 71.58 O
ATOM 13 C1' A A1235 -28.374 -83.890 0.768 1.00 71.58 C
ATOM 14 N9 A A1235 -26.966 -83.618 0.996 1.00 13.09 N
ATOM 15 C8 A A1235 -25.889 -84.069 0.288 1.00 13.09 C
ATOM 16 N7 A A1235 -24.735 -83.743 0.823 1.00 13.09 N
ATOM 17 C5 A A1235 -25.085 -83.005 1.943 1.00 13.09 C
ATOM 18 C6 A A1235 -24.325 -82.384 2.935 1.00 13.09 C
ATOM 19 N6 A A1235 -22.991 -82.399 2.959 1.00 13.09 N
ATOM 20 N1 A A1235 -24.982 -81.731 3.915 1.00 13.09 N
ATOM 21 C2 A A1235 -26.307 -81.705 3.884 1.00 13.09 C
ATOM 22 N3 A A1235 -27.136 -82.246 3.000 1.00 13.09 N
ATOM 23 C4 A A1235 -26.452 -82.896 2.045 1.00 13.09 C
ATOM 24 P A A1236 -31.382 -83.695 -3.179 1.00 19.62 P
ATOM 25 OP1 A A1236 -32.858 -83.703 -3.177 1.00 13.49 O
ATOM 26 OP2 A A1236 -30.652 -84.639 -4.064 1.00 13.49 O
ATOM 27 O5' A A1236 -30.920 -82.204 -3.468 1.00 25.16 O
TER
ATOM 1 O3' A B1235 -30.944 -83.885 -1.653 1.00 71.58 O
ATOM 2 P A B1236 -31.382 -83.695 -3.179 1.00 19.62 P
ATOM 3 OP1 A B1236 -32.858 -83.703 -3.177 1.00 13.49 O
ATOM 4 OP2 A B1236 -30.652 -84.639 -4.064 1.00 13.49 O
ATOM 5 O5' A B1236 -30.920 -82.204 -3.468 1.00 25.16 O
ATOM 6 C5' A B1236 -30.154 -81.853 -4.627 1.00 25.16 C
ATOM 7 C4' A B1236 -30.322 -80.383 -4.901 1.00 25.16 C
ATOM 8 O4' A B1236 -31.659 -80.173 -5.384 1.00 25.16 O
ATOM 9 C3' A B1236 -30.201 -79.524 -3.653 1.00 25.16 C
ATOM 10 O3' A B1236 -28.851 -79.107 -3.485 1.00 25.16 O
ATOM 11 C2' A B1236 -31.107 -78.344 -3.954 1.00 25.16 C
ATOM 12 O2' A B1236 -30.416 -77.390 -4.725 1.00 25.16 O
ATOM 13 C1' A B1236 -32.177 -78.981 -4.842 1.00 25.16 C
ATOM 14 N9 A B1236 -33.503 -79.258 -4.277 1.00 24.97 N
ATOM 15 C8 A B1236 -34.320 -80.328 -4.584 1.00 24.97 C
ATOM 16 N7 A B1236 -35.494 -80.280 -4.009 1.00 24.97 N
ATOM 17 C5 A B1236 -35.448 -79.112 -3.255 1.00 24.97 C
ATOM 18 C6 A B1236 -36.391 -78.488 -2.410 1.00 24.97 C
ATOM 19 N6 A B1236 -37.620 -78.954 -2.189 1.00 24.97 N
ATOM 20 N1 A B1236 -36.019 -77.353 -1.796 1.00 24.97 N
ATOM 21 C2 A B1236 -34.788 -76.876 -2.020 1.00 24.97 C
ATOM 22 N3 A B1236 -33.819 -77.358 -2.792 1.00 24.97 N
ATOM 23 C4 A B1236 -34.216 -78.488 -3.391 1.00 24.97 C
ATOM 24 P U B1237 -28.031 -79.569 -2.179 1.00 14.67 P
ATOM 25 OP1 U B1237 -26.627 -79.112 -2.382 1.00 35.76 O
ATOM 26 OP2 U B1237 -28.322 -81.004 -1.933 1.00 35.76 O
ATOM 27 O5' U B1237 -28.666 -78.700 -1.010 1.00 2.45 O
TER
Atoms:
OP1: (-29.402,-89.292,-2.357)
OP2: (-27.090,-89.011,-1.268)
C3': (-29.570,-84.030,-1.306)
C1': (-28.374,-83.890,0.768)
C5': (-29.253,-86.545,-1.407)
O4': (-28.493,-85.230,0.404)
C8: (-25.889,-84.069,0.288)
O2': (-30.271,-82.490,0.486)
C6: (-24.325,-82.384,2.935)
C5: (-25.085,-83.005,1.943)
C4: (-26.452,-82.896,2.045)
P: (-28.568,-89.040,-1.155)
C4': (-29.528,-85.348,-0.573)
C2': (-29.168,-83.026,-0.219)
C2: (-26.307,-81.705,3.884)
N1: (-24.982,-81.731,3.915)
N3: (-27.136,-82.246,3.000)
N6: (-22.991,-82.399,2.959)
N7: (-24.735,-83.743,0.823)
N9: (-26.966,-83.618,0.996)
O5': (-29.041,-87.660,-0.554)
O3': (-30.944,-83.885,-1.653)
OP2: (-27.090,-89.011,-1.268)
C3': (-29.570,-84.030,-1.306)
C1': (-28.374,-83.890,0.768)
C5': (-29.253,-86.545,-1.407)
O4': (-28.493,-85.230,0.404)
C8: (-25.889,-84.069,0.288)
O2': (-30.271,-82.490,0.486)
C6: (-24.325,-82.384,2.935)
C5: (-25.085,-83.005,1.943)
C4: (-26.452,-82.896,2.045)
P: (-28.568,-89.040,-1.155)
C4': (-29.528,-85.348,-0.573)
C2': (-29.168,-83.026,-0.219)
C2: (-26.307,-81.705,3.884)
N1: (-24.982,-81.731,3.915)
N3: (-27.136,-82.246,3.000)
N6: (-22.991,-82.399,2.959)
N7: (-24.735,-83.743,0.823)
N9: (-26.966,-83.618,0.996)
O5': (-29.041,-87.660,-0.554)
O3': (-30.944,-83.885,-1.653)
OP1: (-32.858,-83.703,-3.177)
OP2: (-30.652,-84.639,-4.064)
C3': (-30.201,-79.524,-3.653)
C1': (-32.177,-78.981,-4.842)
C5': (-30.154,-81.853,-4.627)
O4': (-31.659,-80.173,-5.384)
C8: (-34.320,-80.328,-4.584)
O2': (-30.416,-77.390,-4.725)
C6: (-36.391,-78.488,-2.410)
C5: (-35.448,-79.112,-3.255)
C4: (-34.216,-78.488,-3.391)
P: (-31.382,-83.695,-3.179)
C4': (-30.322,-80.383,-4.901)
C2': (-31.107,-78.344,-3.954)
C2: (-34.788,-76.876,-2.020)
N1: (-36.019,-77.353,-1.796)
N3: (-33.819,-77.358,-2.792)
N6: (-37.620,-78.954,-2.189)
N7: (-35.494,-80.280,-4.009)
N9: (-33.503,-79.258,-4.277)
O5': (-30.920,-82.204,-3.468)
O3': (-28.851,-79.107,-3.485)
OP2: (-30.652,-84.639,-4.064)
C3': (-30.201,-79.524,-3.653)
C1': (-32.177,-78.981,-4.842)
C5': (-30.154,-81.853,-4.627)
O4': (-31.659,-80.173,-5.384)
C8: (-34.320,-80.328,-4.584)
O2': (-30.416,-77.390,-4.725)
C6: (-36.391,-78.488,-2.410)
C5: (-35.448,-79.112,-3.255)
C4: (-34.216,-78.488,-3.391)
P: (-31.382,-83.695,-3.179)
C4': (-30.322,-80.383,-4.901)
C2': (-31.107,-78.344,-3.954)
C2: (-34.788,-76.876,-2.020)
N1: (-36.019,-77.353,-1.796)
N3: (-33.819,-77.358,-2.792)
N6: (-37.620,-78.954,-2.189)
N7: (-35.494,-80.280,-4.009)
N9: (-33.503,-79.258,-4.277)
O5': (-30.920,-82.204,-3.468)
O3': (-28.851,-79.107,-3.485)
Image (generated by PyMOL):