ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2YIE:Z35:Z36

Extra

PDB:
ATOM 1 O3' G A 34 21.118 -82.930 -71.203 1.00 80.09 O
ATOM 2 P A A 35 20.006 -81.783 -71.363 1.00 65.60 P
ATOM 3 OP1 A A 35 18.694 -82.398 -71.075 1.00 66.27 O
ATOM 4 OP2 A A 35 20.445 -80.631 -70.545 1.00 64.73 O
ATOM 5 O5' A A 35 20.099 -81.421 -72.904 1.00 64.19 O
ATOM 6 C5' A A 35 21.160 -80.618 -73.400 1.00 63.27 C
ATOM 7 C4' A A 35 20.680 -79.706 -74.491 1.00 63.13 C
ATOM 8 O4' A A 35 20.237 -80.514 -75.613 1.00 62.97 O
ATOM 9 C3' A A 35 19.495 -78.828 -74.111 1.00 64.14 C
ATOM 10 O3' A A 35 19.565 -77.609 -74.841 1.00 64.30 O
ATOM 11 C2' A A 35 18.307 -79.648 -74.593 1.00 63.41 C
ATOM 12 O2' A A 35 17.140 -78.896 -74.844 1.00 63.99 O
ATOM 13 C1' A A 35 18.866 -80.273 -75.869 1.00 62.98 C
ATOM 14 N9 A A 35 18.241 -81.548 -76.232 1.00 62.80 N
ATOM 15 C8 A A 35 17.907 -82.584 -75.397 1.00 63.44 C
ATOM 16 N7 A A 35 17.352 -83.598 -76.013 1.00 64.51 N
ATOM 17 C5 A A 35 17.321 -83.205 -77.346 1.00 65.27 C
ATOM 18 C6 A A 35 16.854 -83.845 -78.513 1.00 66.73 C
ATOM 19 N6 A A 35 16.307 -85.065 -78.523 1.00 67.71 N
ATOM 20 N1 A A 35 16.972 -83.181 -79.687 1.00 66.64 N
ATOM 21 C2 A A 35 17.521 -81.956 -79.674 1.00 64.49 C
ATOM 22 N3 A A 35 17.996 -81.253 -78.647 1.00 63.65 N
ATOM 23 C4 A A 35 17.866 -81.942 -77.496 1.00 63.77 C
ATOM 24 P G A 36 20.694 -76.526 -74.480 1.00 68.11 P
ATOM 25 OP1 G A 36 21.860 -76.792 -75.368 1.00 68.04 O
ATOM 26 OP2 G A 36 20.887 -76.577 -73.004 1.00 71.45 O
ATOM 27 O5' G A 36 20.006 -75.152 -74.886 1.00 64.80 O
TER

ATOM 1 O3' A B 35 19.565 -77.609 -74.841 1.00 64.30 O
ATOM 2 P G B 36 20.694 -76.526 -74.480 1.00 68.11 P
ATOM 3 OP1 G B 36 21.860 -76.792 -75.368 1.00 68.04 O
ATOM 4 OP2 G B 36 20.887 -76.577 -73.004 1.00 71.45 O
ATOM 5 O5' G B 36 20.006 -75.152 -74.886 1.00 64.80 O
ATOM 6 C5' G B 36 18.702 -74.827 -74.425 1.00 61.12 C
ATOM 7 C4' G B 36 18.033 -73.844 -75.343 1.00 59.96 C
ATOM 8 O4' G B 36 18.902 -72.703 -75.540 1.00 62.87 O
ATOM 9 C3' G B 36 17.727 -74.356 -76.744 1.00 57.41 C
ATOM 10 O3' G B 36 16.474 -75.015 -76.806 1.00 55.79 O
ATOM 11 C2' G B 36 17.785 -73.096 -77.601 1.00 58.65 C
ATOM 12 O2' G B 36 16.545 -72.402 -77.545 1.00 55.97 O
ATOM 13 C1' G B 36 18.837 -72.258 -76.871 1.00 60.59 C
ATOM 14 N9 G B 36 20.188 -72.368 -77.463 1.00 64.47 N
ATOM 15 C8 G B 36 21.305 -72.694 -76.734 1.00 68.06 C
ATOM 16 N7 G B 36 22.405 -72.705 -77.426 1.00 71.61 N
ATOM 17 C5 G B 36 21.995 -72.348 -78.697 1.00 71.51 C
ATOM 18 C6 G B 36 22.770 -72.194 -79.870 1.00 76.78 C
ATOM 19 O6 G B 36 23.993 -72.358 -79.994 1.00 81.24 O
ATOM 20 N1 G B 36 21.975 -71.818 -80.953 1.00 76.40 N
ATOM 21 C2 G B 36 20.615 -71.620 -80.902 1.00 72.34 C
ATOM 22 N2 G B 36 20.020 -71.260 -82.049 1.00 71.98 N
ATOM 23 N3 G B 36 19.888 -71.761 -79.806 1.00 68.03 N
ATOM 24 C4 G B 36 20.635 -72.123 -78.743 1.00 66.54 C
ATOM 25 P U B 37 16.338 -76.466 -77.474 1.00 58.31 P
ATOM 26 OP1 U B 37 15.003 -76.999 -77.087 1.00 55.27 O
ATOM 27 OP2 U B 37 17.544 -77.235 -77.097 1.00 54.88 O
ATOM 28 O5' U B 37 16.363 -76.131 -79.033 1.00 58.92 O
TER

Atoms:
OP1: (18.694,-82.398,-71.075)
OP2: (20.445,-80.631,-70.545)
C3': (19.495,-78.828,-74.111)
C1': (18.866,-80.273,-75.869)
C5': (21.160,-80.618,-73.400)
O4': (20.237,-80.514,-75.613)
C8: (17.907,-82.584,-75.397)
O2': (17.140,-78.896,-74.844)
C6: (16.854,-83.845,-78.513)
C5: (17.321,-83.205,-77.346)
C4: (17.866,-81.942,-77.496)
P: (20.006,-81.783,-71.363)
C4': (20.680,-79.706,-74.491)
C2': (18.307,-79.648,-74.593)
C2: (17.521,-81.956,-79.674)
N1: (16.972,-83.181,-79.687)
N3: (17.996,-81.253,-78.647)
N6: (16.307,-85.065,-78.523)
N7: (17.352,-83.598,-76.013)
N9: (18.241,-81.548,-76.232)
O5': (20.099,-81.421,-72.904)
O3': (19.565,-77.609,-74.841)
OP1: (21.860,-76.792,-75.368)
OP2: (20.887,-76.577,-73.004)
C3': (17.727,-74.356,-76.744)
C1': (18.837,-72.258,-76.871)
C5': (18.702,-74.827,-74.425)
O6: (23.993,-72.358,-79.994)
O4': (18.902,-72.703,-75.540)
C8: (21.305,-72.694,-76.734)
C2: (20.615,-71.620,-80.902)
C6: (22.770,-72.194,-79.870)
C5: (21.995,-72.348,-78.697)
C4: (20.635,-72.123,-78.743)
P: (20.694,-76.526,-74.480)
C4': (18.033,-73.844,-75.343)
C2': (17.785,-73.096,-77.601)
O2': (16.545,-72.402,-77.545)
N1: (21.975,-71.818,-80.953)
N2: (20.020,-71.260,-82.049)
N3: (19.888,-71.761,-79.806)
N7: (22.405,-72.705,-77.426)
N9: (20.188,-72.368,-77.463)
O5': (20.006,-75.152,-74.886)
O3': (16.474,-75.015,-76.806)
Image (generated by PyMOL):
PyMOL image
show in jmol